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PDB: 54 results

1QAC
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BU of 1qac by Molmil
CHANGE IN DIMERIZATION MODE BY REMOVAL OF A SINGLE UNSATISFIED POLAR RESIDUE
Descriptor: IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN
Authors:Pokkuluri, P.R, Cai, X, Johnson, G, Stevens, F.J, Schiffer, M.
Deposit date:1999-02-25
Release date:2000-02-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Change in dimerization mode by removal of a single unsatisfied polar residue located at the interface.
Protein Sci., 9, 2000
1MRE
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BU of 1mre by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: GUANOSINE-5'-DIPHOSPHATE, IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1MRC
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BU of 1mrc by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1MRD
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BU of 1mrd by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1RWJ
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BU of 1rwj by Molmil
c7-type three-heme cytochrome domain
Descriptor: Cytochrome c family protein, HEME C
Authors:Pokkuluri, P.R, Londer, Y.Y, Duke, N.E.C, Erickson, J, Pessanha, M, Salgueiro, C.A, Schiffer, M.
Deposit date:2003-12-16
Release date:2004-08-03
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a novel c7-type three-heme cytochrome domain from a multidomain cytochrome c polymer.
Protein Sci., 13, 2004
1MRF
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BU of 1mrf by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: 2'-DEOXYINOSINE-5'-MONOPHOSPHATE, IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1OS6
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BU of 1os6 by Molmil
Cytochrome c7 (PpcA) from Geobacter sulfurreducens
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, HEME C, PpcA, ...
Authors:Pokkuluri, P.R, Londer, Y.Y, Duke, N.E.C, Long, W.C, Schiffer, M.
Deposit date:2003-03-18
Release date:2004-02-03
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Family of cytochrome c7-type proteins from Geobacter sulfurreducens: structure of one cytochrome c7 at 1.45 A resolution.
Biochemistry, 43, 2004
4K08
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BU of 4k08 by Molmil
Periplasmic sensor domain of chemotaxis protein, Adeh_3718
Descriptor: ACETATE ION, Methyl-accepting chemotaxis sensory transducer, ZINC ION
Authors:Pokkuluri, P.R, Mack, J.C, Bearden, J, Rakowski, E, Schiffer, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-04-03
Release date:2013-07-17
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: structure of one sensor domain from a histidine kinase and another from a chemotaxis protein.
Microbiologyopen, 2, 2013
4K0D
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BU of 4k0d by Molmil
Periplasmic sensor domain of sensor histidine kinase, Adeh_2942
Descriptor: ACETATE ION, CHLORIDE ION, Periplasmic sensor hybrid histidine kinase, ...
Authors:Pokkuluri, P.R, Mack, J.C, Bearden, J, Rakowski, E, Schiffer, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-04-03
Release date:2013-06-12
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: structure of one sensor domain from a histidine kinase and another from a chemotaxis protein.
Microbiologyopen, 2, 2013
3DTS
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BU of 3dts by Molmil
E(L212)A, D(L213)A, R(M233)L triple mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-15
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural description of compensatory mutations that restore proton transfer pathways to the L212-L213A mutant bacterial reaction center
To be Published
3DU2
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BU of 3du2 by Molmil
E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-16
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
To be Published
3BXU
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BU of 3bxu by Molmil
PpcB, A Cytochrome c7 from Geobacter sulfurreducens
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-01-14
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural insights into the modulation of the redox properties of two Geobacter sulfurreducens homologous triheme cytochromes.
Biochim.Biophys.Acta, 1777, 2008
3DTR
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BU of 3dtr by Molmil
E(L212)Q, L(L227)F double mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-15
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Restoring proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
3B47
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BU of 3b47 by Molmil
Periplasmic sensor domain of chemotaxis protein GSU0582
Descriptor: Methyl-accepting chemotaxis protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2007-10-23
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3DSY
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BU of 3dsy by Molmil
E(L212)Q mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-14
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Restoring Proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
3DTA
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BU of 3dta by Molmil
E(L212)Q, N(M44)D double mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-14
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Restoring proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
3DU3
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BU of 3du3 by Molmil
E(L212)A, D(L213)A, A(M249)Y triple mutant structure of photosynthetic reaction center
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-16
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:E(L212)A, D(L213)A, A(M249)Y triple mutant structure of photosynthetic reaction center
To be Published
3CU4
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BU of 3cu4 by Molmil
OmcF, Outer membrance cytochrome F from Geobacter sulfurreducens
Descriptor: Cytochrome c family protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-04-15
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Outer membrane cytochrome c, OmcF, from Geobacter sulfurreducens: High structural similarity to an algal cytochrome c(6).
Proteins, 74, 2008
3B42
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BU of 3b42 by Molmil
Periplasmic sensor domain of chemotaxis protein GSU0935
Descriptor: Methyl-accepting chemotaxis protein, putative, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2007-10-23
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3DUQ
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BU of 3duq by Molmil
E(L212)A, D(L213)A, N(M5)D triple mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-17
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural description of compensatory mutations that restore proton transfer pathways to the L212A-L213A mutant bacterial reaction center
To be Published
1CD0
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BU of 1cd0 by Molmil
STRUCTURE OF HUMAN LAMDA-6 LIGHT CHAIN DIMER JTO
Descriptor: PROTEIN (JTO, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-05
Release date:2000-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
1EK3
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BU of 1ek3 by Molmil
KAPPA-4 IMMUNOGLOBULIN VL, REC
Descriptor: CALCIUM ION, CHLORIDE ION, KAPPA-4 IMMUNOGLOBULIN LIGHT CHAIN VL
Authors:Pokkuluri, P.R, Huang, D.-B, Raffen, R, Stevens, F.J, Schiffer, M.
Deposit date:2000-03-06
Release date:2001-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of Amyloidogenic Kappa-4 Immunoglobulin VL, REC
To be Published
1EEU
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BU of 1eeu by Molmil
M4L/Y(27D)D/Q89D/T94H mutant of LEN
Descriptor: ISOPROPYL ALCOHOL, KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN)
Authors:Pokkuluri, P.R, Cai, X, Gu, M, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-03
Release date:2001-02-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Factors contributing to decreased protein stability when aspartic acid residues are in beta-sheet regions.
Protein Sci., 11, 2002
1EFQ
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BU of 1efq by Molmil
Q38D mutant of LEN
Descriptor: KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN), URANYL (VI) ION, ZINC ION
Authors:Pokkuluri, P.R, Cai, X, Gu, M, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-09
Release date:2001-02-09
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Factors contributing to decreased protein stability when aspartic acid residues are in beta-sheet regions.
Protein Sci., 11, 2002
1EEQ
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BU of 1eeq by Molmil
M4L/Y(27D)D/T94H Mutant of LEN
Descriptor: KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN)
Authors:Pokkuluri, P.R, Raffen, R, Dieckman, L, Boogaard, C, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-01
Release date:2001-02-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Increasing protein stability by polar surface residues: domain-wide consequences of interactions within a loop.
Biophys.J., 82, 2002

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