1GE5
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![BU of 1ge5 by Molmil](/molmil-images/mine/1ge5) | ZINC PEPTIDASE FROM GRIFOLA FRONDOSA | 分子名称: | PEPTIDYL-LYS METALLOENDOPEPTIDASE, ZINC ION, alpha-D-mannopyranose | 著者 | Hori, T, Kumasaka, T, Yamamoto, M, Nonaka, T, Tanaka, N, Hashimoto, Y, Ueki, T, Takio, K. | 登録日 | 2000-10-11 | 公開日 | 2001-03-14 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms. Acta Crystallogr.,Sect.D, 57, 2001
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1GE7
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![BU of 1ge7 by Molmil](/molmil-images/mine/1ge7) | ZINC PEPTIDASE FROM GRIFOLA FRONDOSA | 分子名称: | PEPTIDYL-LYS METALLOENDOPEPTIDASE, ZINC ION, alpha-D-mannopyranose | 著者 | Hori, T, Kumasaka, T, Yamamoto, M, Nonaka, T, Tanaka, N, Hashimoto, Y, Ueki, T, Takio, K. | 登録日 | 2000-10-11 | 公開日 | 2001-03-14 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms. Acta Crystallogr.,Sect.D, 57, 2001
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1WVV
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![BU of 1wvv by Molmil](/molmil-images/mine/1wvv) | |
3SSI
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![BU of 3ssi by Molmil](/molmil-images/mine/3ssi) | |
1ITX
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![BU of 1itx by Molmil](/molmil-images/mine/1itx) | Catalytic Domain of Chitinase A1 from Bacillus circulans WL-12 | 分子名称: | GLYCEROL, Glycosyl Hydrolase | 著者 | Iwahori, F, Matsumoto, T, Watanabe, T, Nonaka, T. | 登録日 | 2002-02-13 | 公開日 | 2002-03-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | 主引用文献 | Three-dimensional structure of the catalytic domain of chitinase A1 from Bacillus circulans WL-12 at a very high resolution PROC.JPN.ACAD.,SER.B, 75, 1999
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4Y06
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![BU of 4y06 by Molmil](/molmil-images/mine/4y06) | Crystal structure of the DAP BII (G675R) dipeptide complex | 分子名称: | Dipeptidyl aminopeptidase BII, GLUTAMIC ACID, GLYCEROL, ... | 著者 | Sakamoto, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2015-02-05 | 公開日 | 2015-07-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.18 Å) | 主引用文献 | Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity. Sci Rep, 5, 2015
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1AHI
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![BU of 1ahi by Molmil](/molmil-images/mine/1ahi) | 7 ALPHA-HYDROXYSTEROID DEHYDROGENASE COMPLEXED WITH NADH AND 7-OXO GLYCOCHENODEOXYCHOLIC ACID | 分子名称: | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 7 ALPHA-HYDROXYSTEROID DEHYDROGENASE, GLYCOCHENODEOXYCHOLIC ACID | 著者 | Tanaka, N, Nonaka, T, Mitsui, Y. | 登録日 | 1995-08-25 | 公開日 | 1996-10-14 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structures of the binary and ternary complexes of 7 alpha-hydroxysteroid dehydrogenase from Escherichia coli. Biochemistry, 35, 1996
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1AHH
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![BU of 1ahh by Molmil](/molmil-images/mine/1ahh) | |
5XEO
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![BU of 5xeo by Molmil](/molmil-images/mine/5xeo) | |
5XEN
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![BU of 5xen by Molmil](/molmil-images/mine/5xen) | |
4Y02
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![BU of 4y02 by Molmil](/molmil-images/mine/4y02) | Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Ground) | 分子名称: | GLYCEROL, POTASSIUM ION, Peptidase S46 | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2015-02-05 | 公開日 | 2015-07-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.96 Å) | 主引用文献 | Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity. Sci Rep, 5, 2015
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5B53
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![BU of 5b53 by Molmil](/molmil-images/mine/5b53) | |
1CYD
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![BU of 1cyd by Molmil](/molmil-images/mine/1cyd) | CARBONYL REDUCTASE COMPLEXED WITH NADPH AND 2-PROPANOL | 分子名称: | CARBONYL REDUCTASE, ISOPROPYL ALCOHOL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 著者 | Tanaka, N, Nonaka, T, Mitsui, Y. | 登録日 | 1995-09-01 | 公開日 | 1996-10-14 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of the ternary complex of mouse lung carbonyl reductase at 1.8 A resolution: the structural origin of coenzyme specificity in the short-chain dehydrogenase/reductase family. Structure, 4, 1996
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5Z5C
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![BU of 5z5c by Molmil](/molmil-images/mine/5z5c) | Crystal structure of hydrogen sulfide-producing enzyme (Fn1055) from Fusobacterium nucleatum: lysine-dimethylated form | 分子名称: | CHLORIDE ION, Cysteine synthase, PYRIDOXAL-5'-PHOSPHATE | 著者 | Kezuka, Y, Yoshida, Y, Nonaka, T. | 登録日 | 2018-01-17 | 公開日 | 2018-02-14 | 最終更新日 | 2018-03-07 | 実験手法 | X-RAY DIFFRACTION (2.07 Å) | 主引用文献 | Structural insights into the catalytic mechanism of cysteine (hydroxyl) lyase from the hydrogen sulfide-producing oral pathogen, Biochem. J., 475, 2018
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7DKD
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![BU of 7dkd by Molmil](/molmil-images/mine/7dkd) | Stenotrophomonas maltophilia DPP7 in complex with Asn-Tyr | 分子名称: | ASPARAGINE, Dipeptidyl-peptidase, GLYCEROL, ... | 著者 | Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2020-11-23 | 公開日 | 2021-11-03 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.92 Å) | 主引用文献 | Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
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7DKC
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![BU of 7dkc by Molmil](/molmil-images/mine/7dkc) | Stenotrophomonas maltophilia DPP7 in complex with Tyr-Tyr | 分子名称: | Dipeptidyl-peptidase, GLYCEROL, TYROSINE | 著者 | Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2020-11-23 | 公開日 | 2021-11-03 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.86 Å) | 主引用文献 | Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
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7DKB
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![BU of 7dkb by Molmil](/molmil-images/mine/7dkb) | Stenotrophomonas maltophilia DPP7 in complex with Val-Tyr | 分子名称: | Dipeptidyl-peptidase, TYROSINE, VALINE | 著者 | Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2020-11-23 | 公開日 | 2021-11-03 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | 主引用文献 | Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
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7DKE
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![BU of 7dke by Molmil](/molmil-images/mine/7dke) | Stenotrophomonas maltophilia DPP7 in complex with Phe-Tyr | 分子名称: | Dipeptidyl-peptidase, GLYCEROL, PHENYLALANINE, ... | 著者 | Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2020-11-23 | 公開日 | 2021-11-03 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.91 Å) | 主引用文献 | Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
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2DKV
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![BU of 2dkv by Molmil](/molmil-images/mine/2dkv) | Crystal structure of class I chitinase from Oryza sativa L. japonica | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, chitinase | 著者 | Kezuka, Y, Nishizawa, Y, Watanabe, T, Nonaka, T. | 登録日 | 2006-04-14 | 公開日 | 2007-05-01 | 最終更新日 | 2020-01-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of full-length class I chitinase from rice revealed by X-ray crystallography and small-angle X-ray scattering. Proteins, 78, 2010
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5YP4
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![BU of 5yp4 by Molmil](/molmil-images/mine/5yp4) | Crystal structure of dipeptidyl peptidase IV (DPP IV) with Lys-Pro from Pseudoxanthomonas mexicana WO24 | 分子名称: | Dipeptidyl aminopeptidase 4, GLYCEROL, LYSINE, ... | 著者 | Roppongi, S, Suzuki, Y, Tateoka, C, Fuimoto, M, Morisawa, S, Iizuka, I, Nakamura, A, Honma, N, Shida, Y, Ogasawara, W, Tanaka, N, Sakamoto, Y, Nonaka, T. | 登録日 | 2017-11-01 | 公開日 | 2018-02-21 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues. Sci Rep, 8, 2018
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6IOW
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![BU of 6iow by Molmil](/molmil-images/mine/6iow) | |
2DBT
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![BU of 2dbt by Molmil](/molmil-images/mine/2dbt) | |
6IOY
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![BU of 6ioy by Molmil](/molmil-images/mine/6ioy) | Crystal structure of Porphyromonas gingivalis acetate kinase | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, Acetate kinase, SULFATE ION | 著者 | Kezuka, Y, Yoshida, Y, Nonaka, T. | 登録日 | 2018-10-31 | 公開日 | 2019-04-24 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | 主引用文献 | Characterization of the phosphotransacetylase-acetate kinase pathway for ATP production inPorphyromonas gingivalis. J Oral Microbiol, 11, 2019
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6IOX
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![BU of 6iox by Molmil](/molmil-images/mine/6iox) | |
2DKC
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![BU of 2dkc by Molmil](/molmil-images/mine/2dkc) | Crystal structure of N-acetylglucosamine-phosphate mutase, a member of the alpha-D-phosphohexomutase superfamily, in the substrate complex | 分子名称: | 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, PHOSPHATE ION, Phosphoacetylglucosamine mutase, ... | 著者 | Nishitani, Y, Maruyama, D, Nonaka, T, Kita, A, Fukami, T.A, Mio, T, Yamada-Okabe, H, Yamada-Okabe, T, Miki, K. | 登録日 | 2006-04-07 | 公開日 | 2006-05-16 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal Structures of N-Acetylglucosamine-phosphate Mutase, a Member of the {alpha}-D-Phosphohexomutase Superfamily, and Its Substrate and Product Complexes. J.Biol.Chem., 281, 2006
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