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PDB: 125 件

6TSV
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BU of 6tsv by Molmil
Tail of empty GTA particle computed with helical refinement, C6 symmetry
分子名称: Tail tube protein Rcc01691
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-21
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.78 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSW
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BU of 6tsw by Molmil
Isometric capsid of empty GTA particle computed with I4(I,n25r) symmetry
分子名称: Major capsid protein Rcc01687
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-21
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6HBJ
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BU of 6hbj by Molmil
Echovirus 18 empty particle
分子名称: Viral protein 1, Viral protein 2, Viral protein 3
著者Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
登録日2018-08-10
公開日2019-03-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
5L8Q
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BU of 5l8q by Molmil
Structure of deformed wing virus, a honeybee pathogen
分子名称: URIDINE-5'-MONOPHOSPHATE, VP1, VP2, ...
著者Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P.
登録日2016-06-08
公開日2017-03-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MQC
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BU of 5mqc by Molmil
Structure of black queen cell virus
分子名称: VP1, VP2, VP3
著者Spurny, R, Kiem, H.H.T, Plevka, P.
登録日2016-12-20
公開日2017-01-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Virion Structure of Black Queen Cell Virus, a Common Honeybee Pathogen.
J. Virol., 91, 2017
6IB1
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BU of 6ib1 by Molmil
Icosahedrally averaged capsid of empty particle of bacteriophage P68
分子名称: Major head protein, Uncharacterized protein
著者Hrebik, D, Skubnik, K, Fuzik, T, Plevka, P.
登録日2018-11-28
公開日2019-11-06
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6TEH
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BU of 6teh by Molmil
Baseplate of native GTA particle computed with C3 symmetry
分子名称: IRON/SULFUR CLUSTER, Putative gene transfer agent protein
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-12
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TOA
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BU of 6toa by Molmil
Neck of empty GTA particle computed with C6 symmetry
分子名称: Adaptor protein Rcc01688, Portal protein Rcc01684, Stopper protein Rcc01689, ...
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEA
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BU of 6tea by Molmil
Tail of native GTA particle computed with helical refinement, C6 symmetry
分子名称: Phage major tail protein, TP901-1 family
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TO8
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BU of 6to8 by Molmil
Neck of empty GTA particle computed with C12 symmetry
分子名称: Adaptor protein Rcc01688, Portal protein Rcc01684
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6IAB
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BU of 6iab by Molmil
Tail fiber of Staphylococcus aureus phage P68
分子名称: Tail Fiber of phage P68
著者Hrebik, D, Karel, S, Plevka, P.
登録日2018-11-26
公開日2019-11-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
5L7Q
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BU of 5l7q by Molmil
Structure of deformed wing virus, a honeybee pathogen
分子名称: VP1, vp2, vp3
著者Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P.
登録日2016-06-03
公開日2017-03-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5J98
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BU of 5j98 by Molmil
Crystal structure of Slow Bee Paralysis Virus at 2.6A resolution
分子名称: VP1, VP2, VP3
著者Kalynych, S, Levdansky, Y, Palkova, L, Plevka, P.
登録日2016-04-08
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Virion Structure of Iflavirus Slow Bee Paralysis Virus at 2.6-Angstrom Resolution.
J.Virol., 90, 2016
4BTG
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BU of 4btg by Molmil
Coordinates of the bacteriophage phi6 capsid subunits (P1A and P1B) fitted into the cryoEM reconstruction of the procapsid at 4.4 A resolution
分子名称: MAJOR INNER PROTEIN P1
著者Nemecek, D, Boura, E, Wu, W, Cheng, N, Plevka, P, Qiao, J, Mindich, L, Heymann, J.B, Hurley, J.H, Steven, A.C.
登録日2013-06-17
公開日2013-08-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Subunit Folds and Maturation Pathway of a Dsrna Virus Capsid.
Structure, 21, 2013
5LIJ
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BU of 5lij by Molmil
polyalanine chain built in bacteriophage phi812K1-420 cement protein density map
分子名称: polyalanine chain built in bacteriophage phi812K1-420 cement protein density map
著者Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P.
登録日2016-07-14
公開日2017-07-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LII
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BU of 5lii by Molmil
bacteriophage phi812K1-420 major capsid protein
分子名称: Major capsid protein
著者Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P.
登録日2016-07-14
公開日2017-07-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
4BTQ
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BU of 4btq by Molmil
Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206
分子名称: MAJOR INNER PROTEIN P1
著者Nemecek, D, Boura, E, Wu, W, Cheng, N, Plevka, P, Qiao, J, Mindich, L, Heymann, J.B, Hurley, J.H, Steven, A.C.
登録日2013-06-18
公開日2013-12-11
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Subunit Folds and Maturation Pathway of a Dsrna Virus Capsid.
Structure, 21, 2013
5LK8
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BU of 5lk8 by Molmil
single particle reconstruction of slow bee paralysis virus empty particle
分子名称: VP1, VP2, VP3
著者Kalynych, S, Fuzik, T, Plevka, P.
登録日2016-07-21
公開日2017-01-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM study of slow bee paralysis virus at low pH reveals iflavirus genome release mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LWG
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BU of 5lwg by Molmil
Israeli acute paralysis virus heated to 63 degree - full particle
分子名称: VP1, VP2, VP3, ...
著者Mullapudi, E, Fuzik, T, Pridal, A, Plevka, P.
登録日2016-09-16
公開日2016-11-30
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-electron Microscopy Study of the Genome Release of the Dicistrovirus Israeli Acute Bee Paralysis Virus.
J. Virol., 91, 2017
5LWI
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BU of 5lwi by Molmil
Israeli acute paralysis virus heated to 63 degree - empty particle
分子名称: Structural polyprotein, VP1, VP2
著者Mullapudi, E, Fuzik, T, Pridal, A, Plevka, P.
登録日2016-09-16
公開日2016-11-30
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-electron Microscopy Study of the Genome Release of the Dicistrovirus Israeli Acute Bee Paralysis Virus.
J. Virol., 91, 2017
5LVC
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BU of 5lvc by Molmil
Aichi virus 1: empty particle
分子名称: VP0, VP1, VP3
著者Sabin, C, Fuzik, T, Skubnik, K, Palkova, L, Lindberg, A.M, Plevka, P.
登録日2016-09-13
公開日2016-12-14
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of Aichi Virus 1 and Its Empty Particle: Clues to Kobuvirus Genome Release Mechanism.
J.Virol., 90, 2016
5LI4
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BU of 5li4 by Molmil
bacteriophage phi812K1-420 tail sheath protein after contraction
分子名称: tail sheath protein
著者Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P.
登録日2016-07-14
公開日2017-07-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LI2
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BU of 5li2 by Molmil
bacteriophage phi812K1-420 tail sheath and tail tube protein in native tail
分子名称: Phage-like element PBSX protein XkdM, tail sheath protein
著者Novacek, J, Siborova, M, Benesik, M, Pantucek, R, Doskar, J, Plevka, P.
登録日2016-07-14
公開日2017-07-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LK7
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BU of 5lk7 by Molmil
Single particle reconstruction of slow bee paralysis virus virion at pH 5.5
分子名称: VP1, VP2, VP3
著者Kalynych, S, Fuzik, T, Plevka, P.
登録日2016-07-21
公開日2017-02-15
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM study of slow bee paralysis virus at low pH reveals iflavirus genome release mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5M48
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BU of 5m48 by Molmil
Coiled coil domain of Rtt103p
分子名称: Regulator of Ty1 transposition protein 103
著者Jasnovidova, O, Kalynych, S, Plevka, P, Stefl, R.
登録日2016-10-18
公開日2017-10-11
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.593 Å)
主引用文献Structure and dynamics of the RNAPII CTDsome with Rtt103.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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件を2024-08-07に公開中

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