Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 76 results

7ZRG
DownloadVisualize
BU of 7zrg by Molmil
Cryo-EM map of the WT KdpFABC complex in the E1_ATPearly conformation, under turnover conditions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CARDIOLIPIN, POTASSIUM ION, ...
Authors:Hielkema, L, Stock, C, Silberberg, J.M, Corey, R.A, Rheinberger, J, Wunnicke, D, Dubach, V.R.A, Stansfeld, P.J, Haenelt, I, Paulino, C.
Deposit date:2022-05-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Inhibited KdpFABC transitions into an E1 off-cycle state.
Elife, 11, 2022
8BMS
DownloadVisualize
BU of 8bms by Molmil
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMQ
DownloadVisualize
BU of 8bmq by Molmil
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to AMP-PNP
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMR
DownloadVisualize
BU of 8bmr by Molmil
Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMP
DownloadVisualize
BU of 8bmp by Molmil
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
6GCT
DownloadVisualize
BU of 6gct by Molmil
cryo-EM structure of the human neutral amino acid transporter ASCT2
Descriptor: GLUTAMINE, Neutral amino acid transporter B(0)
Authors:Garaeva, A.A, Oostergetel, G.T, Gati, C, Guskov, A, Paulino, C, Slotboom, D.J.
Deposit date:2018-04-19
Release date:2018-06-13
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Cryo-EM structure of the human neutral amino acid transporter ASCT2.
Nat. Struct. Mol. Biol., 25, 2018
6HRA
DownloadVisualize
BU of 6hra by Molmil
Cryo-EM structure of the KdpFABC complex in an E1 outward-facing state (state 1)
Descriptor: POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, Potassium-transporting ATPase KdpC subunit, ...
Authors:Stock, C, Hielkema, L, Tascon, I, Wunnicke, D, Oostergetel, G.T, Azkargorta, M, Paulino, C, Haenelt, I.
Deposit date:2018-09-26
Release date:2018-12-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structures of KdpFABC suggest a K+transport mechanism via two inter-subunit half-channels.
Nat Commun, 9, 2018
6HRB
DownloadVisualize
BU of 6hrb by Molmil
Cryo-EM structure of the KdpFABC complex in an E2 inward-facing state (state 2)
Descriptor: POTASSIUM ION, Potassium-transporting ATPase ATP-binding subunit, Potassium-transporting ATPase KdpC subunit, ...
Authors:Stock, C, Hielkema, L, Tascon, I, Wunnicke, D, Oostergetel, G.T, Azkargorta, M, Paulino, C, Haenelt, I.
Deposit date:2018-09-26
Release date:2018-12-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structures of KdpFABC suggest a K+transport mechanism via two inter-subunit half-channels.
Nat Commun, 9, 2018
8ON7
DownloadVisualize
BU of 8on7 by Molmil
FMRFa-bound Malacoceros FaNaC1 in lipid nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FMRFamide, ...
Authors:Kalienkova, V, Dandamudi, M, Paulino, C, Lynagh, T.
Deposit date:2023-04-01
Release date:2024-02-14
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis for excitatory neuropeptide signaling.
Nat.Struct.Mol.Biol., 31, 2024
8ON8
DownloadVisualize
BU of 8on8 by Molmil
Apo Malacoceros FaNaC1 in lipid nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FMRFamide-gated sodium channel 1
Authors:Kalienkova, V, Dandamudi, M, Paulino, C, Lynagh, T.
Deposit date:2023-04-01
Release date:2024-02-14
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for excitatory neuropeptide signaling.
Nat.Struct.Mol.Biol., 31, 2024
8ON9
DownloadVisualize
BU of 8on9 by Molmil
ASSFVRIa-bound Malacoceros FaNaC1 in lipid nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASSFVRIamide, ...
Authors:Kalienkova, V, Dandamudi, M, Paulino, C, Lynagh, T.
Deposit date:2023-04-01
Release date:2024-02-14
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structural basis for excitatory neuropeptide signaling.
Nat.Struct.Mol.Biol., 31, 2024
8ONA
DownloadVisualize
BU of 8ona by Molmil
FMRFa-bound Malacoceros FaNaC1 in lipid nanodiscs in presence of diminazene
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FMRFamide, neuropeptide, ...
Authors:Kalienkova, V, Dandamudi, M, Paulino, C, Lynagh, T.
Deposit date:2023-04-01
Release date:2024-02-14
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for excitatory neuropeptide signaling.
Nat.Struct.Mol.Biol., 31, 2024
8PD8
DownloadVisualize
BU of 8pd8 by Molmil
cAMP-bound SpSLC9C1 in lipid nanodiscs, dimer
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-12
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD3
DownloadVisualize
BU of 8pd3 by Molmil
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 2
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD7
DownloadVisualize
BU of 8pd7 by Molmil
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 4
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PCZ
DownloadVisualize
BU of 8pcz by Molmil
Ligand-free SpSLC9C1 in lipid nanodiscs, dimer
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD2
DownloadVisualize
BU of 8pd2 by Molmil
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 1
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD5
DownloadVisualize
BU of 8pd5 by Molmil
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 3
Descriptor: Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-11
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PD9
DownloadVisualize
BU of 8pd9 by Molmil
cAMP-bound SpSLC9C1 in lipid nanodiscs, protomer state 1
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-12
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PDV
DownloadVisualize
BU of 8pdv by Molmil
cGMP-bound SpSLC9C1 in lipid nanodiscs, protomer
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-12
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
8PDU
DownloadVisualize
BU of 8pdu by Molmil
cGMP-bound SpSLC9C1 in lipid nanodiscs, dimer
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, Sperm-specific sodium proton exchanger
Authors:Kalienkova, V, Peter, M, Rheinberger, J, Paulino, C.
Deposit date:2023-06-12
Release date:2023-11-08
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structures of a sperm-specific solute carrier gated by voltage and cAMP.
Nature, 623, 2023
7AHD
DownloadVisualize
BU of 7ahd by Molmil
OpuA (E190Q) occluded
Descriptor: ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7AHH
DownloadVisualize
BU of 7ahh by Molmil
OpuA inhibited inward-facing, SBD docked
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component, ...
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7AHE
DownloadVisualize
BU of 7ahe by Molmil
OpuA inhibited inward facing
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020
7AHC
DownloadVisualize
BU of 7ahc by Molmil
OpuA apo inward-facing
Descriptor: ABC transporter permease subunit, ABC-type proline/glycine betaine transport system ATPase component
Authors:Sikkema, H.R, Rheinberger, J, Paulino, C, Poolman, B.
Deposit date:2020-09-24
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.
Sci Adv, 6, 2020

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon