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PDB: 15 results

8FWK
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BU of 8fwk by Molmil
CryoEM structure of Human ABCB6 Transporter
Descriptor: ATP-binding cassette sub-family B member 6
Authors:Shaik, M.M, Myasnikov, A.
Deposit date:2023-01-22
Release date:2023-02-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:CryoEM structure of Human ABCB6 Transporter
To Be Published
6MEO
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BU of 6meo by Molmil
Structural basis of coreceptor recognition by HIV-1 envelope spike
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shaik, M.M, Chen, B.
Deposit date:2018-09-06
Release date:2018-12-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of coreceptor recognition by HIV-1 envelope spike.
Nature, 565, 2018
6MET
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BU of 6met by Molmil
Structural basis of coreceptor recognition by HIV-1 envelope spike
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shaik, M.M, Chen, B.
Deposit date:2018-09-07
Release date:2018-12-12
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural basis of coreceptor recognition by HIV-1 envelope spike.
Nature, 565, 2018
4S3L
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BU of 4s3l by Molmil
Crystal Structure of major pilin protein PitB from type II pilus of Streptococcus pneumoniae
Descriptor: Major Pilin Protein
Authors:Shaik, M.M, Dessen, A, Di Guilmi, A.M.
Deposit date:2015-02-10
Release date:2015-07-29
Last modified:2015-10-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Structural Snapshot of Type II Pilus Formation in Streptococcus pneumoniae.
J.Biol.Chem., 290, 2015
4Y4Q
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BU of 4y4q by Molmil
Crystal structure of sortase B from Type II pilus of Streptococcus pneumoniae
Descriptor: Sortase, SrtB family
Authors:Shaik, M.M, Dessen, A, Di Guilmi, A.M.
Deposit date:2015-02-10
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.162 Å)
Cite:A Structural Snapshot of Type II Pilus Formation in Streptococcus pneumoniae.
J.Biol.Chem., 290, 2015
5TSN
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BU of 5tsn by Molmil
Crystal structures of Norwalk virus polymerase bound to an RNA primer-template duplex
Descriptor: MANGANESE (II) ION, Norwalk virus polymerase, RNA (5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3')
Authors:Shaik, M.M, Ng, K.K.
Deposit date:2016-10-30
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Norovirus RNA-dependent RNA polymerase: A computational study of metal-binding preferences.
Proteins, 85, 2017
4LY4
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BU of 4ly4 by Molmil
Crystal structure of peptidoglycan deacetylase (HP0310) with Zinc from Helicobacter pylori
Descriptor: ZINC ION, peptidoglycan deacetylase
Authors:Shaik, M.M, Zanotti, G.
Deposit date:2013-07-30
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Characterization of the divalent metal binding site of bacterial polysaccharide deacetylase using crystallography and quantum chemical calculations.
Proteins, 82, 2014
4INO
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BU of 4ino by Molmil
The crystal structure of Helicobacter pylori Ceue (HP1561)
Descriptor: Nickel (II) ABC transporter, periplasmic nickel-binding protein
Authors:Shaik, M.M, Cendron, L, Zanotti, G.
Deposit date:2013-01-05
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Helicobacter pylori periplasmic receptor CeuE (HP1561) modulates its nickel affinity via organic metallophores.
Mol.Microbiol., 91, 2014
4INP
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BU of 4inp by Molmil
The crystal structure of Helicobacter pylori Ceue (HP1561) with Ni(II) bound
Descriptor: ACETATE ION, Iron (III) ABC transporter, periplasmic iron-binding protein, ...
Authors:Shaik, M.M, Cendron, L, Zanotti, G.
Deposit date:2013-01-05
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Helicobacter pylori periplasmic receptor CeuE (HP1561) modulates its nickel affinity via organic metallophores.
Mol.Microbiol., 91, 2014
3SXP
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BU of 3sxp by Molmil
Crystal Structure of Helicobacter pylori ADP-L-glycero-D-manno-heptose-6-epimerase (rfaD, HP0859)
Descriptor: ADP-L-glycero-D-mannoheptose-6-epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Shaik, M.M, Zanotti, G, Cendron, L.
Deposit date:2011-07-15
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The crystal structure of ADP-L-glycero-D-manno-heptose-6-epimerase (HP0859) from Helicobacter pylori.
Biochim.Biophys.Acta, 1814, 2011
3QBU
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BU of 3qbu by Molmil
Crystal structure of putative peptidoglycan deactelyase (HP0310) from Helicobacter pylori
Descriptor: Putative uncharacterized protein, ZINC ION
Authors:Shaik, M.M, Cendron, L, Percudani, R, Zanotti, G.
Deposit date:2011-01-14
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5701 Å)
Cite:The Structure of Helicobacter pylori HP0310 Reveals an Atypical Peptidoglycan Deacetylase.
Plos One, 6, 2011
6E8W
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BU of 6e8w by Molmil
MPER-TM Domain of HIV-1 envelope glycoprotein (Env)
Descriptor: Envelope glycoprotein gp160
Authors:Fu, Q, Shaik, M.M, Cai, Y, Ghantous, F, Piai, A, Peng, H, Rits-Volloch, S, Liu, Z, Harrison, S.C, Seaman, M.S, Chen, B, Chou, J.J.
Deposit date:2018-07-31
Release date:2018-09-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the membrane proximal external region of HIV-1 envelope glycoprotein.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6UJV
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BU of 6ujv by Molmil
Model of the HIV-1 gp41 membrane-proximal external region, transmembrane domain and cytoplasmic tail (LLP2)
Descriptor: Envelope glycoprotein GP41
Authors:Piai, A, Fu, Q, Cai, Y, Ghantous, F, Xiao, T, Shaik, M.M, Peng, H, Rits-Volloch, S, Liu, Z, Chen, W, Seaman, M.S, Chen, B, Chou, J.J.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of transmembrane coupling of the HIV-1 envelope glycoprotein.
Nat Commun, 11, 2020
6UJU
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BU of 6uju by Molmil
Structure of the HIV-1 gp41 transmembrane domain and cytoplasmic tail (LLP2)
Descriptor: Envelope glycoprotein GP41
Authors:Piai, A, Fu, Q, Cai, Y, Ghantous, F, Xiao, T, Shaik, M.M, Peng, H, Rits-Volloch, S, Liu, Z, Chen, W, Seaman, M.S, Chen, B, Chou, J.J.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of transmembrane coupling of the HIV-1 envelope glycoprotein.
Nat Commun, 11, 2020
4LS3
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BU of 4ls3 by Molmil
THE crystal STRUCTURE OF HELICOBACTER PYLORI CEUE(HP1561)/NI-HIS COMPL
Descriptor: HISTIDINE, NICKEL (II) ION, Nickel (III) ABC transporter, ...
Authors:Salamina, M, Shaik, M.M, Cendron, L, Zanotti, G.
Deposit date:2013-07-22
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Helicobacter pylori periplasmic receptor CeuE (HP1561) modulates its nickel affinity via organic metallophores.
Mol.Microbiol., 91, 2014

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