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PDB: 1000 results

6CWK
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BU of 6cwk by Molmil
Anti-RTA VHH antibody
Descriptor: 1,2-ETHANEDIOL, Anti-Ricin antibody, CHLORIDE ION, ...
Authors:Rudolph, M.J, Mantis, N.
Deposit date:2018-03-30
Release date:2019-01-16
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.256 Å)
Cite:Contribution of an unusual CDR2 element of a single domain antibody in ricin toxin binding affinity and neutralizing activity.
Protein Eng. Des. Sel., 31, 2018
6CWG
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BU of 6cwg by Molmil
Ricin catalytic subunit bound go A9 VHH antibody
Descriptor: CHLORIDE ION, Ricin, VHH antibody
Authors:Rudolph, M.J, Mantis, N.
Deposit date:2018-03-30
Release date:2019-01-16
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Contribution of an unusual CDR2 element of a single domain antibody in ricin toxin binding affinity and neutralizing activity.
Protein Eng. Des. Sel., 31, 2018
1KPV
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BU of 1kpv by Molmil
High resolution crystal structure of the MHC class I complex H-2Kb/SEV9
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, H-2 class I histocompatibility antigen, ...
Authors:Rudolph, M.G, Wilson, I.A.
Deposit date:2002-01-02
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:High Resolution Crystal Structure of H-2Kb/VSV8
To be Published
1KPU
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High resolution crystal structure of the MHC class I complex H-2Kb/VSV8
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rudolph, M.G, Wilson, I.A.
Deposit date:2002-01-02
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution Crystal Structure of H-2Kb/VSV8
To be Published
1KJM
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BU of 1kjm by Molmil
TAP-A-associated rat MHC class I molecule
Descriptor: B6 Peptide, RT1 class I histocompatibility antigen, AA alpha chain, ...
Authors:Rudolph, M.G, Stevens, J, Speir, J.A, Trowsdale, J, Butcher, G.W, Joly, E, Wilson, I.A.
Deposit date:2001-12-04
Release date:2002-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of two rat MHC class Ia (RT1-A) molecules that are associated differentially with peptide transporter alleles TAP-A and TAP-B.
J.Mol.Biol., 324, 2002
1MJ4
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BU of 1mj4 by Molmil
Crystal Structure Analysis of the cytochrome b5 domain of human sulfite oxidase
Descriptor: GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Rudolph, M.J, Johnson, J.L, Rajagopalan, K.V, Kisker, C.
Deposit date:2002-08-26
Release date:2002-09-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The 1.2 A structure of the human sulfite oxidase cytochrome b(5) domain.
Acta Crystallogr.,Sect.D, 59, 2003
3TQR
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BU of 3tqr by Molmil
Structure of the phosphoribosylglycinamide formyltransferase (purN) in complex with CHES from Coxiella burnetii
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, Phosphoribosylglycinamide formyltransferase
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3TTH
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BU of 3tth by Molmil
Structure of the spermidine N1-acetyltransferase (speG) from Coxiella burnetii
Descriptor: SULFATE ION, Spermidine N1-acetyltransferase
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-14
Release date:2011-11-09
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3.298 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
1Y1E
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BU of 1y1e by Molmil
human formylglycine generating enzyme
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C-alpha-formyglycine-generating enzyme, CALCIUM ION
Authors:Rudolph, M.G, Dickmanns, A, Ficner, R.
Deposit date:2004-11-18
Release date:2005-05-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme.
Cell(Cambridge,Mass.), 121, 2005
1Y1I
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BU of 1y1i by Molmil
hyuman formylglycine generating enzyme, reduced form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C-alpha-formyglycine-generating enzyme, CALCIUM ION
Authors:Rudolph, M.G, Dickmanns, A, Ficner, R.
Deposit date:2004-11-18
Release date:2005-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme.
Cell(Cambridge,Mass.), 121, 2005
1Y1G
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BU of 1y1g by Molmil
Human formylglycine generating enzyme, double sulfonic acid form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C-alpha-formyglycine-generating enzyme, CALCIUM ION
Authors:Rudolph, M.G, Dickmanns, A, Ficner, R.
Deposit date:2004-11-18
Release date:2005-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme.
Cell(Cambridge,Mass.), 121, 2005
1Y1F
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BU of 1y1f by Molmil
human formylglycine generating enzyme with cysteine sulfenic acid
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C-alpha-formyglycine-generating enzyme, CALCIUM ION
Authors:Rudolph, M.G, Dickmanns, A, Ficner, R.
Deposit date:2004-11-18
Release date:2005-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme.
Cell(Cambridge,Mass.), 121, 2005
1Y1H
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BU of 1y1h by Molmil
human formylglycine generating enzyme, oxidised Cys refined as hydroperoxide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C-alpha-formyglycine-generating enzyme, HYDROGEN PEROXIDE, ...
Authors:Rudolph, M.G, Dickmanns, A, Ficner, R.
Deposit date:2004-11-18
Release date:2005-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme.
Cell(Cambridge,Mass.), 121, 2005
1Y1J
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BU of 1y1j by Molmil
human formylglycine generating enzyme, sulfonic acid/desulfurated form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, C-alpha-formyglycine-generating enzyme, ...
Authors:Rudolph, M.G, Dickmanns, A, Ficner, R.
Deposit date:2004-11-18
Release date:2005-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme.
Cell(Cambridge,Mass.), 121, 2005
3TQL
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BU of 3tql by Molmil
Structure of the amino acid ABC transporter, periplasmic amino acid-binding protein from Coxiella burnetii.
Descriptor: ARGININE, Arginine-binding protein, IMIDAZOLE
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-10-05
Last modified:2016-01-20
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3TQN
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BU of 3tqn by Molmil
Structure of the transcriptional regulator of the GntR family, from Coxiella burnetii.
Descriptor: Transcriptional regulator, GntR family
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3TQT
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BU of 3tqt by Molmil
Structure of the D-alanine-D-alanine ligase from Coxiella burnetii
Descriptor: D-alanine--D-alanine ligase
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3TQP
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BU of 3tqp by Molmil
Structure of an enolase (eno) from Coxiella burnetii
Descriptor: Enolase, MAGNESIUM ION, PHOSPHATE ION
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
4DDQ
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BU of 4ddq by Molmil
Structural plasticity of the Bacillus subtilis GyrA homodimer
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA gyrase subunit A, POTASSIUM ION
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2012-01-19
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mapping the Spectrum of Conformational States of the DNA- and C-Gates in Bacillus subtilis Gyrase.
J.Mol.Biol., 425, 2013
5J57
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BU of 5j57 by Molmil
V5E1-RTA complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ricin, ...
Authors:Rudolph, M.J.
Deposit date:2016-04-01
Release date:2016-12-07
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit.
J. Biol. Chem., 292, 2017
5J56
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BU of 5j56 by Molmil
RTA-V1C7
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Rudolph, M.J.
Deposit date:2016-04-01
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Analysis of Single Domain Antibodies Bound to a Second Neutralizing Hot Spot on Ricin Toxin's Enzymatic Subunit.
J. Biol. Chem., 292, 2017
2B9X
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BU of 2b9x by Molmil
Crystal Structure of CLA-producing fatty acid isomerase from P. acnes
Descriptor: DODECAETHYLENE GLYCOL, FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, ...
Authors:Rudolph, M.G, Liavonchanka, A.
Deposit date:2005-10-13
Release date:2006-01-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and mechanism of the Propionibacterium acnes polyunsaturated fatty acid isomerase
Proc.Natl.Acad.Sci.Usa, 103, 2006
3I32
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BU of 3i32 by Molmil
Dimeric structure of a Hera helicase fragment including the C-terminal RecA domain, the dimerization domain, and the RNA binding domain
Descriptor: BROMIDE ION, Heat resistant RNA dependent ATPase
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2009-06-30
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Thermus thermophilus DEAD box helicase Hera contains a modified RNA recognition motif domain loosely connected to the helicase core.
Rna, 15, 2009
4DDX
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BU of 4ddx by Molmil
Thermotoga maritima reverse gyrase, primitive monoclinic form
Descriptor: Reverse gyrase, ZINC ION
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2012-01-19
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.17 Å)
Cite:Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling.
Nucleic Acids Res., 41, 2013
4DDU
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BU of 4ddu by Molmil
Thermotoga maritima reverse gyrase, C2 FORM 1
Descriptor: Reverse gyrase, ZINC ION
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2012-01-19
Release date:2012-12-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling.
Nucleic Acids Res., 41, 2013

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