6A9E
| Crystal structure of the N-terminal domain of Atg2 | Descriptor: | Endolysin,Autophagy-related protein 2 | Authors: | Osawa, T, Noda, N.N. | Deposit date: | 2018-07-13 | Release date: | 2019-03-20 | Last modified: | 2019-04-17 | Method: | X-RAY DIFFRACTION (3.205 Å) | Cite: | Atg2 mediates direct lipid transfer between membranes for autophagosome formation. Nat. Struct. Mol. Biol., 26, 2019
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6A9J
| Crystal structure of the PE-bound N-terminal domain of Atg2 | Descriptor: | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Endolysin,Autophagy-related protein 2 | Authors: | Osawa, T, Noda, N.N. | Deposit date: | 2018-07-13 | Release date: | 2019-03-20 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Atg2 mediates direct lipid transfer between membranes for autophagosome formation. Nat. Struct. Mol. Biol., 26, 2019
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8GZP
| Cryo-EM structure of the NS5-SLA complex | Descriptor: | GUANOSINE-5'-DIPHOSPHATE, Genome polyprotein, MAGNESIUM ION, ... | Authors: | Osawa, T, Ehara, H, Sekine, S. | Deposit date: | 2022-09-27 | Release date: | 2023-08-02 | Last modified: | 2023-08-23 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Structures of dengue virus RNA replicase complexes. Mol.Cell, 83, 2023
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8GZR
| Cryo-EM structure of the the NS5-NS3 RNA-elongation complex | Descriptor: | CYTIDINE-5'-DIPHOSPHATE, Genome polyprotein, MANGANESE (II) ION, ... | Authors: | Osawa, T, Ehara, H, Sekine, S. | Deposit date: | 2022-09-27 | Release date: | 2023-08-02 | Last modified: | 2023-08-23 | Method: | ELECTRON MICROSCOPY (2.8 Å) | Cite: | Structures of dengue virus RNA replicase complexes. Mol.Cell, 83, 2023
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8GZQ
| Cryo-EM structure of the NS5-NS3-SLA complex | Descriptor: | GUANOSINE-5'-DIPHOSPHATE, Genome polyprotein, RNA, ... | Authors: | Osawa, T, Ehara, H, Sekine, S. | Deposit date: | 2022-09-27 | Release date: | 2023-08-02 | Last modified: | 2023-08-23 | Method: | ELECTRON MICROSCOPY (3.9 Å) | Cite: | Structures of dengue virus RNA replicase complexes. Mol.Cell, 83, 2023
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3X1L
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2Z87
| Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP | Descriptor: | Chondroitin synthase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ... | Authors: | Osawa, T, Sugiura, N, Shimada, H, Hirooka, R, Tsuji, A, Kimura, M, Kimata, K, Kakuta, Y. | Deposit date: | 2007-09-03 | Release date: | 2008-09-16 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Crystal structure of chondroitin polymerase from Escherichia coli K4. Biochem. Biophys. Res. Commun., 378, 2009
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2Z86
| Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP | Descriptor: | Chondroitin synthase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ... | Authors: | Osawa, T, Sugiura, N, Shimada, H, Hirooka, R, Tsuji, A, Kimura, M, Kimata, K, Kakuta, Y. | Deposit date: | 2007-09-03 | Release date: | 2008-09-16 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of chondroitin polymerase from Escherichia coli K4. Biochem. Biophys. Res. Commun., 378, 2009
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4QTS
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4MNJ
| Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta | Descriptor: | ACETATE ION, Chitinase A | Authors: | Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T. | Deposit date: | 2013-09-11 | Release date: | 2014-10-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.58 Å) | Cite: | Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta To be Published
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4MNL
| Crystal Structure of GH18 Chitinase (G77W/E119Q mutant) from Cycas revoluta in complex with (GlcNAc)4 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Chitinase A | Authors: | Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T. | Deposit date: | 2013-09-11 | Release date: | 2014-10-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal Structure of GH18 Chitinase form Cycad, Cycas revoluta To be Published
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4MNM
| Crystal Structure of GH18 Chitinase (G77W/E119Q mutant) from Cycas revoluta in complex with (GlcNAc)4 | Descriptor: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A, ... | Authors: | Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T. | Deposit date: | 2013-09-11 | Release date: | 2014-09-17 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta To be Published
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4MNK
| Crystal Structure of GH18 Chitinase from Cycas revoluta in complex with (GlcNAc)3 | Descriptor: | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T. | Deposit date: | 2013-09-11 | Release date: | 2014-10-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.29 Å) | Cite: | Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta To be Published
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3WIJ
| Crystal structure of a plant class V chitinase mutant from Cycas revoluta in complex with (GlcNAc)3 | Descriptor: | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... | Authors: | Numata, T, Osawa, T, Umemoto, N, Ohnuma, T, Fukamizo, T. | Deposit date: | 2013-09-13 | Release date: | 2014-09-17 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Crystal structure of a plant class V chitinase mutant from Cycas revoluta in complex with (GlcNAc)3 To be Published
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3W2W
| Crystal structure of the Cmr2dHD-Cmr3 subcomplex bound to ATP | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cmr subunit Cmr2, CRISPR system Cmr subunit Cmr3, ... | Authors: | Numata, T, Osawa, T. | Deposit date: | 2012-12-06 | Release date: | 2013-10-16 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal Structure of the Cmr2-Cmr3 Subcomplex in the CRISPR-Cas RNA Silencing Effector Complex. J.Mol.Biol., 425, 2013
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3W2V
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3ALF
| Crystal Structure of Class V Chitinase from Nicotiana tobaccum | Descriptor: | 1,2-ETHANEDIOL, Chitinase, class V, ... | Authors: | Numata, T, Osawa, T, Ohnuma, T, Fukamizo, T. | Deposit date: | 2010-08-03 | Release date: | 2011-03-23 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum Plant Mol.Biol., 75, 2011
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3ALG
| Crystal Structure of Class V Chitinase (E115Q mutant) from Nicotiana tobaccum in complex with NAG4 | Descriptor: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, ... | Authors: | Numata, T, Osawa, T, Ohnuma, T, Fukamizo, T. | Deposit date: | 2010-08-03 | Release date: | 2011-03-23 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum Plant Mol.Biol., 75, 2011
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3AQU
| Crystal structure of a class V chitinase from Arabidopsis thaliana | Descriptor: | At4g19810, CITRATE ANION | Authors: | Numata, T, Ohnuma, T, Osawa, T, Fukamizo, T. | Deposit date: | 2010-11-19 | Release date: | 2011-07-20 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.01 Å) | Cite: | A class V chitinase from Arabidopsis thaliana: gene responses, enzymatic properties, and crystallographic analysis Planta, 234, 2011
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3AMU
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3AMT
| Crystal structure of the TiaS-tRNA(Ile2)-ATP complex | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Putative uncharacterized protein, RNA (78-MER) | Authors: | Numata, T, Osawa, T. | Deposit date: | 2010-08-23 | Release date: | 2011-10-12 | Last modified: | 2013-06-19 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural basis of tRNA agmatinylation essential for AUA codon decoding Nat.Struct.Mol.Biol., 18, 2011
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3AU7
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2Z7C
| Crystal structure of chromatin protein alba from hyperthermophilic archaeon pyrococcus horikoshii | Descriptor: | ARGININE, DNA/RNA-binding protein Alba | Authors: | Hada, K, Nakashima, T, Osawa, T, Shimada, H, Kakuta, Y, Kimura, M. | Deposit date: | 2007-08-17 | Release date: | 2008-08-05 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci.Biotechnol.Biochem., 72, 2008
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2ZXI
| Structure of Aquifex aeolicus GidA in the form II crystal | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG | Authors: | Numata, T, Osawa, T. | Deposit date: | 2008-12-24 | Release date: | 2009-05-19 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon Structure, 17, 2009
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2ZXH
| Structure of Aquifex aeolicus GidA in the form I crystal | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG | Authors: | Numata, T, Osawa, T. | Deposit date: | 2008-12-24 | Release date: | 2009-05-19 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon Structure, 17, 2009
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