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PDB: 23 件

8WD4
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BU of 8wd4 by Molmil
EGFR(L858R/T790/C797S) in complex with compound 5j
分子名称: CHLORIDE ION, Epidermal growth factor receptor, ~{N}-[3,3-bis(fluoranyl)propyl]-4-[[(2~{S})-butan-2-yl]amino]-6-[[2-(1-cyclopropylsulfonylpyrazol-4-yl)pyrimidin-4-yl]amino]pyridine-3-carboxamide
著者Nishikawa, Y.
登録日2023-09-14
公開日2023-12-20
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Synthesis, activity, and their relationships of 2,4-diaminonicotinamide derivatives as EGFR inhibitors targeting C797S mutation.
Bioorg.Med.Chem.Lett., 98, 2023
3WUQ
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BU of 3wuq by Molmil
Structure of the entire stalk region of the dynein motor domain
分子名称: Cytoplasmic dynein 1 heavy chain 1
著者Nishikawa, Y, Oyama, T, Kamiya, N, Kon, T, Toyoshima, Y.Y, Nakamura, H, Kurisu, G.
登録日2014-05-01
公開日2014-08-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the entire stalk region of the Dynein motor domain
J.Mol.Biol., 426, 2014
3J6P
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Pseudo-atomic model of dynein microtubule binding domain-tubulin complex based on a cryoEM map
分子名称: Dynein heavy chain, cytoplasmic, GUANOSINE-5'-DIPHOSPHATE, ...
著者Uchimura, S, Fujii, T, Takazaki, H, Ayukawa, R, Nishikawa, Y, Minoura, I, Hachikubo, Y, Kurisu, G, Sutoh, K, Kon, T, Namba, K, Muto, E.
登録日2014-03-20
公開日2014-12-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献A flipped ion pair at the dynein-microtubule interface is critical for dynein motility and ATPase activation
J.Cell Biol., 208, 2015
5H47
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BU of 5h47 by Molmil
Crystal structure of AOL complexed with 2-MeSe-Fuc
分子名称: Uncharacterized protein, methyl 6-deoxy-2-Se-methyl-2-seleno-alpha-L-galactopyranoside
著者Kato, R, Nishikawa, Y, Makyio, H.
登録日2016-10-31
公開日2017-01-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Synthesis of seleno-fucose compounds and their application to the X-ray structural determination of carbohydrate-lectin complexes using single/multi-wavelength anomalous dispersion phasing
Bioorg. Med. Chem., 25, 2017
5AYH
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BU of 5ayh by Molmil
Structure of the entire dynein stalk region
分子名称: Cytoplasmic dynein 1 heavy chain 1
著者Kurisu, G, Nishikawa, Y, Inatomi, M.
登録日2015-08-21
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.011 Å)
主引用文献Structural Change in the Dynein Stalk Region Associated with Two Different Affinities for the Microtubule
J.Mol.Biol., 428, 2016
5WSF
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BU of 5wsf by Molmil
Crystal structure of a cupin protein (tm1459) in osmium (Os)-substituted form II
分子名称: OSMIUM ION, Uncharacterized protein tm1459
著者Fujieda, N, Nakano, T, Taniguchi, Y, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2016-12-06
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase
J. Am. Chem. Soc., 2017
5WSD
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BU of 5wsd by Molmil
Crystal structure of a cupin protein (tm1459) in apo form
分子名称: Uncharacterized protein tm1459
著者Fujieda, N, Nakano, T, Taniguchi, Y, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2016-12-06
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase
J. Am. Chem. Soc., 2017
5WSE
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BU of 5wse by Molmil
Crystal structure of a cupin protein (tm1459) in osmium (Os) substituted form I
分子名称: OSMIUM ION, Uncharacterized protein tm1459
著者Fujieda, N, Nakano, T, Taniguchi, Y, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2016-12-06
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase
J. Am. Chem. Soc., 2017
6JUD
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BU of 6jud by Molmil
Radiation damage in Aspergillus oryzae pro-tyrosinase oxygen-bound C92A/H103F mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU6
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BU of 6ju6 by Molmil
Aspergillus oryzae active-tyrosinase copper-depleted C92A mutant
分子名称: NITRATE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JUC
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BU of 6juc by Molmil
Aspergillus oryzae pro-tyrosinase oxygen-bound C92A/H103F mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU5
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BU of 6ju5 by Molmil
Aspergillus oryzae pro-tyrosinase C92A/F513Y mutant
分子名称: COPPER (II) ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU8
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BU of 6ju8 by Molmil
Aspergillus oryzae active-tyrosinase copper-bound C92A mutant
分子名称: COPPER (II) ION, NITRATE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JUB
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BU of 6jub by Molmil
Radiation damage in Aspergillus oryzae pro-tyrosinase oxygen-bound C92A mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU9
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BU of 6ju9 by Molmil
Aspergillus oryzae active-tyrosinase copper-bound C92A mutant complexed with L-tyrosine
分子名称: 3,4-DIHYDROXYPHENYLALANINE, COPPER (II) ION, NITRATE ION, ...
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU7
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BU of 6ju7 by Molmil
Aspergillus oryzae active-tyrosinase copper-depleted C92A mutant complexed with L-tyrosine
分子名称: NITRATE ION, TYROSINE, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JUA
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BU of 6jua by Molmil
Aspergillus oryzae pro-tyrosinase oxygen-bound C92A mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU4
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BU of 6ju4 by Molmil
Aspergillus oryzae pro-tyrosinase F513Y mutant
分子名称: COPPER (II) ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L4P
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BU of 6l4p by Molmil
Crystal structure of the complex between the axonemal outer-arm dynein light chain-1 and microtubule binding domain of gamma heavy chain
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dynein light chain 1, axonemal, ...
著者Toda, A, Nishikawa, Y, Tanaka, H, Yagi, T, Kurisu, G.
登録日2019-10-19
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献The complex of outer-arm dynein light chain-1 and the microtubule-binding domain of the gamma heavy chain shows how axonemal dynein tunes ciliary beating.
J.Biol.Chem., 295, 2020
6L2F
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BU of 6l2f by Molmil
Crystal structure of a cupin protein (tm1459, H54AH58A mutant) in copper (Cu) substituted form
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, COPPER (II) ION, ...
著者Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-10-03
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L2D
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BU of 6l2d by Molmil
Crystal structure of a cupin protein (tm1459) in copper (Cu) substituted form
分子名称: COPPER (II) ION, Cupin_2 domain-containing protein
著者Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-10-03
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.198 Å)
主引用文献Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L2E
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BU of 6l2e by Molmil
Crystal structure of a cupin protein (tm1459, H52A mutant) in copper (Cu) substituted form
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Cupin_2 domain-containing protein
著者Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-10-03
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
5YXM
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BU of 5yxm by Molmil
Crystal structure of Chlamydomonas Outer Arm Dynein Light Chain 1
分子名称: Dynein light chain 1, axonemal, PHOSPHATE ION
著者Toda, A, Tanaka, H, Nishikawa, Y, Yagi, T, Kurisu, G.
登録日2017-12-06
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.545 Å)
主引用文献Structural atlas of dynein motors at atomic resolution.
Biophys Rev, 10, 2018

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件を2024-07-24に公開中

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