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PDB: 384 件

1ZWU
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30 NMR structures of AcAMP2-like peptide with non natural beta-(2-naphthyl)-alanine residue.
分子名称: AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2 (ACMP2)
著者Chavez, M.I, Andreu, C, Vidal, P, Freire, F, Aboitiz, N, Groves, P, Asensio, J.L, Asensio, G, Muraki, M, Canada, F.J, Jimenez-Barbero, J.
登録日2005-06-06
公開日2005-12-06
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献On the Importance of Carbohydrate-Aromatic Interactions for the Molecular Recognition of Oligosaccharides by Proteins: NMR Studies of the Structure and Binding Affinity of AcAMP2-like Peptides with Non-Natural Naphthyl and Fluoroaromatic Residues.
Chemistry, 11, 2005
4MDP
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Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens in complex with glucose
分子名称: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
登録日2013-08-23
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
4DFS
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BU of 4dfs by Molmil
Structure of the catalytic domain of an endo-1,3-beta-glucanase (laminarinase) from Thermotoga petrophila RKU-1
分子名称: CALCIUM ION, Glycoside hydrolase, family 16, ...
著者Meza, A.N, Ruller, R, Prade, R.A, Squina, F.M, Santos, C.R, Murakami, M.T.
登録日2012-01-24
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.754 Å)
主引用文献Structural studies of an endo-1,3-beta-glucanase from Thermotoga petrophila RKU-1
To be Published
4W7U
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Crystal structure of XacCel5A in the native form
分子名称: CACODYLATE ION, Cellulase
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of XacCel5A in the native form
To Be Published
4DAE
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BU of 4dae by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 6-chloroguanosine
分子名称: 6-chloro-9-(beta-D-ribofuranosyl)-9H-purin-2-amine, ACETATE ION, CHLORIDE ION, ...
著者Martins, N.H, Giuseppe, P.O, Meza, A.N, Murakami, M.T.
登録日2012-01-12
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4DAN
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BU of 4dan by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 2-fluoroadenosine
分子名称: 2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Purine nucleoside phosphorylase deoD-type
著者Giuseppe, P.O, Martins, N.H, Meza, A.N, Murakami, M.T.
登録日2012-01-13
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4DA6
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BU of 4da6 by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with ganciclovir
分子名称: 9-(1,3-DIHYDROXY-PROPOXYMETHANE)GUANINE, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Martins, N.H, Giuseppe, P.O, Meza, A.N, Murakami, M.T.
登録日2012-01-12
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4DAO
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Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with adenine
分子名称: ADENINE, GLYCEROL, Purine nucleoside phosphorylase deoD-type
著者Giuseppe, P.O, Martins, N.H, Meza, A.N, Murakami, M.T.
登録日2012-01-13
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4DA8
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Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 8-bromoguanosine
分子名称: 8-bromoguanosine, Purine nucleoside phosphorylase deoD-type
著者Martins, N.H, Giuseppe, P.O, Meza, A.N, Murakami, M.T.
登録日2012-01-12
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
4DAB
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BU of 4dab by Molmil
Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with hypoxanthine
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Martins, N.H, Giuseppe, P.O, Meza, A.N, Murakami, M.T.
登録日2012-01-12
公開日2012-09-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases.
Plos One, 7, 2012
2KQ5
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BU of 2kq5 by Molmil
Solution NMR structure of a section of the repeat domain of the type III effector protein PthA
分子名称: Avirulence protein
著者Neves, J.L, Sforca, M.L, Murakami, M.T, Benedetti, C.E, Zeri, A.C.
登録日2009-10-28
公開日2010-09-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献An NMR-based structural model of the PthA repeat region reveals a TPR fold that would account for protein-protein and protein-DNA interactions
To be Published
4W7V
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BU of 4w7v by Molmil
Crystal structure of XacCel5A in complex with cellobiose
分子名称: Cellulase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Crystal structure of XacCel5A in complex with cellobiose
To Be Published
4DCF
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BU of 4dcf by Molmil
Structure of MTX-II from Bothrops brazili
分子名称: MTX-II chain A, TETRAETHYLENE GLYCOL
著者Ullah, A, Souza, T.A.C.B, Betzel, C, Murakami, M.T, Arni, R.K.
登録日2012-01-17
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystallographic portrayal of different conformational states of a Lys49 phospholipase A2 homologue: insights into structural determinants for myotoxicity and dimeric configuration.
Int.J.Biol.Macromol., 51, 2012
4W85
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BU of 4w85 by Molmil
Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with glucose
分子名称: MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, beta-D-glucopyranose
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4W84
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BU of 4w84 by Molmil
Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in the native form
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4W87
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BU of 4w87 by Molmil
Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with a xyloglucan oligosaccharide
分子名称: MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4UZS
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BU of 4uzs by Molmil
Crystal structure of Bifidobacterium bifidum beta-galactosidase
分子名称: BETA-GALACTOSIDASE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Godoy, A.S, Murakami, M.T, Camilo, C.M, Bernardes, A, Polikarpov, I.
登録日2014-09-08
公開日2015-09-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal Structure of Beta1-6-Galactosidase from Bifidobacterium Bifidum S17: Trimeric Architecture, Molecular Determinants of the Enzymatic Activity and its Inhibition by Alpah-Galactose.
FEBS J., 283, 2016
4W7W
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BU of 4w7w by Molmil
High-resolution structure of XacCel5A in complex with cellopentaose
分子名称: Cellulase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献High-resolution structure of XacCel5A in complex with cellopentaose
To Be Published
6MS3
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BU of 6ms3 by Molmil
Crystal structure of the GH43 protein BlXynB mutant (K247S) from Bacillus licheniformis
分子名称: CALCIUM ION, GLYCEROL, Glycoside Hydrolase Family 43, ...
著者Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
登録日2018-10-16
公開日2019-04-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
133L
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BU of 133l by Molmil
ROLE OF ARG 115 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME. X-RAY STRUCTURE OF HIS 115 AND GLU 115 MUTANTS
分子名称: HUMAN LYSOZYME
著者Harata, K, Muraki, M, Jigami, Y.
登録日1993-06-01
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Role of Arg115 in the catalytic action of human lysozyme. X-ray structure of His115 and Glu115 mutants.
J.Mol.Biol., 233, 1993
134L
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ROLE OF ARG 115 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME. X-RAY STRUCTURE OF HIS 115 AND GLU 115 MUTANTS
分子名称: HUMAN LYSOZYME
著者Harata, K, Muraki, M, Jigami, Y.
登録日1993-06-01
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Role of Arg115 in the catalytic action of human lysozyme. X-ray structure of His115 and Glu115 mutants.
J.Mol.Biol., 233, 1993
6MS2
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BU of 6ms2 by Molmil
Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis
分子名称: CALCIUM ION, Glycoside Hydrolase Family 43
著者Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
登録日2018-10-16
公開日2019-04-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.494 Å)
主引用文献Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
4RW3
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BU of 4rw3 by Molmil
Structural insights into substrate binding of brown spider venom class II phospholipases D
分子名称: D-MYO-INOSITOL-1-PHOSPHATE, DECANOIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Coronado, M.A, Ullah, A, da Silva, L.S, Chaves-Moreira, D, Vuitika, L, Chaim, O.M, Veiga, S.S, Chahine, J, Murakami, M.T, Arni, R.K.
登録日2014-12-01
公開日2015-06-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Insights into Substrate Binding of Brown Spider Venom Class II Phospholipases D.
Curr Protein Pept Sci, 16, 2015
6WIU
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BU of 6wiu by Molmil
Crystal structure of a beta-glucosidase from Exiguobacterium marinum
分子名称: Beta-glucosidase
著者Zanphorlin, L.M, Morais, M.A.B, Murakami, M.T.
登録日2020-04-10
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.511 Å)
主引用文献A rationally identified marine GH1 beta-glucosidase has distinguishing functional features for simultaneous saccharification and fermentation
Biofuels, Bioprod Bioref, 2020
4UCF
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BU of 4ucf by Molmil
Crystal structure of Bifidobacterium bifidum beta-galactosidase in complex with alpha-galactose
分子名称: BETA-GALACTOSIDASE, DI(HYDROXYETHYL)ETHER, N-PROPANOL, ...
著者Godoy, A.S, Murakami, M.T, Camilo, C.M, Bernardes, A, Polikarpov, I.
登録日2014-12-03
公開日2016-01-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal Structure of Beta1-6-Galactosidase from Bifidobacterium Bifidum S17: Trimeric Architecture, Molecular Determinants of the Enzymatic Activity and its Inhibition by Alpha-Galactose.
FEBS J., 283, 2016

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件を2024-08-07に公開中

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