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PDB: 278 件
8CWX
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BU of 8cwx by Molmil
NMR structure of a Stapled Lanthipeptide Natural Product
分子名称: Lanthipeptide Natural Product mSmoAc
著者Pei, Z, Zhu, L, Nair, S.K.
登録日2022-05-19
公開日2022-10-12
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Class V Lanthipeptide Cyclase Directs the Biosynthesis of a Stapled Peptide Natural Product.
J.Am.Chem.Soc., 144, 2022
6MJF
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BU of 6mjf by Molmil
Catalytic Domain of dbOphMA
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, dbOphM
著者Ongpipatanakul, C, Nair, S.K.
登録日2018-09-20
公開日2018-10-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献Molecular Basis for Autocatalytic Backbone N-Methylation in RiPP Natural Product Biosynthesis.
ACS Chem. Biol., 13, 2018
8CZK
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Human LanCL1 bound to GSH and Dhb-Erk peptide
分子名称: Deb-Erk peptide, GLUTATHIONE, Glutathione S-transferase LANCL1, ...
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-24
公開日2023-01-25
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D19
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Human LanCL1 bound to GSH
分子名称: GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-26
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8CZL
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Human LanCL1 bound to methyl glutathione (MeGSH)
分子名称: Glutathione S-transferase LANCL1, L-GAMMA-GLUTAMYL-S-METHYLCYSTEINYLGLYCINE, ZINC ION
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-24
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D0V
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BU of 8d0v by Molmil
Human LanCL1 C264A mutant bound to GSH
分子名称: GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-26
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
6MPZ
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BU of 6mpz by Molmil
Crystal structure of a double glycine motif protease from AMS/PCAT transporter in complex with the leader peptide
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE, Double Glycine Motif Protease domain from AMS/PCAT Transporter, peptide aldehyde inhibitor 1 based on the ProcA2.8 leader peptide
著者Dong, S.-H, Nair, S.K.
登録日2018-10-09
公開日2019-02-06
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into AMS/PCAT transporters from biochemical and structural characterization of a double Glycine motif protease.
Elife, 8, 2019
6MJG
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BU of 6mjg by Molmil
Structure of dbOphMA in Complex with SAH and Methylated Peptide
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, fusion protein of dbOphMA and methylated peptide
著者Ongpipattanakul, C, Nair, S.K.
登録日2018-09-20
公開日2018-10-03
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.123 Å)
主引用文献Molecular Basis for Autocatalytic Backbone N-Methylation in RiPP Natural Product Biosynthesis.
ACS Chem. Biol., 13, 2018
6NMX
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Threonine synthase from Bacillus subtilis ATCC 6633 with PLP and APPA
分子名称: (2E,3Z)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-5-phosphonopent-3-enoic acid, Threonine synthase
著者Petronikolou, N, Nair, S.K.
登録日2019-01-12
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.971 Å)
主引用文献Molecular Basis of Bacillus subtilis ATCC 6633 Self-Resistance to the Phosphono-oligopeptide Antibiotic Rhizocticin.
ACS Chem. Biol., 14, 2019
8F72
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Phage P32 gp64- RNA polymerase
分子名称: MAGNESIUM ION, TPR_REGION domain-containing protein
著者Bae, B, Nair, S.K.
登録日2022-11-17
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Thermophage RNA polymerase
To Be Published
8F5M
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Crystal structure of P74 gp62
分子名称: Envelope glycoprotein gp62, MAGNESIUM ION
著者Bae, B, Nair, S.K.
登録日2022-11-14
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
5F2O
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Crystal structure of mycobacterial fatty acid O-methyltransferase Q154A mutant in complex with SAH and 3-hydroxy-decanoate.
分子名称: (3~{S})-3-oxidanyldecanoic acid, S-ADENOSYL-L-HOMOCYSTEINE, fatty acid O-methyltransferase
著者Petronikolou, N, Nair, S.K.
登録日2015-12-02
公開日2015-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Biochemical Studies of Mycobacterial Fatty Acid Methyltransferase: A Catalyst for the Enzymatic Production of Biodiesel.
Chem.Biol., 22, 2015
5F2N
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Crystal structure of mycobacterial fatty acid O-methyltransferase in complex with SAH and 3-hydroxy-decanoate.
分子名称: (3~{S})-3-oxidanyldecanoic acid, S-ADENOSYL-L-HOMOCYSTEINE, fatty acid O-methyltransferase
著者Petronikolou, N, Nair, S.K.
登録日2015-12-02
公開日2015-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biochemical Studies of Mycobacterial Fatty Acid Methyltransferase: A Catalyst for the Enzymatic Production of Biodiesel.
Chem.Biol., 22, 2015
5F2K
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BU of 5f2k by Molmil
Crystal structure of mycobacterial fatty acid O-methyltransferase in complex with SAH and octanoate
分子名称: OCTANOIC ACID (CAPRYLIC ACID), S-ADENOSYL-L-HOMOCYSTEINE, fatty acid O-methyltransferase
著者Petronikolou, N, Nair, S.K.
登録日2015-12-02
公開日2015-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Biochemical Studies of Mycobacterial Fatty Acid Methyltransferase: A Catalyst for the Enzymatic Production of Biodiesel.
Chem.Biol., 22, 2015
5EHK
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BU of 5ehk by Molmil
Crystal structure of tRNA dependent lantibiotic dehydratase MibB from Microbispora sp. 107891
分子名称: Lantibiotic dehydratase
著者Hao, Y, Nair, S.K.
登録日2015-10-28
公開日2016-03-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.708 Å)
主引用文献Structure and tRNA Specificity of MibB, a Lantibiotic Dehydratase from Actinobacteria Involved in NAI-107 Biosynthesis.
Cell Chem Biol, 23, 2016
5DZT
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BU of 5dzt by Molmil
Crystal structure of class II lanthipeptide synthetase CylM in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, CylM, ZINC ION
著者Dong, S.H, Lukk, T, Nair, S.K.
登録日2015-09-26
公開日2015-10-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The enterococcal cytolysin synthetase has an unanticipated lipid kinase fold.
Elife, 4, 2015
7QOS
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BU of 7qos by Molmil
Cyclopropane fatty acid synthase from Aquifex aeolicous with bound ligands
分子名称: 2-azanylethyl-[(2~{S})-2,3-di(hexadecanoyloxy)propoxy]phosphinic acid, CARBONATE ION, Cyclopropane-fatty-acyl-phospholipid synthase, ...
著者Lukk, T, Cronan, J.E, Nair, S.K.
登録日2021-12-28
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of cyclopropane fatty acid synthase from Aquifex aeolicus
To Be Published
7RTY
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BU of 7rty by Molmil
Crystal Structure of PsfC from Pseudomonas syringae PB-5123
分子名称: FE (II) ION, PsfC
著者Ongpipattanakul, C, Nair, S.K.
登録日2021-08-16
公開日2021-09-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.963 Å)
主引用文献Biosynthesis of fosfomycin in pseudomonads reveals an unexpected enzymatic activity in the metallohydrolase superfamily.
Proc.Natl.Acad.Sci.USA, 118, 2021
6WNS
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BU of 6wns by Molmil
The structure of a CoA-dependent acyl-homoserine lactone synthase, MesI
分子名称: Acyl-homoserine-lactone synthase
著者Dong, S.-H, Nair, S.K.
登録日2020-04-23
公開日2020-05-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structure-Guided Biochemical Analysis of Quorum Signal Synthase Specificities.
Acs Chem.Biol., 15, 2020
6WPA
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BU of 6wpa by Molmil
Structure of AvaR1 bound to DNA half-site
分子名称: AvaR1, PAL2-1-5'-GC
著者Kapoor, I, Olivares, P.J, Nair, S.K.
登録日2020-04-26
公開日2020-07-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones.
Elife, 9, 2020
6WN0
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BU of 6wn0 by Molmil
The structure of a CoA-dependent acyl-homoserine lactone synthase, RpaI, with the adduct of SAH and p-coumaroyl CoA
分子名称: (2S)-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)-2-{[(2E)-3-(cis-4-hydroxycyclohexa-2,5-dien-1-yl)prop-2-enoyl]amino}butanoic acid, 4-coumaroyl-homoserine lactone synthase, COENZYME A
著者Dong, S.-H, Nair, S.K.
登録日2020-04-22
公開日2020-05-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-Guided Biochemical Analysis of Quorum Signal Synthase Specificities.
Acs Chem.Biol., 15, 2020
7RC3
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BU of 7rc3 by Molmil
Aeronamide N-methyltransferase, AerE (Y137F)
分子名称: ASPARTIC ACID, CALCIUM ION, HEXAETHYLENE GLYCOL, ...
著者Cogan, D.P, Reyes, R, Nair, S.K.
登録日2021-07-07
公開日2022-03-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC4
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BU of 7rc4 by Molmil
Aeronamide N-methyltransferase, AerE (D141A)
分子名称: CALCIUM ION, HEXAETHYLENE GLYCOL, Methyltransferase family protein, ...
著者Cogan, D.P, Reyes, R, Nair, S.K.
登録日2021-07-07
公開日2022-03-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC6
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BU of 7rc6 by Molmil
Aeronamide N-methyltransferase, AerE, bound to modified peptide substrate, AerA-DL,34
分子名称: Aeronamide A peptide, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Cogan, D.P, Reyes, R, Nair, S.K.
登録日2021-07-07
公開日2022-03-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC5
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Aeronamide N-methyltransferase, AerE (N231A)
分子名称: CALCIUM ION, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Cogan, D.P, Reyes, R, Nair, S.K.
登録日2021-07-07
公開日2022-03-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022

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