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PDB: 65 件

7F88
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Crystal structure of GH19 chitinase lacking the third loop structure
分子名称: Chitinase A
著者Ohnuma, T, Numata, T.
登録日2021-07-01
公開日2022-03-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A conserved loop structure of GH19 chitinases assists the enzyme function from behind the core-functional region.
Glycobiology, 32, 2022
6JMS
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CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
分子名称: 1,2-ETHANEDIOL, Pollen allergen CJP38
著者Takashima, T, Numata, T, Fukamizo, T, Ohnuma, T.
登録日2019-03-13
公開日2020-05-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
To Be Published
5BUM
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Crystal Structure of LysM domain from Equisetum arvense chitinase A
分子名称: Chitinase A, SULFATE ION
著者Kitaoku, Y, Numata, T, Ohnuma, T, Taira, T, Fukamizo, T.
登録日2015-06-04
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure, mechanism, and phylogeny of LysM-chitinase conjugates specifically found in fern plants.
Plant Sci., 321, 2022
4ZXE
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X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5.
分子名称: 1,2-ETHANEDIOL, Glucanase/Chitosanase, SULFATE ION
著者Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
登録日2015-05-20
公開日2016-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZY9
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X-ray crystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
分子名称: Glucanase/chitosanase
著者Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
登録日2015-05-21
公開日2016-04-13
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZZ5
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X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
分子名称: 1,2-ETHANEDIOL, Glucanase/chitosanase, SULFATE ION
著者Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
登録日2015-05-22
公開日2016-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZZ8
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X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5
分子名称: 1,2-ETHANEDIOL, 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, Glucanase/chitosanase, ...
著者Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
登録日2015-05-22
公開日2016-04-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
3X1L
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BU of 3x1l by Molmil
Crystal Structure of the CRISPR-Cas RNA Silencing Cmr Complex Bound to a Target Analog
分子名称: CRISPR system Cmr subunit Cmr2, CRISPR system Cmr subunit Cmr3, CRISPR system Cmr subunit Cmr5, ...
著者Osawa, T, Numata, T.
登録日2014-11-20
公開日2015-05-13
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog.
Mol.Cell, 58, 2015
1UAX
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Crystal structure of the ribonuclease H2 from Pyrococcus horikoshii OT3
分子名称: Ribonuclease HII
著者Hata, T, Numata, T, Kakuta, Y, Kimura, M.
登録日2003-03-24
公開日2004-06-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the ribonuclease H2 from Pyrococcus horikoshii OT3
To be published
2CZW
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Crystal structure analysis of protein component Ph1496p of P.horikoshii ribonuclease P
分子名称: 50S ribosomal protein L7Ae
著者Fukuhara, H, Kifusa, M, Watanabe, M, Terada, A, Honda, T, Numata, T, Kakuta, Y, Kimura, M.
登録日2005-07-19
公開日2006-04-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3
Biochem.Biophys.Res.Commun., 343, 2006
1UCD
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Crystal structure of Ribonuclease MC1 from bitter gourd seeds complexed with 5'-UMP
分子名称: Ribonuclease MC, URACIL, URIDINE-5'-MONOPHOSPHATE
著者Suzuki, A, Numata, T, Yao, M, Kimura, M, Tanaka, I.
登録日2003-04-10
公開日2004-05-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of RNase MC1 from bitter gourd seeds in complex with 5'UMP
To be published
1V9H
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BU of 1v9h by Molmil
Crystal structure of the RNase MC1 mutant Y101A in complex with 5'-UMP
分子名称: Ribonuclease MC, SULFATE ION, URIDINE-5'-MONOPHOSPHATE
著者Kimura, K, Numata, T, Kakuta, Y, Kimura, M.
登録日2004-01-26
公開日2004-10-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Amino acids conserved at the C-terminal half of the ribonuclease t2 family contribute to protein stability of the enzymes
Biosci.Biotechnol.Biochem., 68, 2004
1V77
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Crystal structure of the PH1877 protein
分子名称: hypothetical protein PH1877
著者Takagi, H, Numata, T, Kakuta, Y, Kimura, M.
登録日2003-12-12
公開日2004-08-31
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the ribonuclease P protein Ph1877p from hyperthermophilic archaeon Pyrococcus horikoshii OT3
Biochem.Biophys.Res.Commun., 319, 2004
1UCA
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BU of 1uca by Molmil
Crystal structure of the Ribonuclease MC1 from bitter gourd seeds complexed with 2'-UMP
分子名称: PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER, Ribonuclease MC
著者Suzuki, A, Yao, M, Tanaka, I, Numata, T, Kikukawa, S, Yamasaki, N, Kimura, M.
登録日2003-04-10
公開日2003-04-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structures of the ribonuclease MC1 from bitter gourd seeds, complexed with 2'-UMP or 3'-UMP, reveal structural basis for uridine specificity
Biochem.Biophys.Res.Commun., 275, 2000
1UCC
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BU of 1ucc by Molmil
Crystal structure of the Ribonuclease MC1 from bitter gourd seeds complexed with 3'-UMP.
分子名称: 3'-URIDINEMONOPHOSPHATE, Ribonuclease MC
著者Suzuki, A, Yao, M, Tanaka, I, Numata, T, Kikukawa, S, Yamasaki, N, Kimura, M.
登録日2003-04-10
公開日2003-04-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structures of the ribonuclease MC1 from bitter gourd seeds, complexed with 2'-UMP or 3'-UMP, reveal structural basis for uridine specificity
Biochem.Biophys.Res.Commun., 275, 2000
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