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PDB: 32 件
8I5K
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Crystal structure of chitin oligosaccharide binding protein from Vibrio cholera in complex with chitotriose.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ABC transporter substrate-binding protein, MAGNESIUM ION
著者Ohnuma, T, Takeshita, D.
登録日2023-01-25
公開日2024-01-03
実験手法X-RAY DIFFRACTION (1.219 Å)
主引用文献Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation.
Sci Rep, 13, 2023
8I5J
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Crystal structure of chitin oligosaccharide binding protein from Vibrio cholera.
分子名称: ABC transporter substrate-binding protein, MAGNESIUM ION
著者Ohnuma, T, Takeshita, D.
登録日2023-01-25
公開日2024-01-03
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation.
Sci Rep, 13, 2023
7F88
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Crystal structure of GH19 chitinase lacking the third loop structure
分子名称: Chitinase A
著者Ohnuma, T, Numata, T.
登録日2021-07-01
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A conserved loop structure of GH19 chitinases assists the enzyme function from behind the core-functional region.
Glycobiology, 32, 2022
5YLG
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Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
分子名称: 1,2-ETHANEDIOL, Chitinase A, ZINC ION
著者Ohnuma, T, Kitaoku, Y, Umemoto, N, Numata, T, Fukamizo, T.
登録日2017-10-17
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To Be Published
4PXV
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BU of 4pxv by Molmil
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
分子名称: Chitinase A, ZINC ION
著者Ohnuma, T, Umemoto, N, Numata, T, Fukamizo, T.
登録日2014-03-25
公開日2015-03-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To be Published
4R5E
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BU of 4r5e by Molmil
Crystal Structure of Family GH18 Chitinase from Cycas revoluta a Complex with Allosamidin
分子名称: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ACETATE ION, ALLOSAMIZOLINE, ...
著者Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
登録日2014-08-21
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structures and inhibitor binding properties of plant class V chitinases: the cycad enzyme exhibits unique structural and functional features.
Plant J., 82, 2015
4IJ4
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Crystal Structure of a Family GH19 chitinase from Bryum coronatum in complex with (GlcNAc)4
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
著者Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
登録日2012-12-21
公開日2014-03-26
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center.
Biochim.Biophys.Acta, 1844, 2014
4RL3
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Crystal Structure of the Catalytic Domain of a family GH18 Chitinase from fern, Peteris ryukyuensis
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Chitinase A, ...
著者Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
登録日2014-10-15
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献A class III chitinase without disulfide bonds from the fern, Pteris ryukyuensis: crystal structure and ligand-binding studies.
Planta, 242, 2015
4J0L
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Crystal Structure of a Family GH19 Chitinase (W72A/E67Q mutant) from rye seeds in complex with two (GlcNAc)4 molecules
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic endochitinase C, ...
著者Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
登録日2013-01-31
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Complete subsite mapping of a "loopful" GH19 chitinase from rye seeds based on its crystal structure
Febs Lett., 587, 2013
6JMS
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CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
分子名称: 1,2-ETHANEDIOL, Pollen allergen CJP38
著者Takashima, T, Numata, T, Fukamizo, T, Ohnuma, T.
登録日2019-03-13
公開日2020-05-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
To Be Published
5H7T
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BU of 5h7t by Molmil
A GH19 chitinase domain from the Cryptomeria japnonica pollen (CJP-4) allergen
分子名称: Class IV chitinase
著者Takashima, T, Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
登録日2016-11-21
公開日2017-11-22
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Crystal structure of GH19 catalytic domain of CJP-4 allergen from Japanese cedar (Cryptomeria japonica) pollen.
To Be Published
5K2L
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BU of 5k2l by Molmil
Crystal structure of LysM domain from Volvox carteri chitinase
分子名称: 1,2-ETHANEDIOL, Chitinase, lysozyme
著者Kitaoku, Y, Numata, T, Fukamizo, T, Ohnuma, T.
登録日2016-05-19
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Chitin oligosaccharide binding to the lysin motif of a novel type of chitinase from the multicellular green alga, Volvox carteri.
Plant Mol. Biol., 93, 2017
3WH1
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Crystal Structure of a Family GH19 Chitinase from Bryum coronatum in complex with (GlcNAc)4 at 1.0 A resolution
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
著者Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
登録日2013-08-21
公開日2014-03-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal structure of a "loopless" GH19 chitinase in complex with chitin tetrasaccharide spanning the catalytic center.
Biochim.Biophys.Acta, 1844, 2014
3WIJ
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BU of 3wij by Molmil
Crystal structure of a plant class V chitinase mutant from Cycas revoluta in complex with (GlcNAc)3
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Numata, T, Osawa, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
登録日2013-09-13
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of a plant class V chitinase mutant from Cycas revoluta in complex with (GlcNAc)3
To be Published
4DWX
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BU of 4dwx by Molmil
Crystal Structure of a Family GH-19 Chitinase from rye seeds
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Basic endochitinase C, SULFATE ION, ...
著者Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
登録日2012-02-27
公開日2012-08-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and chitin oligosaccharide-binding mode of a 'loopful' family GH19 chitinase from rye, Secale cereale, seeds
Febs J., 279, 2012
4DYG
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BU of 4dyg by Molmil
Crystal Structure of a Family GH-19 Chitinase from rye seeds in complex with (GlcNAc)4
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic endochitinase C, ...
著者Numata, T, Umemoto, N, Ohnuma, T, Fukamizo, T.
登録日2012-02-29
公開日2012-08-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure and chitin oligosaccharide-binding mode of a 'loopful' family GH19 chitinase from rye, Secale cereale, seeds
Febs J., 279, 2012
5YZ6
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BU of 5yz6 by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
分子名称: Chitinase, lysozyme
著者Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
登録日2017-12-13
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
5YZK
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BU of 5yzk by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
分子名称: Chitinase, lysozyme
著者Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
登録日2017-12-15
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
4HP0
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Crystal Structure of Hen Egg White Lysozyme in complex with GN3-M
分子名称: 1-DEOXYNOJIRIMYCIN, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme C
著者Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
登録日2012-10-23
公開日2013-01-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献A novel transition-state analogue for lysozyme, 4-O-beta-tri-N-acetylchitotriosyl moranoline, provided evidence supporting the covalent glycosyl-enzyme intermediate.
J.Biol.Chem., 288, 2013
4HPI
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BU of 4hpi by Molmil
Crystal Structure of Hen Egg White Lysozyme complex with GN2-M
分子名称: 1-DEOXYNOJIRIMYCIN, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme C
著者Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
登録日2012-10-23
公開日2013-01-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献A novel transition-state analogue for lysozyme, 4-O-beta-tri-N-acetylchitotriosyl moranoline, provided evidence supporting the covalent glycosyl-enzyme intermediate.
J.Biol.Chem., 288, 2013
4MNJ
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Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
分子名称: ACETATE ION, Chitinase A
著者Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
登録日2013-09-11
公開日2014-10-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
To be Published
4MNL
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Crystal Structure of GH18 Chitinase (G77W/E119Q mutant) from Cycas revoluta in complex with (GlcNAc)4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Chitinase A
著者Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
登録日2013-09-11
公開日2014-10-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of GH18 Chitinase form Cycad, Cycas revoluta
To be Published
4MNK
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Crystal Structure of GH18 Chitinase from Cycas revoluta in complex with (GlcNAc)3
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
登録日2013-09-11
公開日2014-10-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
To be Published
4MNM
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Crystal Structure of GH18 Chitinase (G77W/E119Q mutant) from Cycas revoluta in complex with (GlcNAc)4
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A, ...
著者Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
登録日2013-09-11
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
To be Published
5BUM
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BU of 5bum by Molmil
Crystal Structure of LysM domain from Equisetum arvense chitinase A
分子名称: Chitinase A, SULFATE ION
著者Kitaoku, Y, Numata, T, Ohnuma, T, Taira, T, Fukamizo, T.
登録日2015-06-04
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure, mechanism, and phylogeny of LysM-chitinase conjugates specifically found in fern plants.
Plant Sci., 321, 2022

 

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