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PDB: 385 件

6UBA
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Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) in complex with laminaritriose
分子名称: Glyco_hydro_cc domain-containing protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
著者Santos, C.R, Vieira, P.S, Domingues, M.N, Cordeiro, R.L, Tomazini, A, Murakami, M.T.
登録日2019-09-11
公開日2020-05-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
6UBD
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Crystal structure of a GH128 (subgroup VII) oligosaccharide-binding protein from Trichoderma gamsii (TgGH128_VII)
分子名称: Glyco_hydro_cc domain-containing protein
著者Santos, C.R, Costa, P.A.C.R, Souza, B.P, Murakami, M.T.
登録日2019-09-11
公開日2020-05-20
最終更新日2020-08-05
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
6UQJ
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Crystal structure of the GH39 enzyme from Xanthomonas axonopodis pv. citri
分子名称: Beta-xylosidase
著者Morais, M.A.B, Polo, C.C, Santos, C.R, Murakami, M.T.
登録日2019-10-20
公開日2020-07-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.707 Å)
主引用文献Exploring the Molecular Basis for Substrate Affinity and Structural Stability in Bacterial GH39 beta-Xylosidases.
Front Bioeng Biotechnol, 8, 2020
6UTL
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BU of 6utl by Molmil
Yeast Thiol Specific antoxidant 2 with C171S mutation and catalytic cysteine alkylated with iodoacetamide
分子名称: Peroxiredoxin TSA2
著者Tairum, C.A, Bannitz-Fernandes, R, Tonoli, C.C.C, Murakami, M.T, de Oliveira, M.A, Netto, L.E.S.
登録日2019-10-29
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Reduction of sulfenic acids by ascorbate in proteins, connecting thiol-dependent to alternative redox pathways.
Free Radic Biol Med, 156, 2020
6UB7
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Crystal structure of a GH128 (subgroup V) exo-beta-1,3-glucanase from Cryptococcus neoformans (CnGH128_V)
分子名称: Glyco_hydro_cc domain-containing protein, POTASSIUM ION
著者Santos, C.R, Costa, P.A.C.R, Murakami, M.T.
登録日2019-09-11
公開日2020-05-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family.
Nat.Chem.Biol., 16, 2020
6UNV
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Crystal structure of a methanol tolerant lipase/esterase from the fungus Rasamsonia emersonii
分子名称: Lipase
著者Vieira, P.S, Milan, N, Murakami, M.T, Zanphorlin, L.M.
登録日2019-10-13
公開日2020-06-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A Novel Fungal Lipase With Methanol Tolerance and Preference for Macaw Palm Oil.
Front Bioeng Biotechnol, 8, 2020
4E4C
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BU of 4e4c by Molmil
Crystal structure of Notexin at 1.8 A resolution
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Phospholipase A2, SULFATE ION
著者Ullah, A, Spencer, P, Murakami, M.T, Arni, R.K.
登録日2012-03-12
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High resolution structure of Notexin
To be Published
4UZS
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BU of 4uzs by Molmil
Crystal structure of Bifidobacterium bifidum beta-galactosidase
分子名称: BETA-GALACTOSIDASE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Godoy, A.S, Murakami, M.T, Camilo, C.M, Bernardes, A, Polikarpov, I.
登録日2014-09-08
公開日2015-09-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal Structure of Beta1-6-Galactosidase from Bifidobacterium Bifidum S17: Trimeric Architecture, Molecular Determinants of the Enzymatic Activity and its Inhibition by Alpah-Galactose.
FEBS J., 283, 2016
6UFV
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Crystal structure of the CBM3 from Bacillus subtilis at 1.06 angstrom resolution
分子名称: DI(HYDROXYETHYL)ETHER, Endoglucanase
著者Morais, M.A.B, Paiva, J.H, Murakami, M.T.
登録日2019-09-25
公開日2020-09-30
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Crystal structure of the CBM3 from Bacillus subtilis at 1.06 angstrom resolution
To Be Published
6UEH
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Crystal structure of a ruminal GH26 endo-beta-1,4-mannanase
分子名称: ACETATE ION, CALCIUM ION, Cow rumen GH26 endo-mannanase
著者Mandelli, F, Morais, M.A.B, Lima, E.A, Persinoti, G.F, Murakami, M.T.
登録日2019-09-21
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Spatially remote motifs cooperatively affect substrate preference of a ruminal GH26-type endo-beta-1,4-mannanase.
J.Biol.Chem., 295, 2020
6UFW
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Crystal structure of the CBM3 from Bacillus subtilis at 1.28 angstrom resolution
分子名称: Endoglucanase
著者Morais, M.A.B, Paiva, J.H, Murakami, M.T.
登録日2019-09-25
公開日2020-09-30
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structure of the CBM3 from Bacillus subtilis at 1.28 angstrom resolution
To Be Published
4W7U
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Crystal structure of XacCel5A in the native form
分子名称: CACODYLATE ION, Cellulase
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of XacCel5A in the native form
To Be Published
4W7W
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High-resolution structure of XacCel5A in complex with cellopentaose
分子名称: Cellulase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献High-resolution structure of XacCel5A in complex with cellopentaose
To Be Published
5NEV
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BU of 5nev by Molmil
CDK2/Cyclin A in complex with compound 73
分子名称: 4-[[6-(3-phenylphenyl)-7~{H}-purin-2-yl]amino]benzenesulfonamide, Cyclin-A2, Cyclin-dependent kinase 2
著者Coxon, C.R, Anscombe, E, Harnor, S.J, Martin, M.P, Carbain, B, Hardcastle, I.R, Harlow, L.K, Korolchuk, S, Matheson, C.J, Noble, M.E.M, Newell, D.R, Turner, D, Sivaprakasam, M, Wang, L.Z, Wong, C, Golding, B.T, Griffin, R.J, Cano, G.
登録日2017-03-12
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Cyclin-Dependent Kinase (CDK) Inhibitors: Structure-Activity Relationships and Insights into the CDK-2 Selectivity of 6-Substituted 2-Arylaminopurines.
J. Med. Chem., 60, 2017
6WIU
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BU of 6wiu by Molmil
Crystal structure of a beta-glucosidase from Exiguobacterium marinum
分子名称: Beta-glucosidase
著者Zanphorlin, L.M, Morais, M.A.B, Murakami, M.T.
登録日2020-04-10
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.511 Å)
主引用文献A rationally identified marine GH1 beta-glucosidase has distinguishing functional features for simultaneous saccharification and fermentation
Biofuels, Bioprod Bioref, 2020
4UCF
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BU of 4ucf by Molmil
Crystal structure of Bifidobacterium bifidum beta-galactosidase in complex with alpha-galactose
分子名称: BETA-GALACTOSIDASE, DI(HYDROXYETHYL)ETHER, N-PROPANOL, ...
著者Godoy, A.S, Murakami, M.T, Camilo, C.M, Bernardes, A, Polikarpov, I.
登録日2014-12-03
公開日2016-01-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal Structure of Beta1-6-Galactosidase from Bifidobacterium Bifidum S17: Trimeric Architecture, Molecular Determinants of the Enzymatic Activity and its Inhibition by Alpha-Galactose.
FEBS J., 283, 2016
4W87
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BU of 4w87 by Molmil
Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with a xyloglucan oligosaccharide
分子名称: MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
7OVA
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BU of 7ova by Molmil
Crystal structure of an AA9 LPMO
分子名称: (2S)-2-hydroxybutanedioic acid, COPPER (II) ION, Endoglucanase, ...
著者Males, A, Correa, T.L.R, Murakami, M.T, Walton, P.H, Davies, G.J.
登録日2021-06-14
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of an AA9 LPMO
To Be Published
4W89
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BU of 4w89 by Molmil
Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with cellotriose
分子名称: MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4W86
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Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with glucose and TRIS
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, ...
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4W88
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Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with a xyloglucan oligosaccharide and TRIS
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, ...
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4W8O
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BU of 4w8o by Molmil
Structure of the luciferase-like enzyme from the nonluminescent Zophobas morio mealworm
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, luciferase-like enzymeAMP-CoA-ligase
著者Santos, C.R, Prado, R.A, Viviani, V, Murakami, M.T.
登録日2014-08-25
公開日2015-10-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of the luciferase-like enzyme from the nonluminescent Zophobas morio mealworm
To Be Published
4W8B
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BU of 4w8b by Molmil
Crystal structure of XEG5B, a GH5 xyloglucan-specific beta-1,4-glucanase from ruminal metagenomic library, in complex with XXLG
分子名称: Exo-xyloglucanase, GLYCEROL, SULFATE ION, ...
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4RW3
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BU of 4rw3 by Molmil
Structural insights into substrate binding of brown spider venom class II phospholipases D
分子名称: D-MYO-INOSITOL-1-PHOSPHATE, DECANOIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Coronado, M.A, Ullah, A, da Silva, L.S, Chaves-Moreira, D, Vuitika, L, Chaim, O.M, Veiga, S.S, Chahine, J, Murakami, M.T, Arni, R.K.
登録日2014-12-01
公開日2015-06-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Insights into Substrate Binding of Brown Spider Venom Class II Phospholipases D.
Curr Protein Pept Sci, 16, 2015
4RW5
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BU of 4rw5 by Molmil
Structural insights into substrate binding of brown spider venom class II phospholipases D
分子名称: GLYCEROL, MAGNESIUM ION, N-TRIDECANOIC ACID, ...
著者Coronado, M.A, Ullah, A, da Silva, L.S, Chaves-Moreira, D, Vuitika, L, Chaim, O.M, Veiga, S.S, Chahine, J, Murakami, M.T, Arni, R.K.
登録日2014-12-01
公開日2015-06-03
最終更新日2015-12-16
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural Insights into Substrate Binding of Brown Spider Venom Class II Phospholipases D.
Curr Protein Pept Sci, 16, 2015

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