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PDB: 128 件

5K3K
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BU of 5k3k by Molmil
Crystal structure of laccase from Thermus thermophilus HB27 (CuSO4, 20 min)
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ...
著者Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
登録日2016-05-19
公開日2017-05-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.644 Å)
主引用文献Preserving metallic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published
5K84
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Crystal structure of laccase from Thermus thermophilus HB27 (sodium nitrate 10 min)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Laccase
著者Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
登録日2016-05-27
公開日2017-06-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Preserving metallic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published
6PWQ
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Crystal structure of Levansucrase from Bacillus subtilis mutant S164A at 2.6 A
分子名称: CALCIUM ION, GLYCEROL, Glycoside hydrolase family 68 protein, ...
著者Diaz-Vilchis, A, Rodriguez-Alegria, M.E, Ortiz-Soto, M.E, Rudino-Pinera, E, Lopez-Munguia, A.
登録日2019-07-23
公開日2020-07-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Implications of the mutation S164A on Bacillus subtilis levansucrase product specificity and insights into protein interactions acting upon levan synthesis.
Int.J.Biol.Macromol., 161, 2020
6Q29
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BU of 6q29 by Molmil
Crystal structure of Laccase from Thermus thermophilus HB27 with an open conformation of beta-hairpin (Average deposted dose 2.5 MGy)
分子名称: COPPER (II) ION, Laccase, TETRAETHYLENE GLYCOL, ...
著者Miranda-Blancas, R, Rudino-Pinera, E.
登録日2019-08-07
公開日2020-08-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献The beta-hairpin from the Thermus thermophilus HB27 laccase works as a pH-dependent switch to regulate laccase activity.
J.Struct.Biol., 213, 2021
7N5L
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BU of 7n5l by Molmil
PCNA from Thermococcus gammatolerans: crystal II, collection 20, 3.07 A, 77.0 MGy
分子名称: DNA polymerase sliding clamp, GLYCEROL, SULFATE ION
著者Marin-Tovar, Y, Rudino-Pinera, E.
登録日2021-06-05
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献PCNA from Thermococcus gammatolerans: A protein involved in chromosomal DNA metabolism intrinsically resistant at high levels of ionizing radiation.
Proteins, 90, 2022
7N5K
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BU of 7n5k by Molmil
PCNA from Thermococcus gammatolerans: crystal II, collection 1, 1.98 A, 3.84 MGy
分子名称: DNA polymerase sliding clamp, GLYCEROL, SULFATE ION
著者Marin-Tovar, Y, Rudino-Pinera, E.
登録日2021-06-05
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献PCNA from Thermococcus gammatolerans: A protein involved in chromosomal DNA metabolism intrinsically resistant at high levels of ionizing radiation.
Proteins, 90, 2022
7N5I
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PCNA from Thermococcus gammatolerans: crystal I, collection 1, 1.95 A, 5.22 MGy
分子名称: DNA polymerase sliding clamp, GLYCEROL, SULFATE ION
著者Marin-Tovar, Y, Rudino-Pinera, E.
登録日2021-06-05
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献PCNA from Thermococcus gammatolerans: A protein involved in chromosomal DNA metabolism intrinsically resistant at high levels of ionizing radiation.
Proteins, 90, 2022
7N5M
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BU of 7n5m by Molmil
PCNA from Thermococcus gammatolerans: crystal III, collection 1, 2.00 A, 1.91 MGy
分子名称: DNA polymerase sliding clamp, GLYCEROL, SULFATE ION
著者Marin-Tovar, Y, Rudino-Pinera, E.
登録日2021-06-05
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献PCNA from Thermococcus gammatolerans: A protein involved in chromosomal DNA metabolism intrinsically resistant at high levels of ionizing radiation.
Proteins, 90, 2022
7N5N
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BU of 7n5n by Molmil
PCNA from Thermococcus gammatolerans: crystal III, collection 15, 2.20 A, 28.7 MGy
分子名称: DNA polymerase sliding clamp, GLYCEROL, SULFATE ION
著者Marin-Tovar, Y, Rudino-Pinera, E.
登録日2021-06-05
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献PCNA from Thermococcus gammatolerans: A protein involved in chromosomal DNA metabolism intrinsically resistant at high levels of ionizing radiation.
Proteins, 90, 2022
7N5J
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BU of 7n5j by Molmil
PCNA from Thermococcus gammatolerans: crystal I, collection 5, 2.82 A, 89.1 MGy
分子名称: DNA polymerase sliding clamp, GLYCEROL, SULFATE ION
著者Marin-Tovar, Y, Rudino-Pinera, E.
登録日2021-06-05
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献PCNA from Thermococcus gammatolerans: A protein involved in chromosomal DNA metabolism intrinsically resistant at high levels of ionizing radiation.
Proteins, 90, 2022
6NSW
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BU of 6nsw by Molmil
X-ray reduced Catalase 3 From N.Crassa in Cpd I state (0.135 MGy)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Catalase-3, ...
著者Zarate-Romero, A, Rudino-Pinera, E, Stojanoff, V.
登録日2019-01-25
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献X-ray driven reduction of Cpd I of Catalase-3 from N. crassa reveals differential sensitivity of active sites and formation of ferrous state.
Arch.Biochem.Biophys., 666, 2019
6NSY
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BU of 6nsy by Molmil
X-ray reduced Catalase 3 From N.Crassa in Cpd I state (0.263 MGy)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Catalase-3, ...
著者Zarate-Romero, A, Rudino-Pinera, E, Stojanoff, V.
登録日2019-01-27
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray driven reduction of Cpd I of Catalase-3 from N. crassa reveals differential sensitivity of active sites and formation of ferrous state.
Arch.Biochem.Biophys., 666, 2019
6NSZ
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BU of 6nsz by Molmil
X-ray reduced Catalase 3 from N.Crassa (0.526 MGy)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Catalase-3, ...
著者Zarate-Romero, A, Rudino-Pinera, E, Stojanoff, V.
登録日2019-01-27
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray driven reduction of Cpd I of Catalase-3 from N. crassa reveals differential sensitivity of active sites and formation of ferrous state.
Arch.Biochem.Biophys., 666, 2019
6NT1
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BU of 6nt1 by Molmil
Catalase 3 from N.Crassa in ferrous state (2.89 MGy)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Catalase-3, ...
著者Zarate-Romero, A, Rudino-Pinera, E, Stojanoff, V.
登録日2019-01-27
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray driven reduction of Cpd I of Catalase-3 from N. crassa reveals differential sensitivity of active sites and formation of ferrous state.
Arch.Biochem.Biophys., 666, 2019
6NT0
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BU of 6nt0 by Molmil
Catalase 3 from N.Crassa in ferrous state, X-ray reduced (1.315 MGy)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Catalase-3, ...
著者Zarate-Romero, A, Rudino-Pinera, E, Stojanoff, V.
登録日2019-01-27
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray driven reduction of Cpd I of Catalase-3 from N. crassa reveals differential sensitivity of active sites and formation of ferrous state.
Arch.Biochem.Biophys., 666, 2019
5A6D
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BU of 5a6d by Molmil
Proliferating Cell Nuclear Antigen, PCNA, from Thermococcus gammatolerans
分子名称: DNA POLYMERASE SLIDING CLAMP
著者Venancio-Landeros, A, Cardona-Felix, C.S, Rudino-Pinera, E.
登録日2015-06-25
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cloning, recombinant production and crystallographic structure of Proliferating Cell Nuclear Antigen from radioresistant archaeon Thermococcus gammatolerans.
Biochem Biophys Rep, 8, 2016
5AFA
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BU of 5afa by Molmil
Crystal structure of Laccase from Thermus thermophilus HB27 complexed with Ag, crystal of the holoenzyme soaked for 30 m in 5 mM AgNO3 at 278 K.
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ...
著者Jimenez-Arroyo, N, Rudino-Pinera, E.
登録日2015-01-19
公開日2016-02-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.193 Å)
主引用文献Structural Function of the Methionine-Rich Beta-Hairpin in the Laccase for T. Thermophilus.
To be Published
5AN1
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BU of 5an1 by Molmil
Crystallographic structure of the Glutathione S-Transferase from Litopenaeus vannamei complexed with Glutathione
分子名称: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE
著者Juarez-Martinez, A.B, Sotelo-Mundo, R, Rudino-Pinera, E.
登録日2015-09-02
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a class-mu glutathione S-transferase from whiteleg shrimp Litopenaeus vannamei: structural changes in the xenobiotic binding H-site may alter the spectra of molecules bound.
J. Biochem. Mol. Toxicol., 31, 2017
4AM1
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BU of 4am1 by Molmil
Crystal structure of the marine crustacean decapod shrimp (Litopenaeus vannamei) arginine kinase in the absence of substrate or ligands.
分子名称: ARGININE KINASE
著者Lopez-Zavala, A.A, Sotelo-Mundo, R.R, Garcia-Orozco, K.D, Isac-Martinez, F, Brieba, L.G, Rudino-Pinera, E.
登録日2012-03-07
公開日2012-07-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystallization and X-Ray Diffraction Studies of Arginine Kinase from the White Pacific Shrimp Litopenaeus Vannamei.
Acta Crystallogr.,Sect.F, 68, 2012
4BIM
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BU of 4bim by Molmil
CATALASE 3 FROM NEUROSPORA CRASSA IN TETRAGONAL FORM EXPOSES A MODIFIED TETRAMERIC ORGANIZATION
分子名称: CATALASE 3, PROTOPORPHYRIN IX CONTAINING FE
著者Zarate-Romero, A, Rudino-Pinera, E.
登録日2013-04-11
公開日2013-04-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Conformational Stability and Crystal Packing: Polymorphism in Neurospora Crassa Cat-3
Acta Crystallogr.,Sect.F, 69, 2013
4BG4
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BU of 4bg4 by Molmil
Crystal structure of Litopenaeus vannamei arginine kinase in a ternary analog complex with arginine, ADP-Mg and NO3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ARGININE, ARGININE KINASE, ...
著者Lopez-Zavala, A.A, Garcia-Orozco, K.D, Carrasco-Miranda, J.S, Sugich-Miranda, R, Velazquez-Contreras, E.F, Criscitiello, M.F, GBrieba, L, Rudino-Pinera, E, Sotelo-Mundo, R.R.
登録日2013-03-22
公開日2013-09-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Crystal Structure of Shrimp Arginine Kinase in Binary Complex with Arginine-A Molecular View of the Phosphagen Precursor Binding to the Enzyme.
J.Bioenerg.Biomembr., 45, 2013
4BHL
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BU of 4bhl by Molmil
Crystal structure of Litopenaeus vannamei arginine kinase in binary complex with arginine
分子名称: ARGININE, ARGININE KINASE, BETA-MERCAPTOETHANOL
著者Lopez-Zavala, A.A, Garcia-Orozco, K.D, Carrasco-Miranda, J.S, Hernandez-Flores, J.M, Sugich-Miranda, R, Velazquez-Contreras, E.F, Criscitiello, M.F, Brieba, L.G, Rudino-Pinera, E, Sotelo-Mundo, R.R.
登録日2013-04-03
公開日2013-09-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Shrimp Arginine Kinase in Binary Complex with Arginine-A Molecular View of the Phosphagen Precursor Binding to the Enzyme.
J.Bioenerg.Biomembr., 45, 2013
6W2K
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BU of 6w2k by Molmil
Crystal structure of laccase from Thermus thermophilus HB27 in reducing conditions (Na2,S2,O2, 20 min)
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ...
著者Miranda-Blancas, R, Rudino-Pinera, E.
登録日2020-03-06
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dynamic behavior of alpha-beta loop at laccase of Thermus thermophilus
To Be Published
6W9X
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BU of 6w9x by Molmil
Crystal structure of Laccase from Thermus thermophilus HB27 with an open conformation of beta-hairpin (Average deposited dose 5.1 MGy)
分子名称: COPPER (II) ION, Laccase, PENTAETHYLENE GLYCOL
著者Miranda-Blancas, R, Rudino-Pinera, E.
登録日2020-03-24
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dynamic behavior of alpha-hairpin loop at laccase of Thermus thermophilus at 1.7 angstroms resolution.
To Be Published
6WCP
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BU of 6wcp by Molmil
Crystal structure of Laccase from Thermus thermophilus HB27 with an open conformation of beta-hairpin (Average deposited dose 20.67 MGy)
分子名称: COPPER (II) ION, GLYCEROL, Laccase, ...
著者Miranda-Blancas, R, Rudino-Pinera, E.
登録日2020-03-31
公開日2021-03-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dynamic behavior of beta-hairpin loop at laccase of Thermus thermophilus at 1.7 angstroms resolution
To Be Published

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件を2024-05-29に公開中

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