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PDB: 237 件
7X7T
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BU of 7x7t by Molmil
Cryo-EM structure of SARS-CoV-2 spike protein in complex with three nAbs X01, X10 and X17
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, X01 heavy chain, ...
著者Sun, H, Liu, L, Zheng, Q, Li, S, Zhang, T, Xia, N.
登録日2022-03-10
公開日2022-08-17
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献The neutralizing breadth of antibodies targeting diverse conserved epitopes between SARS-CoV and SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7X7V
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BU of 7x7v by Molmil
Cryo-EM structure of SARS-CoV spike protein in complex with three nAbs X01, X10 and X17
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, X01 heavy chain, ...
著者Sun, H, Liu, L, Zhang, T, Zheng, Q, Li, S, Xia, N.
登録日2022-03-10
公開日2022-08-17
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (3.83 Å)
主引用文献The neutralizing breadth of antibodies targeting diverse conserved epitopes between SARS-CoV and SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7CUJ
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BU of 7cuj by Molmil
Crystal structure of fission yeast Ccq1 and Tpz1
分子名称: Coiled-coil quantitatively-enriched protein 1, Protection of telomeres protein tpz1
著者Sun, H, Wu, Z, Wu, J, Lei, M.
登録日2020-08-23
公開日2021-08-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into Pot1-ssDNA, Pot1-Tpz1 and Tpz1-Ccq1 Interactions within fission yeast shelterin complex.
Plos Genet., 18, 2022
7XHH
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BU of 7xhh by Molmil
High-resolution X-ray cocrystal structure of USP7 in complex with X4
分子名称: 3-[4-(aminomethyl)phenyl]-6-[[1-[[2-chloranyl-4-(1,2,4-oxadiazol-3-yl)phenyl]methyl]-4-oxidanyl-piperidin-4-yl]methyl]-2-methyl-pyrazolo[4,3-d]pyrimidin-7-one, Ubiquitin carboxyl-terminal hydrolase 7
著者Sun, H.B, Wen, X.A.
登録日2022-04-08
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献High-resolution X-ray cocrystal structure of USP7 in complex with X4
To Be Published
7CUI
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BU of 7cui by Molmil
Crystal structure of fission yeast Pot1 and Tpz1
分子名称: Protection of telomeres protein 1, Protection of telomeres protein tpz1, SULFATE ION
著者Sun, H, Wu, Z, Wu, J, Lei, M.
登録日2020-08-23
公開日2021-08-25
最終更新日2022-09-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into Pot1-ssDNA, Pot1-Tpz1 and Tpz1-Ccq1 Interactions within fission yeast shelterin complex.
Plos Genet., 18, 2022
7CUH
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BU of 7cuh by Molmil
Crystal structure of fission yeast Pot1 and ssDNA
分子名称: Protection of telomeres protein 1, Telomere single-strand DNA
著者Sun, H, Wu, Z, Wu, J, Lei, M.
登録日2020-08-23
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into Pot1-ssDNA, Pot1-Tpz1 and Tpz1-Ccq1 Interactions within fission yeast shelterin complex.
Plos Genet., 18, 2022
7XHK
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BU of 7xhk by Molmil
High-resolution X-ray cocrystal structure of USP7 in complex with LX04-46
分子名称: Ubiquitin carboxyl-terminal hydrolase 7, ~{N}-[[4-[6-[[1-[[2-chloranyl-4-(furan-2-yl)phenyl]methyl]-4-oxidanyl-piperidin-4-yl]methyl]-2-methyl-7-oxidanylidene-pyrazolo[4,3-d]pyrimidin-3-yl]phenyl]methyl]methanamide
著者Sun, H.B, Wen, X.A.
登録日2022-04-08
公開日2023-06-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献High-resolution X-ray cocrystal structure of USP7 in complex with LX04-46
To Be Published
7D6C
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BU of 7d6c by Molmil
Crystal structure of CcmM N-terminal domain in complex with CcmN
分子名称: Carbon dioxide concentrating mechanism protein CcmM, Carboxysome assembly protein CcmN
著者Sun, H, Cui, N, Han, S.J, Chen, Z.P, Xia, L.Y, Chen, Y, Jiang, Y.L, Zhou, C.Z.
登録日2020-09-30
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Complex structure reveals CcmM and CcmN form a heterotrimeric adaptor in beta-carboxysome.
Protein Sci., 30, 2021
1UI7
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BU of 1ui7 by Molmil
Site-directed mutagenesis of His433 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
登録日2003-07-15
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
1UI8
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BU of 1ui8 by Molmil
Site-directed mutagenesis of His592 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
登録日2003-07-15
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
2EJY
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BU of 2ejy by Molmil
Solution structure of the p55 PDZ T85C domain complexed with the glycophorin C F127C peptide
分子名称: 55 kDa erythrocyte membrane protein, Glycophorin C
著者Kusunoki, H, Kohno, T.
登録日2007-03-22
公開日2008-02-12
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Structural insight into the interaction between the p55 PDZ domain and glycophorin C
Biochem.Biophys.Res.Commun., 359, 2007
5JXL
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BU of 5jxl by Molmil
Cryo-EM structure of the flagellar hook of Campylobacter jejuni
分子名称: flagellar hook protein FlgE
著者Matsunami, H, Wolf, M, Samatey, F.A.
登録日2016-05-13
公開日2016-11-16
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Complete structure of the bacterial flagellar hook reveals extensive set of stabilizing interactions
Nat Commun, 7, 2016
1A13
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BU of 1a13 by Molmil
G PROTEIN-BOUND CONFORMATION OF MASTOPARAN-X, NMR, 14 STRUCTURES
分子名称: MASTOPARAN-X
著者Kusunoki, H, Wakamatsu, K, Sato, K, Miyazawa, T, Kohno, T.
登録日1997-12-20
公開日1999-01-13
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献G protein-bound conformation of mastoparan-X: heteronuclear multidimensional transferred nuclear overhauser effect analysis of peptide uniformly enriched with 13C and 15N.
Biochemistry, 37, 1998
3HJR
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BU of 3hjr by Molmil
Crystal structure of serine protease of Aeromonas sobria
分子名称: CALCIUM ION, Extracellular serine protease
著者Utsunomiya, H, Tsuge, H, Kobayashi, H, Okamoto, K.
登録日2009-05-22
公開日2009-06-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for the kexin-like serine protease from Aeromonas sobria as a sepsis-causing factor
J.Biol.Chem., 284, 2009
1K1V
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BU of 1k1v by Molmil
Solution Structure of the DNA-Binding Domain of MafG
分子名称: MafG
著者Kusunoki, H, Motohashi, H, Katsuoka, F, Morohashi, A, Yamamoto, M, Tanaka, T.
登録日2001-09-25
公開日2002-04-10
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA-binding domain of MafG.
Nat.Struct.Biol., 9, 2002
7C7V
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BU of 7c7v by Molmil
Vitamin D3 receptor/lithochoric acid derivative complex
分子名称: (4R)-4-[(3R,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid, FORMIC ACID, Mediator of RNA polymerase II transcription subunit 1, ...
著者Masuno, H, Numoto, N, Kagechika, H, Ito, N.
登録日2020-05-26
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Lithocholic Acid Derivatives as Potent Vitamin D Receptor Agonists.
J.Med.Chem., 64, 2021
7C7W
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BU of 7c7w by Molmil
Vitamin D3 receptor/lithochoric acid derivative complex
分子名称: (4R)-4-[(3S,5R,8R,9S,10S,13R,14S,17R)-10,13-dimethyl-3-(2-methyl-2-oxidanyl-propyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid, FORMIC ACID, Mediator of RNA polymerase II transcription subunit 1, ...
著者Masuno, H, Numoto, N, Kagechika, H, Ito, N.
登録日2020-05-26
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Lithocholic Acid Derivatives as Potent Vitamin D Receptor Agonists.
J.Med.Chem., 64, 2021
6K5O
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BU of 6k5o by Molmil
Development of Novel Lithocholic Acid Derivatives as Vitamin D Receptor Agonists
分子名称: (4~{R})-4-[(3~{R},5~{R},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3-methylsulfonyloxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoic acid, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
著者Masuno, H, Kagechika, H, Ito, N.
登録日2019-05-29
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Development of novel lithocholic acid derivatives as vitamin D receptor agonists.
Bioorg.Med.Chem., 27, 2019
2UYG
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BU of 2uyg by Molmil
Crystallogaphic structure of the typeII 3-Dehydroquinase from Thermus Thermophilus
分子名称: 3-DEHYDROQUINATE DEHYDRATASE, GLYCEROL
著者Utsunomiya, H, Agari, Y, Imagawa, T, Tsuge, H.
登録日2007-04-05
公開日2008-05-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystallogaphic Structure of the Typeii 3-Dehydroquinase from Thermus Thermophilus
To be Published
1S35
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BU of 1s35 by Molmil
Crystal Structure of Repeats 8 and 9 of Human Erythroid Spectrin
分子名称: SULFATE ION, Spectrin beta chain, erythrocyte
著者Kusunoki, H, MacDonald, R.I, Mondragon, A.
登録日2004-01-12
公開日2004-04-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into the stability and flexibility of unusual erythroid spectrin repeats
Structure, 12, 2004
1U5P
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BU of 1u5p by Molmil
Crystal Structure of Repeats 15 and 16 of Chicken Brain Alpha Spectrin
分子名称: PHOSPHATE ION, POTASSIUM ION, Spectrin alpha chain, ...
著者Kusunoki, H, Minasov, G, MacDonald, R.I, Mondragon, A.
登録日2004-07-28
公開日2004-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain alpha-Spectrin
J.Mol.Biol., 344, 2004
1U4Q
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BU of 1u4q by Molmil
Crystal Structure of Repeats 15, 16 and 17 of Chicken Brain Alpha Spectrin
分子名称: Spectrin alpha chain, brain
著者Kusunoki, H, Minasov, G, MacDonald, R.I, Mondragon, A.
登録日2004-07-26
公開日2004-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain alpha-Spectrin
J.Mol.Biol., 344, 2004
7EHA
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BU of 7eha by Molmil
Crystal structure of the flagellar hook cap from Salmonella enterica serovar Typhimurium
分子名称: Basal-body rod modification protein FlgD
著者Matsunami, H, Yoon, Y.-H, Imada, K, Namba, K, Samatey, F.A.
登録日2021-03-29
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the bacterial flagellar hook cap provides insights into a hook assembly mechanism
Commun Biol, 4, 2021
7EH9
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BU of 7eh9 by Molmil
Crystal structure of the flagellar hook cap fragment from Salmonella enterica serovar Typhimurium
分子名称: Basal-body rod modification protein FlgD
著者Matsunami, H, Yoon, Y.-H, Imada, K, Namba, K, Samatey, F.A.
登録日2021-03-29
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the bacterial flagellar hook cap provides insights into a hook assembly mechanism
Commun Biol, 4, 2021
3TEE
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BU of 3tee by Molmil
Crystal Structure of Salmonella FlgA in open form
分子名称: CHLORIDE ION, Flagella basal body P-ring formation protein flgA, GLYCEROL
著者Matsunami, H, Samatey, F.A, Namba, K.
登録日2011-08-12
公開日2012-08-15
最終更新日2016-07-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural flexibility of the periplasmic protein, FlgA, regulates flagellar P-ring assembly in Salmonella enterica
Sci Rep, 6, 2016

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件を2024-10-02に公開中

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