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PDB: 52 results
2RQZ
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BU of 2rqz by Molmil
Structure of sugar modified epidermal growth factor-like repeat 12 of mouse Notch-1 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-alpha-L-fucopyranose, Neurogenic locus notch homolog protein 1
Authors:Shimizu, K, Fujitani, N, Hosoguchi, K, Nishimura, S.
Deposit date:2010-02-26
Release date:2010-10-13
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Chemical Synthesis, Folding, and Structural Insights into O-Fucosylated Epidermal Growth Factor-like Repeat 12 of Mouse Notch-1 Receptor
J.Am.Chem.Soc., 132, 2010
6L6K
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BU of 6l6k by Molmil
Crystal structure of dimeric RXRalpha-LBD complexed with partial agonist CBt-PMN and SRC1
Descriptor: 1-(3,5,5,8,8-pentamethyl-6,7-dihydronaphthalen-2-yl)benzotriazole-5-carboxylic acid, CALCIUM ION, Nuclear receptor coactivator 1, ...
Authors:Shimizu, K, Numoto, N, Nakano, S, Makishima, M, Kakuta, H, Ito, N.
Deposit date:2019-10-29
Release date:2020-11-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of dimeric RXRalpha-LBD complexed with partial agonist CBt-PMN and SRC1
To Be Published
1X1O
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BU of 1x1o by Molmil
Crystal structure of project ID TT0268 from Thermus thermophilus HB8
Descriptor: nicotinate-nucleotide pyrophosphorylase
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-04-08
Release date:2006-04-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of project ID TT0268 from Thermus thermophilus HB8
To be Published
1WN2
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BU of 1wn2 by Molmil
Crystal structure of project ID PH1539 from Pyrococcus horikoshii OT3
Descriptor: Peptidyl-tRNA hydrolase, SODIUM ION
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-26
Release date:2005-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of peptidyl-tRNA hydrolase 2 from Pyrococcus horikoshii OT3: insight into the functional role of its dimeric state.
Acta Crystallogr.,Sect.D, 64, 2008
1WS9
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BU of 1ws9 by Molmil
Crystal structure of project ID TT0172 from Thermus thermophilus HB8
Descriptor: acyl-CoA dehydrogenase
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-11-02
Release date:2005-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of project ID TT0172 from Thermus thermophilus HB8
To be Published
1WU8
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BU of 1wu8 by Molmil
Crystal structure of project PH0463 from Pyrococcus horikoshii OT3
Descriptor: ADENOSINE, hypothetical protein PH0463
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-12-02
Release date:2005-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of project ID PH0463 from Pyrococcus horikoshii OT3
To be Published
1V8G
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BU of 1v8g by Molmil
Crystal structure of anthranilate phosphoribosyltransferase (TrpD) from Thermus thermophilus HB8
Descriptor: anthranilate phosphoribosyltransferase
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-08
Release date:2004-01-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of anthranilate phosphoribosyltransferase (TrpD) from Thermus thermophilus HB8
To be Published
2D29
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BU of 2d29 by Molmil
Structural study on project ID TT0172 from Thermus thermophilus HB8
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, acyl-CoA dehydrogenase
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-09-05
Release date:2006-03-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural study on project ID TT0172 from Thermus thermophilus HB8
To be Published
2D3K
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BU of 2d3k by Molmil
Structural study on Project ID PH1539 from Pyrococcus horikoshii OT3
Descriptor: Peptidyl-tRNA hydrolase, ZINC ION
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-09-29
Release date:2006-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of peptidyl-tRNA hydrolase 2 from Pyrococcus horikoshii OT3: insight into the functional role of its dimeric state.
Acta Crystallogr.,Sect.D, 64, 2008
2DEK
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BU of 2dek by Molmil
Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3 at 1.65 A resolution
Descriptor: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-10
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3 at 1.65 A resolution
To be Published
2DSL
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BU of 2dsl by Molmil
Mutant N33D structure of phenylacetic acid degradation protein PaaI from Thermus thermophilus HB8
Descriptor: CHLORIDE ION, MAGNESIUM ION, Phenylacetic acid degradation protein PaaI
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-06-30
Release date:2006-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mutant N33D structure of phenylacetic acid degradation protein PaaI from Thermus thermophilus HB8
To be Published
2DSJ
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BU of 2dsj by Molmil
Crystal structure of project ID TT0128 from Thermus thermophilus HB8
Descriptor: CHLORIDE ION, Pyrimidine-nucleoside (Thymidine) phosphorylase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-06-30
Release date:2006-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of project ID TT0128 from Thermus thermophilus HB8
To be Published
2E9Y
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BU of 2e9y by Molmil
Crystal structure of project APE1968 from Aeropyrum pernix K1
Descriptor: Carbamate kinase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-29
Release date:2007-07-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of project APE1968 from Aeropyrum pernix K1
To be Published
2ENI
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BU of 2eni by Molmil
Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2ENW
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BU of 2enw by Molmil
Mutant Y92H structure of TTHB049 from Thermus thermophilus HB8
Descriptor: Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mutant Y92H structure of TTHB049 from Thermus thermophilus HB8
To be Published
2EJJ
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BU of 2ejj by Molmil
Mutant K129M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mutant K129M structure of PH0725 from Pyrococcus horikoshii OT3
to be published
2E4R
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BU of 2e4r by Molmil
Mutant I253M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-15
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutant I253M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2EJK
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BU of 2ejk by Molmil
Mutant L38M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mutant L38M structure of PH0725 from Pyrococcus horikoshii OT3
to be published
2ELD
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BU of 2eld by Molmil
Mutant L160M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-27
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutant L160M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2ED3
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BU of 2ed3 by Molmil
Mutant I127M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-14
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mutant I127M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2EEQ
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BU of 2eeq by Molmil
Mutant Y29M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-16
Release date:2007-08-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mutant Y29M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2ELC
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BU of 2elc by Molmil
Crystal structure of TTHA1842 from Thermus thermophilus HB8
Descriptor: Anthranilate phosphoribosyltransferase, GLYCEROL, SODIUM ION
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-27
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of TTHA1842 from Thermus thermophilus HB8
To be Published
2EMU
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BU of 2emu by Molmil
Mutant L21H structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutant L21H structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2ENU
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BU of 2enu by Molmil
Mutant L121M structure of TTHB049 from Thermus thermophilus HB8
Descriptor: Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mutant L121M structure of TTHB049 from Thermus thermophilus HB8
To be Published
2EMR
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BU of 2emr by Molmil
Mutant L65M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
Authors:Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mutant L65M structure of PH0725 from Pyrococcus horikoshii OT3
To be Published

 

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