5EK6
| Thermostable aldehyde dehydrogenase from Pyrobaculum sp. 1860 complexed with NADP and isobutyraldehyde | Descriptor: | 2-methylpropanal, Aldehyde dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Petrova, T.E, Bezsudnova, E.Y, Boyko, K.M, Polyakov, K.M, Rakitina, T.V, Popov, V.O. | Deposit date: | 2015-11-03 | Release date: | 2016-11-16 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.66 Å) | Cite: | NADP-Dependent Aldehyde Dehydrogenase from ArchaeonPyrobaculum sp.1860: Structural and Functional Features. Archaea, 2016, 2016
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3JTM
| Structure of recombinant formate dehydrogenase from Arabidopsis thaliana | Descriptor: | AZIDE ION, Formate dehydrogenase, mitochondrial, ... | Authors: | Timofeev, V.I, Shabalin, I.G, Serov, A.E, Polyakov, K.M, Popov, V.O, Tishkov, V.I, Kuranova, I.P, Samigina, V.R. | Deposit date: | 2009-09-13 | Release date: | 2010-09-15 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Structure of recombinant formate dehydrogenase from Arabidopsis thaliana to be published
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2VQX
| Precursor of Protealysin, Metalloproteinase from Serratia proteamaculans. | Descriptor: | METALLOPROTEINASE, ZINC ION | Authors: | Melik-Adamyan, W.R, Kuranova, I.P, Polyakov, K.M, Demidyuk, I.V, Gromova, T.Y, Kostrov, S.V. | Deposit date: | 2008-03-20 | Release date: | 2009-05-26 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.821 Å) | Cite: | Crystal Structure of the Protealysin Precursor: Insights Into Propeptide Function. J.Biol.Chem., 285, 2010
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3V9E
| Structure of the L499M mutant of the laccase from B.aclada | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, GLYCEROL, ... | Authors: | Osipov, E.M, Polyakov, K.M, Tikhonova, T.V, Dorovatovsky, P.V, Ludwig, R, Kittl, R, Shleev, S.V, Popov, V.O. | Deposit date: | 2011-12-27 | Release date: | 2013-01-23 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Effect of the L499M mutation of the ascomycetous Botrytis aclada laccase on redox potential and catalytic properties. Acta Crystallogr.,Sect.D, 70, 2014
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4Q4U
| TvNiR in complex with sulfite, low dose data set | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ... | Authors: | Lazarenko, V.A, Polyakov, K.M, Trofimov, A.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | Deposit date: | 2014-04-15 | Release date: | 2014-09-03 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (1.62 Å) | Cite: | X-ray-induced changes in the active site structure of octaheme cytochrome c nitrite reductase and its substrate complexes to be published
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4Q0T
| Free form of TvNiR, low dose data set | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CITRIC ACID, ... | Authors: | Lazarenko, V.A, Polyakov, K.M, Trofimov, A.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | Deposit date: | 2014-04-02 | Release date: | 2014-09-10 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | X-ray-induced changes in the active site structure of octaheme cytochrome c nitrite reductase and its substrate complexes TO BE PUBLISHED
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4Q17
| Free form of TvNiR, middle dose data set | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CITRIC ACID, ... | Authors: | Lazarenko, V.A, Polyakov, K.M, Trofimov, A.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | Deposit date: | 2014-04-03 | Release date: | 2014-09-10 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | X-ray-induced changes in the active site structure of octaheme cytochrome c nitrite reductase and its substrate complexes To be published
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4Q5B
| TvNiR in complex with sulfite, high dose data set | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ... | Authors: | Lazarenko, V.A, Polyakov, K.M, Trofimov, A.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | Deposit date: | 2014-04-16 | Release date: | 2014-09-10 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | X-ray-induced changes in the active site structure of octaheme cytochrome c nitrite reductase and its substrate complexes To be Published
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4Q1O
| Free form of TvNiR, high dose data set | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CITRIC ACID, ... | Authors: | Lazarenko, V.A, Polyakov, K.M, Trofimov, A.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | Deposit date: | 2014-04-04 | Release date: | 2014-09-10 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | X-ray-induced changes in the active site structure of octaheme cytochrome c nitrite reductase and its substrate complexes To be Published
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4Q5C
| TvNiR in complex with sulfite, middle dose data set | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ... | Authors: | Lazarenko, V.A, Polyakov, K.M, Trofimov, A.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | Deposit date: | 2014-04-16 | Release date: | 2014-09-03 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (1.62 Å) | Cite: | X-ray-induced changes in the active site structure of octaheme cytochrome c nitrite reductase and its substrate complexes To be Published
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5F75
| Thiocyanate dehydrogenase from Thioalkalivibrio paradoxus | Descriptor: | COPPER (II) ION, Thiocyanate dehydrogenase | Authors: | Tsallagov, S.I, Polyakov, K.M, Tikhonova, T.V, Trofimov, A.A, Shabalin, I.G, Popov, A.N, Popov, V.O. | Deposit date: | 2015-12-07 | Release date: | 2016-12-14 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Thiocyanate dehydrogenase from Thioalkalivibrio paradoxus To Be Published
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4R2X
| Unique conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis uridine phosphorylase in the free form and in complex with uridine | Descriptor: | CHLORIDE ION, GLYCEROL, SULFATE ION, ... | Authors: | Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Veiko, V.P, Popov, V.O, Polyakov, K.M. | Deposit date: | 2014-08-13 | Release date: | 2014-12-10 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (0.93 Å) | Cite: | High-syn conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis MR-1 uridine phosphorylase in the free form and in complex with uridine. Acta Crystallogr.,Sect.D, 70, 2014
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2GSD
| NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C2 in complex with NAD and azide | Descriptor: | AZIDE ION, NAD-dependent formate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | Authors: | Filippova, E.V, Polyakov, K.M, Tikhonova, T.V, Sadykhov, I.G, Shabalin, I.G, Tishkov, V.I, Popov, V.O. | Deposit date: | 2006-04-26 | Release date: | 2006-05-09 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft. Acta Crystallogr.,Sect.D, 65, 2009
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4EQ5
| DNA ligase from the archaeon Thermococcus sibiricus | Descriptor: | ADENOSINE MONOPHOSPHATE, DNA ligase | Authors: | Petrova, T, Bezsudnova, E.Y, Dorokhov, B.D, Slutskaya, E.S, Polyakov, K.M, Dorovatovskiy, P.V, Ravin, N.V, Skryabin, K.G, Kovalchuk, M.V, Popov, V.O. | Deposit date: | 2012-04-18 | Release date: | 2012-05-09 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Expression, purification, crystallization and preliminary crystallographic analysis of a thermostable DNA ligase from the archaeon Thermococcus sibiricus. Acta Crystallogr.,Sect.F, 68, 2012
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4FFK
| X-ray structure of iron superoxide dismutase from Acidilobus saccharovorans | Descriptor: | FE (III) ION, Superoxide dismutase | Authors: | Safonova, T.N, Slutskaya, E.S, Dorovatovsky, P.V, Bezsudnova, E.Yu, Mardanov, A.V, Gumerov, V.M, Ravin, N.V, Skryabin, K.G, Popov, V.O, Polyakov, K.M. | Deposit date: | 2012-06-01 | Release date: | 2012-06-27 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.76 Å) | Cite: | X-ray structure of iron superoxide dismutase from Acidilobus saccharovorans TO BE PUBLISHED
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3UU9
| Structure of the free TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase | Descriptor: | CALCIUM ION, Eight-heme nitrite reductase, HEME C, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Tikhonova, T.V, Tikhonov, A.V, Dorovatovskii, P.V, Popov, V.O. | Deposit date: | 2011-11-28 | Release date: | 2012-01-25 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D, 68, 2012
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1M38
| Structure of Inorganic Pyrophosphatase | Descriptor: | COBALT (II) ION, INORGANIC PYROPHOSPHATASE, PHOSPHATE ION | Authors: | Kuranova, I.P, Polyakov, K.M, Levdikov, V.M, Smirnova, E.A, Hohne, W.E, Lamzin, V.S, Meijers, R. | Deposit date: | 2002-06-27 | Release date: | 2003-01-28 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Three-dimensional structure of Saccharomyces cerevisiae inorganic pyrophosphatase complexed with cobalt and phosphate ions CRYSTALLOGRAPHY REPORTS, 48, 2003
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4HA4
| Structure of beta-glycosidase from Acidilobus saccharovorans in complex with glycerol | Descriptor: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Beta-galactosidase, GLYCEROL, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Tikhonov, A.V, Bezsudnova, E.Y, Dorovatovskii, P.V, Gumerov, V.M, Ravin, N.V, Skryabin, K.G, Popov, V.O. | Deposit date: | 2012-09-25 | Release date: | 2012-10-10 | Last modified: | 2013-09-04 | Method: | X-RAY DIFFRACTION (1.37 Å) | Cite: | Structures of beta-glycosidase from Acidilobus saccharovorans in complexes with tris and glycerol. Dokl.Biochem.Biophys., 449
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4HA3
| Structure of beta-glycosidase from Acidilobus saccharovorans in complex with Tris | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-galactosidase, DI(HYDROXYETHYL)ETHER, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Tikhonov, A.V, Bezsudnova, E.Y, Dorovatovskii, P.V, Gumerov, V.M, Ravin, N.V, Skryabin, K.G, Popov, V.O. | Deposit date: | 2012-09-25 | Release date: | 2012-10-10 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.46 Å) | Cite: | Structures of beta-glycosidase from Acidilobus saccharovorans in complexes with tris and glycerol. Dokl.Biochem.Biophys., 449
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3FO3
| Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase reduced by sodium dithionite (sulfite complex) | Descriptor: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | Deposit date: | 2008-12-27 | Release date: | 2009-12-29 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide Acta Crystallogr.,Sect.D, 66, 2010
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3F29
| Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite | Descriptor: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CALCIUM ION, Eight-heme nitrite reductase, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | Deposit date: | 2008-10-29 | Release date: | 2008-12-09 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Binding of sulfite by the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase To be Published
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3LG1
| Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase reduced by sodium borohydride (in complex with sulfite) | Descriptor: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CALCIUM ION, Eight-heme nitrite reductase, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Dorovatovsky, P.V, Tikhonova, T.V, Popov, V.O. | Deposit date: | 2010-01-19 | Release date: | 2010-12-29 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D, 68, 2012
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3LGQ
| Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite (modified Tyr-303) | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Tikhonova, T.V, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | Deposit date: | 2010-01-21 | Release date: | 2011-02-16 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D, 68, 2012
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3MMO
| Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with cyanide | Descriptor: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ... | Authors: | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Tikhonova, T.V, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | Deposit date: | 2010-04-20 | Release date: | 2010-09-29 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide. Acta Crystallogr.,Sect.D, 66, 2010
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3FN4
| Apo-form of NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C-1 in closed conformation | Descriptor: | GLYCEROL, NAD-dependent formate dehydrogenase, SULFATE ION | Authors: | Shabalin, I.G, Polyakov, K.M, Filippova, E.V, Dorovatovskiy, P.V, Tikhonova, T.V, Sadykhov, E.G, Tishkov, V.I, Popov, V.O. | Deposit date: | 2008-12-23 | Release date: | 2009-12-01 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.96 Å) | Cite: | Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft Acta Crystallogr.,Sect.D, 65, 2009
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