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PDB: 45955 件

1QKJ
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T4 Phage B-Glucosyltransferase, Substrate Binding and Proposed Catalytic Mechanism
分子名称: BETA-GLUCOSYLTRANSFERASE, URIDINE-5'-DIPHOSPHATE
著者Morera, S, Imberty, I, Aschke-Sonnenborn, U, Ruger, W, Freemont, P.S.
登録日1999-07-22
公開日1999-07-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献T4 Phage Beta-Glucosyltransferase: Substrate Binding and Proposed Catalytic Mechanism
J.Mol.Biol., 292, 1999
4PHG
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BU of 4phg by Molmil
Crystal structure of Ypt7 covalently modified with GTP
分子名称: GTP-binding protein YPT7, MAGNESIUM ION, N-[3-(propanoylamino)propyl]guanosine 5'-(tetrahydrogen triphosphate), ...
著者Koch, D, Wiegandt, D, Vieweg, S, Hofmann, F, Wu, Y, Itzen, A, Mueller, M.P, Goody, R.S.
登録日2014-05-06
公開日2014-05-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Locking GTPases covalently in their functional states.
Nat Commun, 6, 2015
2XO1
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BU of 2xo1 by Molmil
xpt-pbuX C74U Riboswitch from B. subtilis bound to N6-methyladenine
分子名称: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
著者Daldrop, P, Reyes, F.E, Robinson, D.A, Hammond, C.M, Lilley, D.M.J, Batey, R.T, Brenk, R.
登録日2010-08-09
公開日2011-04-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Novel ligands for a purine riboswitch discovered by RNA-ligand docking.
Chem. Biol., 18, 2011
7UC3
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BU of 7uc3 by Molmil
Intramolecular ester bond-containing repeat domain from G. bergeri adhesin
分子名称: Adhesin, MAGNESIUM ION
著者Wardega, J.K, Squire, C.J, Young, P.G.
登録日2022-03-15
公開日2023-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.442 Å)
主引用文献Intramolecular ester bond-containing repeat domain from G. bergeri adhesin
To Be Published
4GM5
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BU of 4gm5 by Molmil
Carboxypeptidase T with Sulphamoil Arginine
分子名称: CALCIUM ION, Carboxypeptidase T, GLYCEROL, ...
著者Kuznetsov, S.A, Timofeev, V.I, Akparov, V.K, Kuranova, I.P.
登録日2012-08-15
公開日2013-08-21
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Carboxypeptidase T with Sulphamoil Arginine
To be Published
2BCW
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BU of 2bcw by Molmil
Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-em map of an Escherichia coli 70S*EF-G*GDP*fusidic acid complex
分子名称: 50S ribosomal protein L11, 50S ribosomal protein L7/L12, Elongation factor G
著者Datta, P.P, Sharma, M.R, Qi, L, Frank, J, Agrawal, R.K.
登録日2005-10-19
公開日2005-12-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (11.2 Å)
主引用文献Interaction of the G' Domain of Elongation Factor G and the C-Terminal Domain of Ribosomal Protein L7/L12 during Translocation as Revealed by Cryo-EM.
Mol.Cell, 20, 2005
2O1Z
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BU of 2o1z by Molmil
Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)
分子名称: FE (III) ION, Ribonucleotide Reductase Subunit R2, UNKNOWN ATOM OR ION
著者Dong, A, Tempel, W, Qiu, W, Lew, J, Wernimont, A.K, Lin, Y.H, Hassanali, A, Melone, M, Zhao, Y, Nordlund, P, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Artz, J.D, Amani, M, Structural Genomics Consortium (SGC)
登録日2006-11-29
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)
To be Published
4PBT
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BU of 4pbt by Molmil
Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-trans-cyclooctene-amidopheylalanine (Tco-amF)
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 4-{[(1R,4E)-cyclooct-4-en-1-ylcarbonyl]amino}-L-phenylalanine, GLYCEROL, ...
著者Cooley, R.B, Karplus, P.A, Mehl, R.A.
登録日2014-04-13
公開日2014-07-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Gleaning Unexpected Fruits from Hard-Won Synthetases: Probing Principles of Permissivity in Non-canonical Amino Acid-tRNA Synthetases.
Chembiochem, 15, 2014
4PCR
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BU of 4pcr by Molmil
Crystal structure of Canavalia brasiliensis seed lectin (ConBr) complexed with Gamma-Aminobutyric Acid (GABA)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Concanavalin-Br, ...
著者Delatorre, P, Rocha, B.A.M, Silva-Filho, J.C, Teixeira, C.S, Cavada, B.S, Nascimento, K.S, Nbrega, R.B, Nagano, C.S, Sampaio, A.H, Leal, R.B, Neto, I.L.B.
登録日2014-04-16
公開日2015-04-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of Canavalia brasiliensis seed lectin (ConBr) complexed with Gamma-Aminobutyric Acid (GABA)
To Be Published
1NPO
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BU of 1npo by Molmil
BOVINE NEUROPHYSIN II COMPLEX WITH OXYTOCIN
分子名称: NEUROPHYSIN II, OXYTOCIN
著者Rose, J.P, Wang, B.-C.
登録日1996-02-01
公開日1997-02-12
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the neurophysin-oxytocin complex.
Nat.Struct.Biol., 3, 1996
4FU3
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BU of 4fu3 by Molmil
CID of human RPRD1B
分子名称: CHLORIDE ION, Regulation of nuclear pre-mRNA domain-containing protein 1B, UNKNOWN ATOM OR ION
著者Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
登録日2012-06-28
公開日2012-08-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献CID of human RPRD1B
TO BE PUBLISHED
2F1K
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BU of 2f1k by Molmil
Crystal structure of Synechocystis arogenate dehydrogenase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, prephenate dehydrogenase
著者Legrand, P, Dumas, R, Seux, M, Rippert, P, Ravelli, R, Ferrer, J.-L, Matringe, M.
登録日2005-11-14
公開日2006-05-09
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Biochemical Characterization and Crystal Structure of Synechocystis Arogenate Dehydrogenase Provide Insights into Catalytic Reaction
Structure, 14, 2006
1OJ6
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BU of 1oj6 by Molmil
Human brain neuroglobin three-dimensional structure
分子名称: Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Pesce, A, Dewilde, S, Nardini, M, Moens, L, Ascenzi, P, Hankeln, T, Burmester, T, Bolognesi, M.
登録日2003-07-03
公開日2003-09-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Human Brain Neuroglobin Structure Reveals a Distinct Mode of Controlling Oxygen Affinity
Structure, 11, 2003
2BDG
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BU of 2bdg by Molmil
Human Kallikrein 4 complex with nickel and p-aminobenzamidine
分子名称: CHLORIDE ION, Kallikrein-4, NICKEL (II) ION, ...
著者Debela, M, Bode, W, Goettig, P, Structural Proteomics in Europe (SPINE)
登録日2005-10-20
公開日2006-10-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures of human tissue kallikrein 4: activity modulation by a specific zinc binding site.
J.Mol.Biol., 362, 2006
2Y6M
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BU of 2y6m by Molmil
Crystal structure of EphA4 kinase domain
分子名称: EPHRIN TYPE-A RECEPTOR 4, GLYCEROL
著者Farenc, C.J.A, Celie, P.H.N, Siegal, G.
登録日2011-01-25
公開日2011-11-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Epha4 Protein Tyrosine Kinase Domain in the Apo- and Dasatinib-Bound State.
FEBS Lett., 585, 2011
1Q9K
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BU of 1q9k by Molmil
S25-2 Fab Unliganded 1
分子名称: MAGNESIUM ION, S25-2 Fab (IgG1k) heavy chain, S25-2 Fab (IgG1k) light chain
著者Nguyen, H.P, Seto, N.O, MacKenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
登録日2003-08-25
公開日2004-01-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
2YAA
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BU of 2yaa by Molmil
Crystal structure of the autoinhibited form of mouse DAPK2 in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DEATH-ASSOCIATED PROTEIN KINASE 2, ...
著者Patel, A.K, Kursula, P.
登録日2011-02-18
公開日2011-04-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Dimeric Autoinhibited Conformation of Dapk2, a Pro-Apoptotic Protein Kinase.
J.Mol.Biol., 409, 2011
7BHS
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BU of 7bhs by Molmil
Crystal structure of MAT2a with quinazoline fragment 2 bound in the allosteric site
分子名称: 6-chloranyl-2-methoxy-4-phenyl-quinazoline, S-ADENOSYLMETHIONINE, S-adenosylmethionine synthase isoform type-2
著者Schimpl, M, De Fusco, C, Borjesson, U, Cheung, T, Collie, I, Evans, L, Narasimhan, P, Stubbs, C, Vazquez-Chantada, M, Wagner, D.J, Grondine, M, Tentarelli, S, Underwood, E, Argyrou, A, Bagal, S, Chiarparin, E, Robb, G, Scott, J.S.
登録日2021-01-11
公開日2021-04-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Fragment-Based Design of a Potent MAT2a Inhibitor and in Vivo Evaluation in an MTAP Null Xenograft Model.
J.Med.Chem., 64, 2021
4N2C
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BU of 4n2c by Molmil
Crystal structure of Protein Arginine Deiminase 2 (F221/222A, 10 mM Ca2+)
分子名称: CALCIUM ION, Protein-arginine deiminase type-2
著者Slade, D.J, Zhang, X, Fang, P, Dreyton, C.J, Zhang, Y, Gross, M.L, Guo, M, Coonrod, S.A, Thompson, P.R.
登録日2013-10-04
公開日2015-02-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.022 Å)
主引用文献Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design.
Acs Chem.Biol., 10, 2015
1QC0
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BU of 1qc0 by Molmil
CRYSTAL STRUCTURE OF A 19 BASE PAIR COPY CONTROL RELATED RNA DUPLEX
分子名称: 5'-R(*GP*CP*AP*CP*CP*GP*CP*UP*AP*CP*CP*AP*AP*CP*GP*GP*UP*GP*C)-3', 5'-R(*GP*CP*AP*CP*CP*GP*UP*UP*GP*GP*UP*AP*GP*CP*GP*GP*UP*GP*C)-3', 5'-R(*UP*AP*GP*CP*GP*GP*UP*GP*C)-3', ...
著者Klosterman, P.S, Shah, S.A, Steitz, T.A.
登録日1999-05-17
公開日1999-11-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structures of two plasmid copy control related RNA duplexes: An 18 base pair duplex at 1.20 A resolution and a 19 base pair duplex at 1.55 A resolution.
Biochemistry, 38, 1999
7UI8
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BU of 7ui8 by Molmil
Intramolecular ester bond-containing repeat domain from E. columbae adhesin (split and religated)
分子名称: GLY-ASP-THR-LYS-HIS-GLU-VAL-ARG-HIS-GLU-ASN-PRO-GLN-ASP-GLU-ALA-GLN-THR-ILE-VAL-VAL-ASN-LYS, Split ester bond-containing adhesin repeat domain
著者Wardega, J.K, Squire, C.J, Young, P.G.
登録日2022-03-28
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.373 Å)
主引用文献Intramolecular ester bond-containing repeat domain from E. columbae adhesin (split and religated)
To Be Published
4G0L
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BU of 4g0l by Molmil
Glutathionyl-hydroquinone Reductase, YqjG, of E.coli complexed with GSH
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE, SULFATE ION, ...
著者Green, A.R, Hayes, R.P, Xun, L, Kang, C.
登録日2012-07-09
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structural understanding of the glutathione-dependent reduction mechanism of glutathionyl-hydroquinone reductases.
J.Biol.Chem., 287, 2012
3TBS
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BU of 3tbs by Molmil
CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX THE WITH LCMV-DERIVED GP33 ALTERED PEPTIDE ligand (V3P,Y4A)
分子名称: Beta-2-microglobulin, GLYCEROL, GLYCOPROTEIN G1, ...
著者Duru, A.D, Allerbring, E.B, Uchtenhagen, H, Mazumdar, P.A, Badia-Martinez, D, Madhurantakam, C, Sandalova, T, Nygren, P, Achour, A.
登録日2011-08-08
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Conversion of a T cell viral antagonist into an agonist through higher stabilization and conserved molecular mimicry: Implications for TCR recognition
To be Published
1YCR
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BU of 1ycr by Molmil
MDM2 BOUND TO THE TRANSACTIVATION DOMAIN OF P53
分子名称: MDM2, P53
著者Kussie, P.H, Pavletich, N.P.
登録日1996-09-30
公開日1997-11-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain.
Science, 274, 1996
2BYS
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BU of 2bys by Molmil
CRYSTAL STRUCTURE OF ACHBP FROM APLYSIA CALIFORNICA IN complex with lobeline
分子名称: ACETYLCHOLINE-BINDING PROTEIN, LOBELINE
著者Hansen, S.B, Sulzenbacher, G, Huxford, T, Marchot, P, Taylor, P, Bourne, Y.
登録日2005-08-04
公開日2005-10-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structures of Aplysia Achbp Complexes with Nicotinic Agonists and Antagonists Reveal Distinctive Binding Interfaces and Conformations.
Embo J., 24, 2005

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