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PDB: 42 件
2GO2
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BU of 2go2 by Molmil
Crystal structure of BbKI, a Kunitz-type kallikrein inhibitor
分子名称: 1,2-ETHANEDIOL, Kunitz-type serine protease inhibitor BbKI
著者Navarro, M.V.A.S, Garratt, R.C.
登録日2006-04-12
公開日2007-03-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献The Crystal Structure of BbKI, a kunitz-type kallikrein inhibitor devoid of disulfide bridges
To be Published, 2006
5EXT
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BU of 5ext by Molmil
AAA+ domain of FleQ from Pseudomonas aeruginosa bound to ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transcriptional regulator FleQ
著者Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.Y.
登録日2015-11-24
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EXP
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BU of 5exp by Molmil
AAA+ domain of FleQ from Pseudomonas aeruginosa
分子名称: 1,2-ETHANEDIOL, SULFATE ION, Transcriptional regulator FleQ
著者Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.Y.
登録日2015-11-24
公開日2016-01-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EXS
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BU of 5exs by Molmil
AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to ATP-gamma-S
分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transcriptional regulator FleQ
著者Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.
登録日2015-11-24
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EXX
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BU of 5exx by Molmil
AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), SULFATE ION, Transcriptional regulator FleQ
著者Navarro, M.V.A.S, Sondermann, H, Krasteva, P.V.
登録日2015-11-24
公開日2016-02-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.311 Å)
主引用文献Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
2GOJ
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BU of 2goj by Molmil
The crystal structure of the enzyme Fe-superoxide dismutase from Plasmodium falciparum
分子名称: FE (II) ION, Fe-superoxide dismutase
著者Navarro, M.V.A.S, Garratt, R.C.
登録日2006-04-13
公開日2007-08-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Systematic structural studies of iron superoxide dismutases from human parasites and a statistical coupling analysis of metal binding specificity
Proteins, 77, 2009
2GPC
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BU of 2gpc by Molmil
The crystal structure of the enzyme Fe-superoxide dismutase from Trypanosoma cruzi
分子名称: FE (II) ION, MAGNESIUM ION, iron superoxide dismutase
著者Navarro, M.V.A.S, Garratt, R.C.
登録日2006-04-17
公開日2007-08-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Systematic structural studies of iron superoxide dismutases from human parasites and a statistical coupling analysis of metal binding specificity
Proteins, 77, 2009
3HV8
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BU of 3hv8 by Molmil
Crystal structure of FimX EAL domain from Pseudomonas aeruginosa bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Protein FimX
著者Navarro, M.V.A.S, De, N, Bae, N, Sondermann, H.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.445 Å)
主引用文献Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX.
Structure, 17, 2009
3I5C
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BU of 3i5c by Molmil
Crystal structure of a fusion protein containing the leucine zipper of GCN4 and the GGDEF domain of WspR from Pseudomonas aeruginosa
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Fusion of General control protein GCN4 and WSPR response regulator protein, MAGNESIUM ION
著者Navarro, M.V.A.S, De, N, Sondermann, H.
登録日2009-07-03
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR.
J.Mol.Biol., 393, 2009
3I5B
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BU of 3i5b by Molmil
Crystal structure of the isolated GGDEF domain of WpsR from Pseudomonas aeruginosa
分子名称: L(+)-TARTARIC ACID, WspR response regulator
著者Navarro, M.V.A.S, De, N, Sondermann, H.
登録日2009-07-03
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR.
J.Mol.Biol., 393, 2009
3HV9
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BU of 3hv9 by Molmil
Crystal structure of FimX EAL domain from Pseudomonas aeruginosa
分子名称: GLYCEROL, Protein FimX
著者Navarro, M.V.A.S, De, N, Bae, N, Sondermann, H.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX.
Structure, 17, 2009
3I5A
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BU of 3i5a by Molmil
Crystal structure of full-length WpsR from Pseudomonas syringae
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Response regulator/GGDEF domain protein, STRONTIUM ION
著者Navarro, M.V.A.S, De, N, Sondermann, H.
登録日2009-07-03
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.796 Å)
主引用文献Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR.
J.Mol.Biol., 393, 2009
3HVA
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BU of 3hva by Molmil
Crystal structure of FimX GGDEF domain from Pseudomonas aeruginosa
分子名称: Protein FimX
著者Navarro, M.V.A.S, De, N, Bae, N, Sondermann, H.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.042 Å)
主引用文献Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX.
Structure, 17, 2009
2PTW
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BU of 2ptw by Molmil
Crystal Structure of the T. brucei enolase complexed with sulphate, identification of a metal binding site IV
分子名称: 1,2-ETHANEDIOL, Enolase, SULFATE ION, ...
著者Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
登録日2007-05-08
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007
2PTY
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BU of 2pty by Molmil
Crystal Structure of the T. brucei enolase complexed with PEP
分子名称: 1,2-ETHANEDIOL, Enolase, PHOSPHOENOLPYRUVATE, ...
著者Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
登録日2007-05-08
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007
2PTX
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BU of 2ptx by Molmil
Crystal Structure of the T. brucei enolase complexed with sulphate in closed conformation
分子名称: 1,2-ETHANEDIOL, Enolase, SULFATE ION, ...
著者Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
登録日2007-05-08
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007
2PU1
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BU of 2pu1 by Molmil
Crystal Structure of the T. brucei enolase complexed with Fluoro-phosphonoacetohydroxamate (FPAH)
分子名称: 1,2-ETHANEDIOL, Enolase, ZINC ION, ...
著者Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
登録日2007-05-08
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007
2PTZ
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BU of 2ptz by Molmil
Crystal Structure of the T. brucei enolase complexed with phosphonoacetohydroxamate (PAH), His156-out conformation
分子名称: 1,2-ETHANEDIOL, Enolase, PHOSPHONOACETOHYDROXAMIC ACID, ...
著者Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
登録日2007-05-08
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007
2PU0
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BU of 2pu0 by Molmil
Crystal Structure of the T. brucei enolase complexed with phosphonoacetohydroxamate (PAH), His156-in conformation
分子名称: 1,2-ETHANEDIOL, Enolase, PHOSPHONOACETOHYDROXAMIC ACID, ...
著者Navarro, M.V.A.S, Rigden, D.J, Garratt, R.C, Dias, S.M.G.
登録日2007-05-08
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
Febs J., 274, 2007
2PO2
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BU of 2po2 by Molmil
Crystal structure of the P. abyssi exosome RNase PH ring complexed with CDP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-5'-DIPHOSPHATE, Probable exosome complex exonuclease 1, ...
著者Navarro, M.V.A.S, Guimaraes, B.G.
登録日2007-04-25
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
2PNZ
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BU of 2pnz by Molmil
Crystal structure of the P. abyssi exosome RNase PH ring complexed with UDP and GMP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Probable exosome complex exonuclease 1, ...
著者Navarro, M.V.A.S, Guimaraes, B.G.
登録日2007-04-25
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
2PO1
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BU of 2po1 by Molmil
Crystal structure of the P. abyssi exosome RNase PH ring complexed with a single stranded 10-mer poly(A) RNA
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 10-mer poly(A), Probable exosome complex exonuclease 1, ...
著者Navarro, M.V.A.S, Guimaraes, B.G.
登録日2007-04-25
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
2PO0
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BU of 2po0 by Molmil
Crystal structure of the P. abyssi exosome RNase PH ring complexed with ADP in double conformation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Probable exosome complex exonuclease 1, ...
著者Navarro, M.V.A.S, Guimaraes, B.G.
登録日2007-04-25
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
1OEP
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BU of 1oep by Molmil
Structure of Trypanosoma brucei enolase reveals the inhibitory divalent metal site
分子名称: 1,2-ETHANEDIOL, ENOLASE, SULFATE ION, ...
著者Da Silva giotto, M.T, Navarro, M.V.A.S, Garratt, R.C, Rigden, D.J.
登録日2003-03-28
公開日2003-04-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Crystal Structure of Trypanosoma Brucei Enolase: Visualisation of the Inhibitory Metal Binding Site III and Potential as Target for Selective, Irreversible Inhibition
J.Mol.Biol., 331, 2003
3PJX
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BU of 3pjx by Molmil
Structure of Pseudomonas fluorescence LapD GGDEF-EAL dual domain, P32
分子名称: 1,2-ETHANEDIOL, Cyclic dimeric GMP binding protein
著者Sondermann, H, Navarro, M.V.A.S.
登録日2010-11-10
公開日2011-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.0002 Å)
主引用文献Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011

 

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