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PDB: 48 件

2PLF
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The structure of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the nucleotide-free form.
分子名称: Translation initiation factor 2 gamma subunit
著者Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V.
登録日2007-04-19
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA.
J.Mol.Biol., 373, 2007
4F9T
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BU of 4f9t by Molmil
Ribosomal protein L1 from Thermus thermophilus with substitution Thr217Ala
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 50S ribosomal protein L1, ...
著者Kljashtorny, V.G, Volchkov, S.A, Nikonova, E.Y, Kostareva, O.S, Tishchenko, S.V, Nevskaya, N.A, Nikonov, S.V.
登録日2012-05-21
公開日2012-08-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献[Crystal structures of mutant ribosomal proteins L1].
MOL.BIOL.(MOSCOW), 41, 2007
4RJL
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BU of 4rjl by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDPCP
分子名称: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, FORMIC ACID, MAGNESIUM ION, ...
著者Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2014-10-09
公開日2015-11-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6401 Å)
主引用文献Crystal structure of gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDPCP at 1.64A resolution
To be Published
3CW2
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BU of 3cw2 by Molmil
Crystal structure of the intact archaeal translation initiation factor 2 from Sulfolobus solfataricus .
分子名称: Translation initiation factor 2 subunit alpha, Translation initiation factor 2 subunit beta, Translation initiation factor 2 subunit gamma
著者Stolboushkina, E.A, Nikonov, S.V, Nikulin, A.D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, O.S.
登録日2008-04-21
公開日2009-01-06
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the intact archaeal translation initiation factor 2 demonstrates very high conformational flexibility in the alpha- and beta-subunits.
J.Mol.Biol., 382, 2008
5DSZ
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BU of 5dsz by Molmil
Gamma-subunit of the translation initiation factor 2 from S. solfataricus
分子名称: Translation initiation factor 2 subunit gamma
著者Kravchenko, O.V, Nikonov, O.S, Stolboushkina, E.A, Nevskaya, N.A, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2015-09-17
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gamma-subunit of the translation initiation factor 2 from S. solfataricus
To Be Published
2PMD
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BU of 2pmd by Molmil
The structures of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the GDP-bound form.
分子名称: GUANOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, PYROPHOSPHATE, ...
著者Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V.
登録日2007-04-21
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA.
J.Mol.Biol., 373, 2007
3QSY
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Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea
分子名称: METHIONINE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Translation initiation factor 2 subunit alpha, ...
著者Nikonov, O.S, Stolboushkina, E.A, Zelinskaya, N.V, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2011-02-22
公開日2012-03-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the archaeal translation initiation factor 2 in complex with a GTP analogue and Met-tRNAf(Met.)
J.Mol.Biol., 425, 2013
3I1F
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Gamma-subunit of the translation initiation factor 2 from S. solfataricus in complex with Gpp(CH2)p
分子名称: PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Translation initiation factor 2 subunit gamma
著者Stolboushkina, E.A, Nikonov, S.V, Nikulin, A.D, Blaesi, U, Garber, M.B, Nikonov, O.S.
登録日2009-06-26
公開日2010-06-30
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献5-prime-triphosphate end of mRNA recognizes the second GTP-binding site on the gamma-subunit of the archaeal translation initiation factor 2
To be Published
4M0L
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BU of 4m0l by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Lazopulo, A.M, Lazopulo, S.M, Garber, M.B, Nikonov, S.V.
登録日2013-08-01
公開日2013-08-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M2L
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BU of 4m2l by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in nucleotide-free form
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, SULFATE ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-08-05
公開日2014-03-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.149 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M53
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Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDPCP
分子名称: BETA-MERCAPTOETHANOL, FORMIC ACID, MAGNESIUM ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Lazopulo, A.M, Lazopulo, S.M, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-08-07
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M4S
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BU of 4m4s by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDP and formate ion mimic aIF2gamma*GDP*Pi complex (a formate ion substitutes for Pi)
分子名称: FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-08-07
公開日2014-03-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
3PEN
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BU of 3pen by Molmil
Structure of archaeal initiation factor aIF2gamma subunit delta 37-47 from Sulfolobus solfataricus in the GDP-bound form.
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
著者Arkhipova, V.I, Lazopulo, A.M, Lazopulo, S.M, Garber, M.B, Nikonov, O.S, Nikonov, S.V, Gabdoulkhakov, A.G.
登録日2010-10-27
公開日2011-05-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3005 Å)
主引用文献Structure of archaeal initiation factor aIF2gamma subunit from Sulfolobus solfataricus in the GDP-bound form.
TO BE PUBLISHED
3SJZ
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BU of 3sjz by Molmil
The structure of aIF2gamma subunit delta 41-45 from archaeon Sulfolobus solfataricus complexed with GDP and GDPNP
分子名称: BETA-MERCAPTOETHANOL, GUANOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Arkhipova, V.I, Lazopulo, S.M, Lazopulo, A.M, Nikonov, O.S, Stolboushkina, E.A, Gabdoulkhakov, A.G, Garber, M.B, Nikonov, S.V.
登録日2011-06-22
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献HOLD FOR PUBLICATION
To be Published
3QOY
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BU of 3qoy by Molmil
Crystal structure of ribosomal protein L1 from Aquifex aeolicus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 50S ribosomal protein L1, ACETIC ACID, ...
著者Gabdulkhakov, A.G, Tishchenko, S.V, Nikonova, E.U, Shkliaeva, A.A, Garber, M.B, Nikonov, S.V, Nevskaya, N.A.
登録日2011-02-11
公開日2011-12-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Ribosomal Protein L1 from the Bacterium Aquifex Aeolicus
Crystallography Reports, 56, 2011
4QFM
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BU of 4qfm by Molmil
The structure of aIF2gamma subunit D152A from archaeon Sulfolobus solfataricus complexed with GDPCP
分子名称: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2014-05-21
公開日2015-06-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The structure of aIF2gamma subunit D152A from archaeon Sulfolobus solfataricus complexed with GDPCP
To be Published
4NBS
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The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP
分子名称: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-10-23
公開日2014-10-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.305 Å)
主引用文献The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP
To be Published
4QHY
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The structure of aIF2gamma subunit H20F/D152A from archaeon Sulfolobus solfataricus complexed with GDPCP
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Translation initiation factor 2 subunit gamma
著者Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2014-05-30
公開日2015-06-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Binding mRNA on the archaeal translation initiation factor 2 gamma-subunit
To be Published
2RFV
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BU of 2rfv by Molmil
High resolution structure of L-methionine gamma-lyase from Citrobacter freundii
分子名称: CHLORIDE ION, Methionine gamma-lyase
著者Nikulin, A.D, Revtovich, S.V, Morozova, E.A, Nevskaya, N.A, Nikonov, S.V, Garber, M.B, Demidkina, T.V.
登録日2007-10-02
公開日2008-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.355 Å)
主引用文献High-resolution structure of methionine gamma-lyase from Citrobacter freundii.
Acta Crystallogr.,Sect.D, 64, 2008
4REO
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BU of 4reo by Molmil
Mutant ribosomal protein l1 from thermus thermophilus with threonine 217 replaced by valine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 50S ribosomal protein L1, GLYCINE, ...
著者Gabdulkhakov, A.G, Nevskaya, N.A, Tishchenko, S.V, Nikonov, S.V.
登録日2014-09-23
公開日2015-03-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Protein-RNA affinity of ribosomal protein L1 mutants does not correlate with the number of intermolecular interactions.
Acta Crystallogr.,Sect.D, 71, 2015
1DWU
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BU of 1dwu by Molmil
Ribosomal protein L1
分子名称: RIBOSOMAL PROTEIN L1
著者Tishchenko, S.V, Nevskaya, N.A, Pavelyev, M.N, Nikonov, S.V, Garber, M.B, Piendl, W.
登録日1999-12-13
公開日2000-12-07
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of Ribosomal Protein L1 from Methanococcus Thermolithotrophicus. Functionally Important Structural Invariants on the L1 Surface
Acta Crystallogr.,Sect.D, 58, 2002
1Y4I
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BU of 1y4i by Molmil
Crystal structure of Citrobacter Freundii L-methionine-lyase
分子名称: SULFATE ION, methionine gamma-lyase
著者Revtovich, S.V, Mamaeva, D.V, Morozova, E.A, Nikulin, A.D, Nikonov, S.V, Garber, M.B, Demidkina, T.V.
登録日2004-12-01
公開日2005-06-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Citrobacter freundii L-methionine gamma-lyase.
Acta Crystallogr.,Sect.F, 61, 2005
5ML7
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BU of 5ml7 by Molmil
CRYSTAL STRUCTURE OF L1-STALK FRAGMENT OF 23S rRNA FROM HALOARCULA MARISMORTUI
分子名称: 23S ribosomal RNA, CALCIUM ION, MAGNESIUM ION
著者Gabdulkhakov, A.G, Tishchenko, T.V, Nevskaya, N.A, Nikonov, S.V.
登録日2016-12-06
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal Structure of the 23S rRNA Fragment Specific to r-Protein L1 and Designed Model of the Ribosomal L1 Stalk from Haloarcula marismortui
Crystals, 2017
5NPM
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BU of 5npm by Molmil
CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN TTHL1 LACKING 8 N-TERMINAL RESIDUES IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS
分子名称: 23S ribosomal RNA, 50S ribosomal protein L1, MALONATE ION, ...
著者Gabdulkhakov, A.G, Tishchenko, T.V, Nevskaya, N.A, Nikonov, S.V, Garber, M.B.
登録日2017-04-17
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献[Influence of Nonconserved Regions of L1 Protuberance of Thermus thermophilus Ribosome on the Affinity of L1 Protein to 23s rRNA].
Mol.Biol.(Moscow), 52, 2018
1I2A
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BU of 1i2a by Molmil
CRYSTAL STRUCTURE OF L1 RIBOSOMAL PROTEIN FROM METHANOCOCCUS JANNASCHII WITH 1.85A RESOLUTION.
分子名称: 50S RIBOSOMAL PROTEIN L1P, PENTANAL
著者Smolinskaya, Y, Nikonov, S.V.
登録日2001-02-07
公開日2003-12-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献

 

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