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PDB: 412 件
4UBR
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BU of 4ubr by Molmil
Crystal structure of Pseudomonas aeruginosa N-aetyltransferase PA4534
分子名称: GLYCEROL, Putative acetyltransferase
著者Choe, J, Shin, S.
登録日2014-08-13
公開日2015-08-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of Pseudomonas aeruginosa N-aetyltransferase PA4534
To Be Published
5ZQL
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BU of 5zql by Molmil
crystal structure of human katanin AAA ATPase domain
分子名称: Katanin p60 ATPase-containing subunit A1
著者Kim, E.E, Shin, S.C.
登録日2018-04-19
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.007 Å)
主引用文献Structural and Molecular Basis for Katanin-Mediated Severing of Glutamylated Microtubules.
Cell Rep, 26, 2019
1OCV
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BU of 1ocv by Molmil
the F116W mutant structure of ketosteroid isomerase from Comamonas testosteroni
分子名称: STEROID DELTA-ISOMERASE
著者Yun, Y.S, Lee, T.-H, Shin, S.
登録日2003-02-11
公開日2003-07-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Origin of the Different Ph Activity Profile in Two Homologous Ketosteroid Isomerases
J.Biol.Chem., 278, 2003
5Z8T
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BU of 5z8t by Molmil
Flavin-containing monooxygenase
分子名称: Acyl-CoA dehydrogenase type 2 domain protein, FLAVIN-ADENINE DINUCLEOTIDE
著者Choe, J, Moon, H, Shin, S.
登録日2018-02-01
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structure of putative Flavin-dependent monooxgenase
To Be Published
5X6S
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BU of 5x6s by Molmil
Acetyl xylan esterase from Aspergillus awamori
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylxylan esterase A, ...
著者Komiya, D, Koseki, T, Fushinobu, S.
登録日2017-02-23
公開日2017-08-23
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure and Substrate Specificity Modification of Acetyl Xylan Esterase from Aspergillus luchuensis
Appl. Environ. Microbiol., 83, 2017
5XB7
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BU of 5xb7 by Molmil
GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04
分子名称: Beta-galactosidase, GLYCEROL, SULFATE ION
著者Viborg, A.H, Katayama, T, Arakawa, T, Abou Hachem, M, Lo Leggio, L, Kitaoka, M, Svensson, B, Fushinobu, S.
登録日2017-03-16
公開日2017-11-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of alpha-l-arabinopyranosidases from human gut microbiome expands the diversity within glycoside hydrolase family 42.
J. Biol. Chem., 292, 2017
3CBF
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BU of 3cbf by Molmil
Crystal structure of LysN, alpha-aminoadipate aminotransferase, from Thermus thermophilus HB27
分子名称: (2S)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]hexanedioic acid, Alpha-aminodipate aminotransferase
著者Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
登録日2008-02-21
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Mechanism for multiple-substrates recognition of alpha-aminoadipate aminotransferase from Thermus thermophilus
Proteins, 2008
8HHV
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BU of 8hhv by Molmil
endo-alpha-D-arabinanase EndoMA1 from Microbacterium arabinogalactanolyticum
分子名称: CALCIUM ION, GLYCEROL, SODIUM ION, ...
著者Nakashima, C, Li, J, Arakawa, T, Yamada, C, Ishiwata, A, Fujita, K, Fushinobu, S.
登録日2022-11-17
公開日2023-08-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Identification and characterization of endo-alpha-, exo-alpha-, and exo-beta-D-arabinofuranosidases degrading lipoarabinomannan and arabinogalactan of mycobacteria.
Nat Commun, 14, 2023
8HR3
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BU of 8hr3 by Molmil
[D-Cys5,Asp7,Val8,D-Lys16]-STp(5-17)
分子名称: DCY-CYS-ASP-VAL-CYS-CYS-ASN-PRO-ALA-CYS-ALA-DLY-CYS
著者Shimamoto, S, Hidaka, Y, Yoshino, S, Goto, M.
登録日2022-12-14
公開日2023-09-20
実験手法SOLUTION NMR
主引用文献The Molecular Basis of Heat-Stable Enterotoxin for Vaccine Development and Cancer Cell Detection.
Molecules, 28, 2023
5B1N
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BU of 5b1n by Molmil
DHp domain structure of EnvZ from Escherichia coli
分子名称: Osmolarity sensor protein EnvZ
著者Okajima, T, Eguchi, Y, Tochio, N, Inukai, Y, Shimizu, R, Ueda, S, Shinya, S, Kigawa, T, Fukamizo, T, Igarashi, M, Utsumi, R.
登録日2015-12-09
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Angucycline antibiotic waldiomycin recognizes common structural motif conserved in bacterial histidine kinases
J. Antibiot., 70, 2017
5AX7
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BU of 5ax7 by Molmil
yeast pyruvyltransferase Pvg1p
分子名称: Pyruvyl transferase 1, ZINC ION
著者Kanekiyo, M, Yoritsune, K, Yoshinaga, S, Higuchi, Y, Takegawa, K, Kakuta, Y.
登録日2015-07-16
公開日2016-06-08
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献A rationally engineered yeast pyruvyltransferase Pvg1p introduces sialylation-like properties in neo-human-type complex oligosaccharide
Sci Rep, 6, 2016
5B0R
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BU of 5b0r by Molmil
Beta-1,2-Mannobiose phosphorylase from Listeria innocua - beta-1,2-mannobiose complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Lin0857 protein, ...
著者Tsuda, T, Arakawa, T, Fushinobu, S.
登録日2015-11-02
公開日2015-12-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Characterization and crystal structure determination of beta-1,2-mannobiose phosphorylase from Listeria innocua
Febs Lett., 589, 2015
5B46
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2-Oxoacid:Ferredoxin Oxidoreductase 2 from Sulfolobus tokodai - ligand free form
分子名称: 2-oxoacid--ferredoxin oxidoreductase alpha subunit, 2-oxoacid--ferredoxin oxidoreductase beta subunit, IRON/SULFUR CLUSTER, ...
著者Yan, Z, Maruyama, A, Arakawa, T, Fushinobu, S, Wakagi, T.
登録日2016-04-01
公開日2016-09-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii
Sci Rep, 6, 2016
5B47
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BU of 5b47 by Molmil
2-Oxoacid:Ferredoxin Oxidoreductase 2 from Sulfolobus tokodai - pyruvate complex
分子名称: 2-oxoacid--ferredoxin oxidoreductase alpha subunit, 2-oxoacid--ferredoxin oxidoreductase beta subunit, IRON/SULFUR CLUSTER, ...
著者Yan, Z, Maruyama, A, Arakawa, T, Fushinobu, S, Wakagi, T.
登録日2016-04-01
公開日2016-09-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii
Sci Rep, 6, 2016
5B0Q
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BU of 5b0q by Molmil
beta-1,2-Mannobiose phosphorylase from Listeria innocua - mannose complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lin0857 protein, SULFATE ION, ...
著者Tsuda, T, Arakawa, T, Fushinobu, S.
登録日2015-11-02
公開日2015-12-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization and crystal structure determination of beta-1,2-mannobiose phosphorylase from Listeria innocua
Febs Lett., 589, 2015
5B48
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BU of 5b48 by Molmil
2-Oxoacid:Ferredoxin Oxidoreductase 1 from Sulfolobus tokodai
分子名称: 2-[(2E)-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-(1-oxidanylpropylidene)-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, 2-oxoacid--ferredoxin oxidoreductase alpha subunit, 2-oxoacid--ferredoxin oxidoreductase beta subunit, ...
著者Yan, Z, Maruyama, A, Arakawa, T, Fushinobu, S, Wakagi, T.
登録日2016-04-01
公開日2016-09-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii
Sci Rep, 6, 2016
5BXT
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BU of 5bxt by Molmil
LNBase in complex with LNB-NHAcAUS
分子名称: Lacto-N-biosidase, N-{[(1R,2R,3R,7S,7aR)-1,2,7-trihydroxyhexahydro-1H-pyrrolizin-3-yl]methyl}acetamide, SULFATE ION, ...
著者Ito, T, Arakawa, T, Fushinobu, S.
登録日2015-06-09
公開日2015-09-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Gaining insight into the catalysis by GH20 lacto-N-biosidase using small molecule inhibitors and structural analysis
Chem.Commun.(Camb.), 51, 2015
8HEW
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BU of 8hew by Molmil
Potato 14-3-3 St14f
分子名称: 14-3-3 protein, StFDL1 peptide
著者Taoka, K, Kawahara, I, Shinya, S, Harada, K, Muranaka, T, Furuita, K, Nakagawa, A, Fujiwara, T, Tsuji, H, Kojima, C.
登録日2022-11-08
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Multifunctional chemical inhibitors of the florigen activation complex discovered by structure-based high-throughput screening.
Plant J., 112, 2022
2KFJ
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BU of 2kfj by Molmil
Solution structure of the loop deletion mutant of PB1 domain of Cdc24p
分子名称: Cell division control protein 24
著者Ogura, K, Tandai, T, Yoshinaga, S, Kobashigawa, Y, Kumeta, H, Inagaki, F.
登録日2009-02-22
公開日2009-10-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
2KFK
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BU of 2kfk by Molmil
Solution structure of Bem1p PB1 domain complexed with Cdc24p PB1 domain
分子名称: Bud emergence protein 1, Cell division control protein 24
著者Kobashigawa, Y, Yoshinaga, S, Tandai, T, Ogura, K, Inagaki, F.
登録日2009-02-23
公開日2009-10-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
4WH2
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BU of 4wh2 by Molmil
N-acetylhexosamine 1-kinase in complex with ADP
分子名称: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
著者Sato, M, Arakawa, T, Nam, Y.W, Nishimoto, M, Kitaoka, M, Fushinobu, S.
登録日2014-09-19
公開日2015-02-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.847 Å)
主引用文献Open-close structural change upon ligand binding and two magnesium ions required for the catalysis of N-acetylhexosamine 1-kinase
Biochim.Biophys.Acta, 1854, 2015
4WH1
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BU of 4wh1 by Molmil
N-Acetylhexosamine 1-kinase (ligand free)
分子名称: ACETIC ACID, GLYCEROL, N-acetylhexosamine 1-kinase
著者Sato, M, Arakawa, T, Nam, Y.W, Nishimoto, M, Kitaoka, M, Fushinobu, S.
登録日2014-09-19
公開日2015-02-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Open-close structural change upon ligand binding and two magnesium ions required for the catalysis of N-acetylhexosamine 1-kinase
Biochim.Biophys.Acta, 1854, 2015
4WH3
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N-acetylhexosamine 1-kinase in complex with ATP
分子名称: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Sato, M, Arakawa, T, Nam, Y.W, Nishimoto, M, Kitaoka, M, Fushinobu, S.
登録日2014-09-19
公開日2015-02-18
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Open-close structural change upon ligand binding and two magnesium ions required for the catalysis of N-acetylhexosamine 1-kinase
Biochim.Biophys.Acta, 1854, 2015
5GKI
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BU of 5gki by Molmil
Structure of EndoMS-dsDNA3 complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*GP*CP*CP*TP*AP*GP*GP*TP*CP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*GP*GP*GP*CP*CP*TP*AP*GP*GP*C)-3'), ...
著者Nakae, S, Hijikata, A, Tsuji, T, Yonezawa, K, Kouyama, K, Mayanagi, K, Ishino, S, Ishino, Y, Shirai, T.
登録日2016-07-04
公開日2016-11-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016
5GKJ
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Structure of EndoMS in apo form
分子名称: Endonuclease EndoMS
著者Nakae, S, Hijikata, A, Tsuji, T, Yonezawa, K, Kouyama, K, Mayanagi, K, Ishino, S, Ishino, Y, Shirai, T.
登録日2016-07-04
公開日2016-11-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016

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件を2024-08-07に公開中

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