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PDB: 197 件

7NZI
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TrmB complex with SAH
分子名称: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine-N(7)-)-methyltransferase
著者Blersch, K.F, Ficner, R, Neumann, P.
登録日2021-03-24
公開日2021-09-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA.
Rna Biol., 18, 2021
7NYB
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TrmB complex with SAM
分子名称: S-ADENOSYLMETHIONINE, tRNA (guanine-N(7)-)-methyltransferase
著者Blersch, K.F, Ficner, R, Neumann, P.
登録日2021-03-22
公開日2021-09-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA.
Rna Biol., 18, 2021
5AFI
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BU of 5afi by Molmil
2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Konevega, A.L, Bock, L.V, Ficner, R, Rodnina, M.V, Stark, H.
登録日2015-01-22
公開日2015-03-11
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of the E. coli ribosome-EF-Tu complex at <3 angstrom resolution by Cs-corrected cryo-EM.
Nature, 520, 2015
4ZP1
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BU of 4zp1 by Molmil
Crystal structure of Zymomonas mobilis pyruvate decarboxylase variant Glu473Ala
分子名称: GLYCEROL, MAGNESIUM ION, NICKEL (II) ION, ...
著者Wechsler, C, Neumann, P, Tittmann, K.
登録日2015-05-07
公開日2015-11-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Tuning and Switching Enantioselectivity of Asymmetric Carboligation in an Enzyme through Mutational Analysis of a Single Hot Spot.
Chembiochem, 16, 2015
3GJX
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BU of 3gjx by Molmil
Crystal Structure of the Nuclear Export Complex CRM1-Snurportin1-RanGTP
分子名称: CHLORIDE ION, Exportin-1, GTP-binding nuclear protein Ran, ...
著者Monecke, T, Guettler, T, Neumann, P, Dickmanns, A, Goerlich, D, Ficner, R.
登録日2009-03-09
公開日2009-05-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the Nuclear Export Receptor CRM1 in Complex with Snurportin1 and RanGTP.
Science, 2009
6F2C
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Methylglyoxal synthase MgsA from Bacillus subtilis
分子名称: CHLORIDE ION, GLYCEROL, Methylglyoxal synthase
著者Dickmanns, A, Neumann, P, Ficner, R.
登録日2017-11-24
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural basis for the regulatory interaction of the methylglyoxal synthase MgsA with the carbon flux regulator Crh inBacillus subtilis.
J. Biol. Chem., 293, 2018
6FA9
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CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2
分子名称: Putative mRNA splicing factor, SULFATE ION
著者Schmitt, A, Hamann, F, Neumann, P, Ficner, R.
登録日2017-12-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
6FDF
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Crystal structure of S. pombe Dnmt2 methyltransferase
分子名称: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytosine(38)-C(5))-methyltransferase
著者Johannsson, S, Neumann, P, Ficner, R.
登録日2017-12-22
公開日2018-06-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献Structural insights into the stimulation of S. pombe Dnmt2 catalytic efficiency by the tRNA nucleoside queuosine.
Sci Rep, 8, 2018
6FA5
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CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
著者Hamann, F, Schmitt, A, Neumann, P, Ficner, R.
登録日2017-12-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
6FAA
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BU of 6faa by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ETHANOL, GLYCEROL, ...
著者Schmitt, A, Hamann, F, Neumann, P, Ficner, R.
登録日2017-12-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
5LZC
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BU of 5lzc by Molmil
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5LZE
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BU of 5lze by Molmil
Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
6YJ8
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DarB-APO
分子名称: ACETATE ION, CBS domain-containing protein YkuL, DI(HYDROXYETHYL)ETHER
著者Heidemann, J.L, Neumann, P, Ficner, R.
登録日2020-04-02
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献DarB from B. subtilis
To Be Published
6YJ9
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DarB in complex with 3'3'cGAMP
分子名称: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, CBS domain-containing protein YkuL, CHLORIDE ION
著者Heidemann, J.L, Neumann, P, Ficner, R.
登録日2020-04-02
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献DarB from B. subtilis
To Be Published
6YJ7
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BU of 6yj7 by Molmil
DarB fom B. subtilis in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, CBS domain-containing protein YkuL, CHLORIDE ION
著者Heidemann, J.L, Neumann, P, Ficner, R.
登録日2020-04-02
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献DarB from B. subtilis
To Be Published
6YJA
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BU of 6yja by Molmil
DarB fom B. subtilis in complex with c-di-AMP
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CALCIUM ION, CBS domain-containing protein YkuL, ...
著者Heidemann, J.L, Neumann, P, Ficner, R.
登録日2020-04-02
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献DarB from B. subtilis
To Be Published
6H42
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BU of 6h42 by Molmil
crystal structure of the human TGT catalytic subunit QTRT1
分子名称: BROMIDE ION, CHLORIDE ION, GLUTAMIC ACID, ...
著者Johannsson, S, Neumann, P, Ficner, R.
登録日2018-07-20
公開日2018-09-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of the Human tRNA Guanine Transglycosylase Catalytic Subunit QTRT1.
Biomolecules, 8, 2018
5LZB
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BU of 5lzb by Molmil
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
6H45
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crystal structure of the human TGT catalytic subunit QTRT1 in complex with queuine
分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, BROMIDE ION, CHLORIDE ION, ...
著者Johannsson, S, Neumann, P, Ficner, R.
登録日2018-07-20
公開日2018-09-05
最終更新日2023-03-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Human tRNA Guanine Transglycosylase Catalytic Subunit QTRT1.
Biomolecules, 8, 2018
5LZD
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BU of 5lzd by Molmil
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5MED
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BU of 5med by Molmil
Cyanothece lipoxygenase 2 (CspLOX2)
分子名称: 1,3-PROPANDIOL, 1,4-BUTANEDIOL, 1-BUTANOL, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEF
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BU of 5mef by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304F
分子名称: Arachidonate 15-lipoxygenase, CHLORIDE ION, FE (III) ION, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.357 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEE
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BU of 5mee by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304V
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Arachidonate 15-lipoxygenase, FE (III) ION, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEG
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BU of 5meg by Molmil
Manganese-substituted Cyanothece lipoxygenase 2 (Mn-CspLOX2)
分子名称: Arachidonate 15-lipoxygenase, CHLORIDE ION, ETHANOL, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
6FAC
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BU of 6fac by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Schmitt, A, Hamann, F, Neumann, P, Ficner, R.
登録日2017-12-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018

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件を2024-10-30に公開中

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