Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 123 results

6TEH
DownloadVisualize
BU of 6teh by Molmil
Baseplate of native GTA particle computed with C3 symmetry
Descriptor: IRON/SULFUR CLUSTER, Putative gene transfer agent protein
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-12
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEA
DownloadVisualize
BU of 6tea by Molmil
Tail of native GTA particle computed with helical refinement, C6 symmetry
Descriptor: Phage major tail protein, TP901-1 family
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6HBL
DownloadVisualize
BU of 6hbl by Molmil
Echovirus 18 Open particle without three pentamers
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
5LK8
DownloadVisualize
BU of 5lk8 by Molmil
single particle reconstruction of slow bee paralysis virus empty particle
Descriptor: VP1, VP2, VP3
Authors:Kalynych, S, Fuzik, T, Plevka, P.
Deposit date:2016-07-21
Release date:2017-01-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryo-EM study of slow bee paralysis virus at low pH reveals iflavirus genome release mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LVC
DownloadVisualize
BU of 5lvc by Molmil
Aichi virus 1: empty particle
Descriptor: VP0, VP1, VP3
Authors:Sabin, C, Fuzik, T, Skubnik, K, Palkova, L, Lindberg, A.M, Plevka, P.
Deposit date:2016-09-13
Release date:2016-12-14
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of Aichi Virus 1 and Its Empty Particle: Clues to Kobuvirus Genome Release Mechanism.
J.Virol., 90, 2016
5LWG
DownloadVisualize
BU of 5lwg by Molmil
Israeli acute paralysis virus heated to 63 degree - full particle
Descriptor: VP1, VP2, VP3, ...
Authors:Mullapudi, E, Fuzik, T, Pridal, A, Plevka, P.
Deposit date:2016-09-16
Release date:2016-11-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-electron Microscopy Study of the Genome Release of the Dicistrovirus Israeli Acute Bee Paralysis Virus.
J. Virol., 91, 2017
5LWI
DownloadVisualize
BU of 5lwi by Molmil
Israeli acute paralysis virus heated to 63 degree - empty particle
Descriptor: Structural polyprotein, VP1, VP2
Authors:Mullapudi, E, Fuzik, T, Pridal, A, Plevka, P.
Deposit date:2016-09-16
Release date:2016-11-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-electron Microscopy Study of the Genome Release of the Dicistrovirus Israeli Acute Bee Paralysis Virus.
J. Virol., 91, 2017
6TEB
DownloadVisualize
BU of 6teb by Molmil
Tail-baseplate interface of native GTA particle computed with C6 symmetry
Descriptor: Distal tail protein Rcc01695, Tail tube protein Rcc01691
Authors:Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6HBK
DownloadVisualize
BU of 6hbk by Molmil
Echovirus 18 Open particle without one pentamer
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6IAW
DownloadVisualize
BU of 6iaw by Molmil
Structure of head fiber and inner core protein gp22 of native bacteriophage P68
Descriptor: Arstotzka protein, Head fiber, Major head protein, ...
Authors:Hrebik, D, Skubnik, K, Fuzik, T, Plevka, P.
Deposit date:2018-11-27
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6HHT
DownloadVisualize
BU of 6hht by Molmil
Echovirus 18 Open particle without two pentamers
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-29
Release date:2019-03-20
Last modified:2019-04-10
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
5LK7
DownloadVisualize
BU of 5lk7 by Molmil
Single particle reconstruction of slow bee paralysis virus virion at pH 5.5
Descriptor: VP1, VP2, VP3
Authors:Kalynych, S, Fuzik, T, Plevka, P.
Deposit date:2016-07-21
Release date:2017-02-15
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryo-EM study of slow bee paralysis virus at low pH reveals iflavirus genome release mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5M48
DownloadVisualize
BU of 5m48 by Molmil
Coiled coil domain of Rtt103p
Descriptor: Regulator of Ty1 transposition protein 103
Authors:Jasnovidova, O, Kalynych, S, Plevka, P, Stefl, R.
Deposit date:2016-10-18
Release date:2017-10-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.593 Å)
Cite:Structure and dynamics of the RNAPII CTDsome with Rtt103.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LI4
DownloadVisualize
BU of 5li4 by Molmil
bacteriophage phi812K1-420 tail sheath protein after contraction
Descriptor: tail sheath protein
Authors:Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P.
Deposit date:2016-07-14
Release date:2017-07-19
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LI2
DownloadVisualize
BU of 5li2 by Molmil
bacteriophage phi812K1-420 tail sheath and tail tube protein in native tail
Descriptor: Phage-like element PBSX protein XkdM, tail sheath protein
Authors:Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P.
Deposit date:2016-07-14
Release date:2017-07-19
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5MQC
DownloadVisualize
BU of 5mqc by Molmil
Structure of black queen cell virus
Descriptor: VP1, VP2, VP3
Authors:Spurny, R, Kiem, H.H.T, Plevka, P.
Deposit date:2016-12-20
Release date:2017-01-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Virion Structure of Black Queen Cell Virus, a Common Honeybee Pathogen.
J. Virol., 91, 2017
6HBG
DownloadVisualize
BU of 6hbg by Molmil
Echovirus 18 native particle
Descriptor: Echovirus 18 viral protein 1, Echovirus 18 viral protein 2, Echovirus 18 viral protein 3, ...
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6IAT
DownloadVisualize
BU of 6iat by Molmil
Icosahedrally averaged capsid of bacteriophage P68
Descriptor: Arstotzka protein, Major head protein
Authors:Hrebik, D, Skubnik, K, Fuzik, T, Plevka, P.
Deposit date:2018-11-27
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6HBH
DownloadVisualize
BU of 6hbh by Molmil
Echovirus 18 A-particle
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6IAC
DownloadVisualize
BU of 6iac by Molmil
Portal and tail of native bacteriophage P68
Descriptor: Lower collar protein, Minor structural protein, Portal protein, ...
Authors:Hrebik, D, Skubnik, K, Fuzik, T, Plevka, P.
Deposit date:2018-11-26
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6HBJ
DownloadVisualize
BU of 6hbj by Molmil
Echovirus 18 empty particle
Descriptor: Viral protein 1, Viral protein 2, Viral protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-10
Release date:2019-03-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6IAB
DownloadVisualize
BU of 6iab by Molmil
Tail fiber of Staphylococcus aureus phage P68
Descriptor: Tail Fiber of phage P68
Authors:Hrebik, D, Karel, S, Plevka, P.
Deposit date:2018-11-26
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6IB1
DownloadVisualize
BU of 6ib1 by Molmil
Icosahedrally averaged capsid of empty particle of bacteriophage P68
Descriptor: Major head protein, Uncharacterized protein
Authors:Hrebik, D, Skubnik, K, Fuzik, T, Plevka, P.
Deposit date:2018-11-28
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019

221051

数据于2024-06-12公开中

PDB statisticsPDBj update infoContact PDBjnumon