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PDB: 191 results

1IVX
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Crystal structure of copper amine oxidase from Arthrobacter globiformis: Holo form generated by biogenesis in crystal.
Descriptor: COPPER (II) ION, amine oxidase
Authors:Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H.
Deposit date:2002-03-29
Release date:2002-08-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase.
Nat.Struct.Biol., 9, 2002
2D1W
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BU of 2d1w by Molmil
Substrate Schiff-Base intermediate with tyramine in copper amine oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Kuroda, S, Nakamoto, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
Deposit date:2005-09-01
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Quantum mechanical hydrogen tunneling in bacterial copper amine oxidase reaction
Biochem.Biophys.Res.Commun., 342, 2006
2ZWM
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BU of 2zwm by Molmil
Crystal structure of YycF receiver domain from Bacillus subtilis
Descriptor: SULFATE ION, Transcriptional regulatory protein yycF
Authors:Doi, A, Okajima, T, Utsumi, R.
Deposit date:2008-12-16
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Novel Antibiotics Target Protein of Gram-positive Pathogens: X-ray Crystal Structures and Search of Potential Drug-Binding sites
To be Published
2CWU
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Substrate schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWT
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Catalytic base deletion in copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2E2T
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with phenylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2U
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with 4-hydroxybenzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2CWV
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Product schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2E2V
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BU of 2e2v by Molmil
Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with benzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
1UI7
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BU of 1ui7 by Molmil
Site-directed mutagenesis of His433 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
Deposit date:2003-07-15
Release date:2004-04-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
1UI8
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BU of 1ui8 by Molmil
Site-directed mutagenesis of His592 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
Deposit date:2003-07-15
Release date:2004-04-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
2E3A
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BU of 2e3a by Molmil
Crystal structure of the NO-bound form of Arthromyces ramosus peroxidase at 1.3 Angstroms resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NITRIC OXIDE, ...
Authors:Fukuyama, K, Okada, T.
Deposit date:2006-11-22
Release date:2007-03-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of cyanide, nitric oxide and hydroxylamine complexes of Arthromyces ramosusperoxidase at 100 K refined to 1.3 A resolution: coordination geometries of the ligands to the haem iron
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2E39
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BU of 2e39 by Molmil
Crystal structure of the CN-bound form of Arthromyces ramosus peroxidase at 1.3 Angstroms resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CYANIDE ION, ...
Authors:Fukuyama, K, Okada, T.
Deposit date:2006-11-22
Release date:2007-03-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of cyanide, nitric oxide and hydroxylamine complexes of Arthromyces ramosusperoxidase at 100 K refined to 1.3 A resolution: coordination geometries of the ligands to the haem iron
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2E3B
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BU of 2e3b by Molmil
Crystal structure of the HA-bound form of Arthromyces ramosus peroxidase at 1.3 Angstroms resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HYDROXYAMINE, ...
Authors:Fukuyama, K, Okada, T.
Deposit date:2006-11-22
Release date:2007-03-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of cyanide, nitric oxide and hydroxylamine complexes of Arthromyces ramosusperoxidase at 100 K refined to 1.3 A resolution: coordination geometries of the ligands to the haem iron
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2G87
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BU of 2g87 by Molmil
Crystallographic model of bathorhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEPTANE-1,2,3-TRIOL, MERCURY (II) ION, ...
Authors:Nakamichi, H, Okada, T.
Deposit date:2006-03-02
Release date:2006-09-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystallographic analysis of primary visual photochemistry
Angew.Chem.Int.Ed.Engl., 45, 2006
2HPY
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BU of 2hpy by Molmil
Crystallographic model of lumirhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEPTANE-1,2,3-TRIOL, MERCURY (II) ION, ...
Authors:Nakamichi, H, Okada, T.
Deposit date:2006-07-18
Release date:2006-08-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Local peptide movement in the photoreaction intermediate of rhodopsin
Proc.Natl.Acad.Sci.Usa, 103, 2006

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