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PDB: 143 件

5X8R
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BU of 5x8r by Molmil
Structure of the 30S small subunit of chloroplast ribosome from spinach
分子名称: 16S rRNA, 30S ribosomal protein S1, chloroplastic, ...
著者Ahmed, T, Shi, J, Bhushan, S.
登録日2017-03-03
公開日2017-06-07
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation
Nucleic Acids Res., 45, 2017
5X8P
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BU of 5x8p by Molmil
Structure of the 70S chloroplast ribosome from spinach
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Ahmed, T, Shi, J, Bhushan, S.
登録日2017-03-03
公開日2017-06-14
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation
Nucleic Acids Res., 45, 2017
3JYI
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BU of 3jyi by Molmil
Structural and biochemical evidence that a TEM-1 {beta}-lactamase Asn170Gly active site mutant acts via substrate-assisted catalysis
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase TEM, PHOSPHATE ION
著者Brown, N.G, Palzkill, T.G, Prasad, B.V.V, Shanker, S.
登録日2009-09-21
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structural and biochemical evidence that a TEM-1 beta-lactamase N170G active site mutant acts via substrate-assisted catalysis
J.Biol.Chem., 284, 2009
5X8T
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BU of 5x8t by Molmil
Structure of the 50S large subunit of chloroplast ribosome from spinach
分子名称: 23S rRNA, 4.8S rRNA, 50S ribosomal protein L13, ...
著者Ahmed, T, Shi, J, Bhushan, S.
登録日2017-03-03
公開日2017-06-07
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation
Nucleic Acids Res., 45, 2017
5IMR
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BU of 5imr by Molmil
Structure of ribosome bound to cofactor at 5.7 angstrom resolution
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Kumar, V, Ero, R, Jian, G.K, Ahmed, T, Zhan, Y, Bhushan, S, Gao, Y.G.
登録日2016-03-06
公開日2016-05-18
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
J.Biol.Chem., 291, 2016
5IMQ
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BU of 5imq by Molmil
Structure of ribosome bound to cofactor at 3.8 angstrom resolution
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Kumar, V, Ero, R, Jian, G.K, Ahmed, T, Zhan, Y, Bhushan, S, Gao, Y.G.
登録日2016-03-06
公開日2016-05-18
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
J.Biol.Chem., 291, 2016
6QGM
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BU of 6qgm by Molmil
VirX1 apo structure
分子名称: VirX1
著者Gkotsi, D.S, Ludewig, H, Sharma, S.V, Unsworth, W.P, Taylor, R.J.K, McLachlan, M.M.W, Shanahan, S, Naismith, J.H, Goss, R.J.M.
登録日2019-01-11
公開日2019-10-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A marine viral halogenase that iodinates diverse substrates.
Nat.Chem., 11, 2019
7YK5
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BU of 7yk5 by Molmil
Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Multifunctional fusion protein, PYCO1 LSU binding motif, ...
著者Oh, Z.G, Ang, W.S.L, Bhushan, S, Mueller-Cajar, O.
登録日2022-07-21
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献A linker protein from a red-type pyrenoid phase separates with Rubisco via oligomerizing sticker motifs.
Proc.Natl.Acad.Sci.USA, 120, 2023
6EJW
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BU of 6ejw by Molmil
Tryptophan Repressor TrpR from E.coli wildtype with Indole-3-acetic acid as ligand
分子名称: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-09-23
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6ELB
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BU of 6elb by Molmil
Tryptophan Repressor TrpR from E.coli variant M42F T44L T81M N87G S88Y with Indole-3-acetic acid as ligand
分子名称: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-09-28
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.437 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6ENI
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BU of 6eni by Molmil
Tryptophan Repressor TrpR from E.coli variant T44L S88Y with Indole-3-acetic acid as ligand
分子名称: 1,2-ETHANEDIOL, 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-10-04
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6ELG
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BU of 6elg by Molmil
Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetonitrile
分子名称: 1H-indol-3-ylacetonitrile, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-09-28
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6EJZ
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BU of 6ejz by Molmil
Tryptophan Repressor TrpR from E.coli variant S88Y with Indole-3-acetic acid as ligand
分子名称: 1,2-ETHANEDIOL, 1H-INDOL-3-YLACETIC ACID, SULFATE ION, ...
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-09-24
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6ELF
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BU of 6elf by Molmil
Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetic acid as ligand
分子名称: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-09-28
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.832 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6EKP
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BU of 6ekp by Molmil
Tryptophan Repressor TrpR from E.coli variant T44L T81M S88Y with Indole-3-acetic acid as ligand
分子名称: 1H-INDOL-3-YLACETIC ACID, 3,6,9,12,15-PENTAOXAHEPTADECANE, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-09-26
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6ENN
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BU of 6enn by Molmil
Tryptophan Repressor TrpR from E.coli variant T44L T81M N87G S88Y with Indole-3-acetic acid as ligand
分子名称: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B.
登録日2017-10-05
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献A biosensor for the direct visualization of auxin
Nature, 2021
6FAL
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BU of 6fal by Molmil
Tryptophan Repressor TrpR from E.coli with 3-Indolepropionic acid as ligand
分子名称: INDOLYLPROPIONIC ACID, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Hocker, B.
登録日2017-12-15
公開日2019-01-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Tryptophan Repressor TrpR from E.coli: A ligand binding study
To Be Published
6F7F
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BU of 6f7f by Molmil
Tryptophan Repressor TrpR from E.coli with 3-Indolepropionic acid
分子名称: INDOLYLPROPIONIC ACID, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Hocker, B.
登録日2017-12-08
公開日2019-03-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.128 Å)
主引用文献Tryptophan Repressor TrpR: A study of ligand binding specificity
To Be Published
6F7G
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BU of 6f7g by Molmil
Tryptophan Repressor TrpR from E.coli with 5-Methyltryptamine
分子名称: 2-(5-methyl-1~{H}-indol-3-yl)ethanamine, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Hocker, B.
登録日2017-12-08
公開日2018-12-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.656 Å)
主引用文献Tryptophan Repressor TrpR: A ligand specificity study
To Be Published
6F9K
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BU of 6f9k by Molmil
Tryptophan Repressor TrpR from E.coli with 5-methyl-L-tryptophan as ligand
分子名称: 5-methyl-L-tryptophan, SULFATE ION, Trp operon repressor
著者Stiel, A.C, Shanmugaratnam, S, Hocker, B.
登録日2017-12-14
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Tryptophan Repressor TrpR from E.coli: A ligand binding study
To Be Published
6SLD
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BU of 6sld by Molmil
Structure of the Phosphatidylcholine Binding Mutant of Yeast Sec14 Homolog Sfh1 (S175I,T177I) in Complex with Phosphatidylinositol
分子名称: (1R)-2-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CRAL-TRIO domain-containing protein YKL091C
著者Berger, J, Fitz, M, Johnen, P, Shanmugaratnam, S, Hocker, B, Stiel, A.C, Schaaf, G.
登録日2019-08-19
公開日2020-08-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of the Phosphatidylcholine Binding Mutant of Yeast Sec14 Homolog Sfh1 (S175I,T177I) in Complex with Phosphatidylinositol
To Be Published
5FSW
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BU of 5fsw by Molmil
RNA dependent RNA polymerase QDE-1 from Thielavia terrestris
分子名称: RNA DEPENDENT RNA POLYMERASE QDE-1
著者Qian, X, Hamid, F.M, El Sahili, A, Darwis, D.A, Wong, Y.H, Bhushan, S, Makeyev, E.V, Lescar, J.
登録日2016-01-08
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Functional Evolution in Orthologous Cell-Encoded RNA-Dependent RNA Polymerases
J.Biol.Chem., 291, 2016
4INH
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BU of 4inh by Molmil
Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
分子名称: DIMETHYL SULFOXIDE, Genome polyprotein, peptide inhibitor, ...
著者Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
登録日2013-01-04
公開日2013-02-20
最終更新日2013-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013
8R8O
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BU of 8r8o by Molmil
Hallucinated de novo TIM barrel with three helical extensions - HalluTIM3-1
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Beck, J, Shanmugaratnam, S, Hocker, B.
登録日2023-11-29
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Diversifying de novo TIM barrels by hallucination.
Protein Sci., 33, 2024
8R8N
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BU of 8r8n by Molmil
Hallucinated de novo TIM barrel with two helical extensions - HalluTIM2-2
分子名称: HalluTIM2-2, SULFATE ION
著者Beck, J, Shanmugaratnam, S, Hocker, B.
登録日2023-11-29
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Diversifying de novo TIM barrels by hallucination.
Protein Sci., 33, 2024

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