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PDB: 27 件
3EPT
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BU of 3ept by Molmil
Structure of the rebeccamycin biosynthetic enzyme RebC with reduced flavin
分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, RebC, SODIUM ION
著者Ryan, K.S, Drennan, C.L.
登録日2008-09-30
公開日2008-12-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献The FAD cofactor of RebC shifts to an IN conformation upon flavin reduction
Biochemistry, 47, 2008
3BMZ
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BU of 3bmz by Molmil
Violacein biosynthetic enzyme VioE
分子名称: Putative uncharacterized protein, TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL
著者Ryan, K.S, Drennan, C.L.
登録日2007-12-13
公開日2008-01-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献The Violacein Biosynthetic Enzyme VioE Shares a Fold with Lipoprotein Transporter Proteins
J.Biol.Chem., 283, 2008
2R0G
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BU of 2r0g by Molmil
Chromopyrrolic acid-soaked RebC with bound 7-carboxy-K252c
分子名称: 7-carboxy-5-hydroxy-12,13-dihydro-6H-indolo[2,3-a]pyrrolo[3,4-c]carbazole, FLAVIN-ADENINE DINUCLEOTIDE, RebC
著者Ryan, K.S, Drennan, C.L.
登録日2007-08-19
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Crystallographic trapping in the rebeccamycin biosynthetic enzyme RebC
Proc.Natl.Acad.Sci.Usa, 104, 2007
2R0C
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BU of 2r0c by Molmil
Structure of the substrate-free form of the rebeccamycin biosynthetic enzyme REBC
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, RebC
著者Ryan, K.S, Drennan, C.L.
登録日2007-08-18
公開日2007-09-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic trapping in the rebeccamycin biosynthetic enzyme RebC
Proc.Natl.Acad.Sci.Usa, 104, 2007
2R0P
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BU of 2r0p by Molmil
K252c-soaked RebC
分子名称: 6,7,12,13-tetrahydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazol-5-one, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Ryan, K.S, Drennan, C.L.
登録日2007-08-20
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic trapping in the rebeccamycin biosynthetic enzyme RebC
Proc.Natl.Acad.Sci.Usa, 104, 2007
4IXM
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BU of 4ixm by Molmil
Crystal structure of Zn(II)-bound YjiA GTPase from E. coli
分子名称: SULFATE ION, Uncharacterized GTP-binding protein YjiA, ZINC ION
著者Jost, M, Ryan, K.S, Turo, K.E, Drennan, C.L.
登録日2013-01-26
公開日2013-02-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.
Biochemistry, 52, 2013
6C3B
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BU of 6c3b by Molmil
O2-, PLP-Dependent L-Arginine Hydroxylase RohP Holoenzyme
分子名称: 1,2-ETHANEDIOL, TRIETHYLENE GLYCOL, Uncharacterized protein
著者Hedges, J.B, Ryan, K.S.
登録日2018-01-09
公開日2018-03-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6C3D
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BU of 6c3d by Molmil
O2-, PLP-dependent L-arginine hydroxylase RohP quinonoid II complex
分子名称: (2E,3E)-5-carbamimidamido-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}pent-3-enoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Hedges, J.B, Ryan, K.S.
登録日2018-01-09
公開日2018-03-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6C3A
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BU of 6c3a by Molmil
O2-, PLP-dependent L-arginine hydroxylase RohP 4-hydroxy-2-ketoarginine complex
分子名称: (4S)-5-carbamimidamido-4-hydroxy-2-oxopentanoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Hedges, J.B, Ryan, K.S.
登録日2018-01-09
公開日2018-03-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6C3C
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BU of 6c3c by Molmil
PLP-dependent L-arginine hydroxylase RohP quinonoid I complex
分子名称: (2E)-5-carbamimidamido-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}pentanoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Hedges, J.B, Ryan, K.S.
登録日2018-01-09
公開日2018-03-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6P29
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BU of 6p29 by Molmil
N-demethylindolmycin synthase (PluN2) in complex with N-demethylindolmycin
分子名称: (5S)-2-amino-5-[(1R)-1-(1H-indol-3-yl)ethyl]-1,3-oxazol-4(5H)-one, N-demethylindolmycin synthase (PluN2), TRIETHYLENE GLYCOL
著者Du, Y.L, Higgins, M.A, Zhao, G, Ryan, K.S.
登録日2019-05-21
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Convergent biosynthetic transformations to a bacterial specialized metabolite.
Nat.Chem.Biol., 15, 2019
6P2I
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BU of 6p2i by Molmil
Acyclic imino acid reductase (Bsp5) in complex with NADPH and D-Arg
分子名称: 1,2-ETHANEDIOL, D-ARGININE, Glycerate dehydrogenase, ...
著者Guo, J, Higgins, M.A, Daniel-Ivad, P, Ryan, K.S.
登録日2019-05-21
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献An Asymmetric Reductase That Intercepts Acyclic Imino Acids Producedin Situby a Partner Oxidase.
J.Am.Chem.Soc., 141, 2019
4EIQ
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BU of 4eiq by Molmil
Chromopyrrolic acid-soaked RebC-10x with bound 7-carboxy-K252c
分子名称: (5S)-7-oxo-6,7,12,13-tetrahydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazole-5-carboxylic acid, Putative FAD-monooxygenase
著者Goldman, P.J, Ryan, K.S, Howard-Jones, A.R, Hamill, M.J, Elliott, S.J, Walsh, C.T, Drennan, C.L.
登録日2012-04-05
公開日2012-08-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献An Unusual Role for a Mobile Flavin in StaC-like Indolocarbazole Biosynthetic Enzymes.
Chem.Biol., 19, 2012
4EIP
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BU of 4eip by Molmil
Native and K252c bound RebC-10x
分子名称: 6,7,12,13-tetrahydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazol-5-one, FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-monooxygenase
著者Goldman, P.J, Ryan, K.S, Howard-Jones, A.R, Hamill, M.J, Elliott, S.J, Walsh, C.T, Drennan, C.L.
登録日2012-04-05
公開日2012-08-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.332 Å)
主引用文献An Unusual Role for a Mobile Flavin in StaC-like Indolocarbazole Biosynthetic Enzymes.
Chem.Biol., 19, 2012
8T7J
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BU of 8t7j by Molmil
Oxygen- and PLP-dependent Cap15 holoenzyme bound with phosphate anion
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, Putative selenocysteine synthase
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-06-20
公開日2023-08-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Oxygen, Pyridoxal Phosphate-Dependent Capuramycin Biosynthetic Protein Cap15.
Biochemistry, 62, 2023
8TJI
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BU of 8tji by Molmil
SAM-dependent methyltransferase RedM, apo
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, RedM, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-07-22
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure of methyltransferase RedM that forms the dimethylpyrrolinium of the bisindole reductasporine.
J.Biol.Chem., 300, 2023
8TJJ
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SAM-dependent methyltransferase RedM bound to SAM
分子名称: 1,2-ETHANEDIOL, POTASSIUM ION, RedM, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-07-22
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure of methyltransferase RedM that forms the dimethylpyrrolinium of the bisindole reductasporine.
J.Biol.Chem., 300, 2023
8TJK
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BU of 8tjk by Molmil
SAM-dependent methyltransferase RedM bound to SAH
分子名称: CHLORIDE ION, RedM, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Daniel-Ivad, P, Ryan, K.S.
登録日2023-07-22
公開日2023-12-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of methyltransferase RedM that forms the dimethylpyrrolinium of the bisindole reductasporine.
J.Biol.Chem., 300, 2023
7LR2
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BU of 7lr2 by Molmil
Crystal structure of GH5_18 from Bifidobacterium longum subsp. longum ATCC 55813 in complex with GlcNAc
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl hydrolase BlGH5_18, ...
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-15
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR7
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BU of 7lr7 by Molmil
Crystal structure of GH5_18 from Streptomyces cattleya in complex with GlcNAc
分子名称: 1,2-ETHANEDIOL, 2-(2-ETHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-16
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR6
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BU of 7lr6 by Molmil
Crystal structure of GH5_18-E140A from Bifidobacterium longum subsp. longum ATCC 55813 in complex with Manb1-4GlcNAc
分子名称: Glycosyl hydrolase BlGH5_18, PHOSPHATE ION, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-16
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LQX
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BU of 7lqx by Molmil
Crystal structure of a GH5_18 from Bifidobacterium longum subsp. infantis
分子名称: 1,2-ETHANEDIOL, Glycosyl hydrolase BlGH5_18, SULFATE ION
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-15
公開日2021-04-07
最終更新日2021-04-28
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR1
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BU of 7lr1 by Molmil
Crystal structure of GH5_18 from Bifidobacterium longum subsp. longum ATCC 55813
分子名称: 1,2-ETHANEDIOL, Glycosyl hydrolase BlGH5_18, PHOSPHATE ION
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-15
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7LR8
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BU of 7lr8 by Molmil
Crystal structure of GH5_18-E153A from Streptomyces cattleya in complex with Manb1-4GlcNAc
分子名称: 1,2-ETHANEDIOL, 2-(2-ETHOXYETHOXY)ETHANOL, SULFATE ION, ...
著者Higgins, M.A, Ryan, K.S.
登録日2021-02-16
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献N-Glycan Degradation Pathways in Gut- and Soil-Dwelling Actinobacteria Share Common Core Genes.
Acs Chem.Biol., 16, 2021
7N79
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O2-, PLP-dependent desaturase Plu4 holo-enzyme
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ...
著者Hoffarth, E.R, Ryan, K.S.
登録日2021-06-09
公開日2021-10-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献A shared mechanistic pathway for pyridoxal phosphate-dependent arginine oxidases.
Proc.Natl.Acad.Sci.USA, 118, 2021

 

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