6VZD
| N-terminal domain of mouse surfactant protein B (K46E/R51E mutant) with bound lipid | 分子名称: | (7Z,19R,22R)-25-amino-22-hydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphapentacos-7-en-19-yl (9Z)-octadec-9-enoate, Pulmonary surfactant-associated protein B | 著者 | Rapoport, T.A, Bodnar, N.O. | 登録日 | 2020-02-28 | 公開日 | 2020-11-25 | 最終更新日 | 2023-10-11 | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | 主引用文献 | Mechanism of Lamellar Body Formation by Lung Surfactant Protein B. Mol.Cell, 81, 2021
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6VZE
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6W1B
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6VYN
| N-terminal domain of mouse surfactant protein B with bound lipid, wild type | 分子名称: | (7Z,19R,22R)-25-amino-22-hydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphapentacos-7-en-19-yl (9Z)-octadec-9-enoate, Pulmonary surfactant-associated protein B | 著者 | Rapoport, T.A, Bodnar, N.O. | 登録日 | 2020-02-27 | 公開日 | 2020-11-25 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Mechanism of Lamellar Body Formation by Lung Surfactant Protein B. Mol.Cell, 81, 2021
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6VZ0
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3DL8
| Structure of the complex of aquifex aeolicus SecYEG and bacillus subtilis SecA | 分子名称: | Preprotein translocase subunit secY, Protein translocase subunit secA, Protein-export membrane protein secG, ... | 著者 | Nam, Y, Zimmer, J, Rapoport, T.A. | 登録日 | 2008-06-26 | 公開日 | 2008-12-02 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (7.5 Å) | 主引用文献 | Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature, 455, 2008
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4V4N
| Structure of the Methanococcus jannaschii ribosome-SecYEBeta channel complex | 分子名称: | 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein L7AE, ... | 著者 | Menetret, J.F, Park, E, Gumbart, J.C, Ludtke, S.J, Li, W, Whynot, A, Rapoport, T.A, Akey, C.W. | 登録日 | 2013-06-17 | 公開日 | 2014-07-09 | 最終更新日 | 2024-02-28 | 実験手法 | ELECTRON MICROSCOPY (9 Å) | 主引用文献 | Structure of the SecY channel during initiation of protein translocation. Nature, 506, 2013
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6ITC
| Structure of a substrate engaged SecA-SecY protein translocation machine | 分子名称: | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... | 著者 | Ma, C.Y, Wu, X.F, Sun, D.J, Park, E.Y, Rapoport, T.A, Gao, N, Long, L. | 登録日 | 2018-11-21 | 公開日 | 2019-06-12 | 最終更新日 | 2023-11-15 | 実験手法 | ELECTRON MICROSCOPY (3.45 Å) | 主引用文献 | Structure of the substrate-engaged SecA-SecY protein translocation machine. Nat Commun, 10, 2019
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6ND1
| CryoEM structure of the Sec Complex from yeast | 分子名称: | Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ... | 著者 | Wu, X, Cabanos, C, Rapoport, T.A. | 登録日 | 2018-12-13 | 公開日 | 2019-01-09 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | 主引用文献 | Structure of the post-translational protein translocation machinery of the ER membrane. Nature, 566, 2019
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5L0Y
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5L0W
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4YS0
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7R9D
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7RXD
| CryoEM structure of RBD domain of COVID-19 in complex with Legobody | 分子名称: | Fab_8D3_2 heavy chain, Fab_8D3_2 light chain, Maltodextrin-binding protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G, ... | 著者 | Wu, X.D, Rapoport, T.A. | 登録日 | 2021-08-22 | 公開日 | 2021-10-06 | 最終更新日 | 2024-10-16 | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | 主引用文献 | Cryo-EM structure determination of small proteins by nanobody-binding scaffolds (Legobodies). Proc.Natl.Acad.Sci.USA, 118, 2021
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7RXC
| CryoEM structure of KDELR with Legobody | 分子名称: | (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ER lumen protein-retaining receptor 2, Fab_8D3_2 heavy chain, ... | 著者 | Wu, X.D, Rapoport, T.A. | 登録日 | 2021-08-22 | 公開日 | 2021-10-06 | 最終更新日 | 2021-10-20 | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | 主引用文献 | Cryo-EM structure determination of small proteins by nanobody-binding scaffolds (Legobodies). Proc.Natl.Acad.Sci.USA, 118, 2021
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4MLS
| Crystal structure of the SpyTag and SpyCatcher-deltaN1 complex | 分子名称: | Fibronectin binding protein, SpyTag | 著者 | Li, L, Fierer, J.O, Rapoport, T.A, Howarth, M. | 登録日 | 2013-09-06 | 公開日 | 2013-11-13 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (1.984 Å) | 主引用文献 | Structural Analysis and Optimization of the Covalent Association between SpyCatcher and a Peptide Tag. J.Mol.Biol., 426, 2014
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4MLI
| Crystal structure of the SpyTag/SpyCatcher complex | 分子名称: | Fibronectin binding protein, SpyTag | 著者 | Li, L, Fierer, J.O, Rapoport, T.A, Howarth, M. | 登録日 | 2013-09-06 | 公開日 | 2013-11-13 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural Analysis and Optimization of the Covalent Association between SpyCatcher and a Peptide Tag. J.Mol.Biol., 426, 2014
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6CDD
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6CHS
| Cdc48-Npl4 complex in the presence of ATP-gamma-S | 分子名称: | MAGNESIUM ION, Npl4, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... | 著者 | Kim, K.H, Bodnar, N.O, Walz, T, Rapoport, T.A. | 登録日 | 2018-02-22 | 公開日 | 2018-07-04 | 最終更新日 | 2024-03-13 | 実験手法 | ELECTRON MICROSCOPY (4.3 Å) | 主引用文献 | Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4. Nat. Struct. Mol. Biol., 25, 2018
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6OAA
| Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ADP-BeFx, state 1 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ... | 著者 | Twomey, E.C, Ji, Z, Wales, T.E, Bodnar, N.O, Engen, J.R, Rapoport, T.A. | 登録日 | 2019-03-15 | 公開日 | 2019-07-03 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | 主引用文献 | Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding. Science, 365, 2019
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6OA9
| Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ATP | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ... | 著者 | Twomey, E.C, Ji, Z, Wales, T.E, Bodnar, N.O, Engen, J.R, Rapoport, T.A. | 登録日 | 2019-03-15 | 公開日 | 2019-07-03 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (3.9 Å) | 主引用文献 | Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding. Science, 365, 2019
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6OAB
| Cdc48-Npl4 complex processing poly-ubiquitinated substrate in the presence of ADP-BeFx, state 2 | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ... | 著者 | Twomey, E.C, Ji, Z, Wales, T.E, Bodnar, N.O, Engen, J.R, Rapoport, T.A. | 登録日 | 2019-03-15 | 公開日 | 2019-07-03 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (3.6 Å) | 主引用文献 | Substrate processing by the Cdc48 ATPase complex is initiated by ubiquitin unfolding. Science, 365, 2019
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1TF5
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1T16
| Crystal structure of the bacterial fatty acid transporter FadL from Escherichia coli | 分子名称: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COPPER (II) ION, LAURYL DIMETHYLAMINE-N-OXIDE, ... | 著者 | van den Berg, B, Black, P.N, Clemons Jr, W.M, Rapoport, T.A. | 登録日 | 2004-04-15 | 公開日 | 2004-06-15 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure of the long-chain fatty acid transporter FadL. Science, 304, 2004
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1TF2
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