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PDB: 282 件

3TBB
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Small laccase from Streptomyces viridosporus T7A; alternate crystal form.
分子名称: COPPER (II) ION, OXYGEN MOLECULE, PHOSPHATE ION, ...
著者Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
登録日2011-08-05
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3DFK
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BU of 3dfk by Molmil
The crystal structure of teicoplanin pseudoaglycone deacetylase Orf2* bound to one of its products decanoic acid
分子名称: DECANOIC ACID, Teicoplanin pseudoaglycone deacetylase Orf2, ZINC ION
著者Zou, Y, Brunzelle, J.S, Nair, S.K.
登録日2008-06-12
公開日2008-07-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin.
Chem.Biol., 15, 2008
3Q4D
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BU of 3q4d by Molmil
Crystal structure of dipeptide epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Ala
分子名称: ALANINE, D-ALANINE, MAGNESIUM ION, ...
著者Lukk, T, Gerlt, J.A, Nair, S.K.
登録日2010-12-23
公開日2011-02-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3RO6
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Crystal structure of Dipeptide Epimerase from Methylococcus capsulatus complexed with Mg ion
分子名称: GLYCEROL, MAGNESIUM ION, Putative chloromuconate cycloisomerase, ...
著者Lukk, T, Sakai, A, Song, L, Gerlt, J.A, Nair, S.K.
登録日2011-04-25
公開日2011-05-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3Q45
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BU of 3q45 by Molmil
Crystal structure of Dipeptide Epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Val
分子名称: D-ALANINE, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme family; possible chloromuconate cycloisomerase, ...
著者Lukk, T, Gerlt, J.A, Nair, S.K.
登録日2010-12-22
公開日2011-02-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3RIT
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BU of 3rit by Molmil
Crystal structure of Dipeptide Epimerase from Methylococcus capsulatus complexed with Mg and dipeptide L-Arg-D-Lys
分子名称: ARGININE, D-LYSINE, Dipeptide epimerase, ...
著者Lukk, T, Sakai, A, Song, L, Gerlt, J.A, Nair, S.K.
登録日2011-04-14
公開日2011-04-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3DFF
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BU of 3dff by Molmil
The crystal structure of teicoplanin pseudoaglycone deacetylase Orf2
分子名称: GLYCEROL, TETRAETHYLENE GLYCOL, Teicoplanin pseudoaglycone deacetylases Orf2, ...
著者Zou, Y, Brunzelle, J.S, Nair, S.K.
登録日2008-06-11
公開日2008-07-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin.
Chem.Biol., 15, 2008
3IX4
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LasR-TP1 complex
分子名称: 2,4-dibromo-6-({[(2-nitrophenyl)carbonyl]amino}methyl)phenyl 2-chlorobenzoate, Transcriptional activator protein lasR
著者Zou, Y, Nair, S.K.
登録日2009-09-03
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor.
Chem.Biol., 16, 2009
3OU7
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DhpI-SAM-HEP complex
分子名称: (2-hydroxyethyl)phosphonic acid, S-ADENOSYLMETHIONINE, SAM-dependent methyltransferase, ...
著者Bae, B, Nair, S.K.
登録日2010-09-14
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization and structure of DhpI, a phosphonate O-methyltransferase involved in dehydrophos biosynthesis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3OU6
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DhpI-SAM complex
分子名称: S-ADENOSYLMETHIONINE, SAM-dependent methyltransferase, SULFATE ION
著者Bae, B, Nair, S.K.
登録日2010-09-14
公開日2010-10-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization and structure of DhpI, a phosphonate O-methyltransferase involved in dehydrophos biosynthesis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3SZY
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Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in APO form
分子名称: ZINC ION, phosphonoacetate hydrolase
著者Agarwal, V, Nair, S.K.
登録日2011-07-19
公開日2011-08-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3OU2
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DhpI-SAH complex structure
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
著者Bae, B, Nair, S.K.
登録日2010-09-14
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Characterization and structure of DhpI, a phosphonate O-methyltransferase involved in dehydrophos biosynthesis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3T01
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Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Phosphonoformate
分子名称: PHOSPHONOFORMIC ACID, ZINC ION, phosphonoacetate hydrolase
著者Agarwal, V, Nair, S.K.
登録日2011-07-19
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3SZZ
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BU of 3szz by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Acetate
分子名称: ACETATE ION, ZINC ION, phosphonoacetate hydrolase
著者Agarwal, V, Nair, S.K.
登録日2011-07-19
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3T00
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Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with vanadate
分子名称: NICKEL (II) ION, VANADATE ION, ZINC ION, ...
著者Agarwal, V, Nair, S.K.
登録日2011-07-19
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3T02
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BU of 3t02 by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Phosphonoacetate
分子名称: PHOSPHONOACETIC ACID, ZINC ION, phosphonoacetate hydrolase
著者Agarwal, V, Nair, S.K.
登録日2011-07-19
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3IX8
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BU of 3ix8 by Molmil
LasR-TP3 complex
分子名称: 2,4-dibromo-6-({[(2-chlorophenyl)carbonyl]amino}methyl)phenyl 2-methylbenzoate, Transcriptional activator protein lasR
著者Zou, Y, Nair, S.K.
登録日2009-09-03
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor.
Chem.Biol., 16, 2009
3JPU
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BU of 3jpu by Molmil
LasR-TP4 complex
分子名称: 4-bromo-2-({[(2-chlorophenyl)carbonyl]amino}methyl)-6-methylphenyl 2,4-dichlorobenzoate, Transcriptional activator protein lasR
著者Zou, Y, Nair, S.K.
登録日2009-09-04
公開日2009-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor.
Chem.Biol., 16, 2009
3IX3
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BU of 3ix3 by Molmil
LasR-OC12 HSL complex
分子名称: N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONE, Transcriptional activator protein lasR
著者Zou, Y, Nair, S.K.
登録日2009-09-03
公開日2009-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献LasR-OC12 HSL complex
TO BE PUBLISHED
3OO3
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BU of 3oo3 by Molmil
Crystal Structure of the Orf6* (CYP165D3) Monooxygenase Involved in Teicoplanin Biosynthesis
分子名称: Oxy protein, PROTOPORPHYRIN IX CONTAINING FE
著者Li, Z, Nair, S.K.
登録日2010-08-30
公開日2011-01-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a phenol-coupling P450 monooxygenase involved in teicoplanin biosynthesis.
Proteins, 79, 2011
3SMA
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BU of 3sma by Molmil
A new N-acetyltransferase fold in the structure and mechanism of the phosphonate biosynthetic enzyme FrbF
分子名称: ACETYL COENZYME *A, FrbF
著者Bae, B, Nair, S.K.
登録日2011-06-27
公開日2011-08-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献New N-Acetyltransferase Fold in the Structure and Mechanism of the Phosphonate Biosynthetic Enzyme FrbF.
J.Biol.Chem., 286, 2011
3OEB
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BU of 3oeb by Molmil
Crystal structure of the Q121E mutant of C.polysaccharolyticus CBM16-1 bound to mannopentaose
分子名称: CALCIUM ION, S-layer associated multidomain endoglucanase, SULFATE ION, ...
著者Agarwal, V, Nair, S.K.
登録日2010-08-12
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules.
J.Biol.Chem., 285, 2010
3TLE
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BU of 3tle by Molmil
Microcin C7 self immunity protein MccF in complex with glutamyl sulfamoyl adenylate
分子名称: 1,2-ETHANEDIOL, MccF, O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE
著者Agarwal, V, Nair, S.K.
登録日2011-08-29
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3OEA
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BU of 3oea by Molmil
Crystal structure of the Q121E mutants of C.polysaccharolyticus CBM16-1 bound to cellopentaose
分子名称: CALCIUM ION, S-layer associated multidomain endoglucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Agarwal, V, Nair, S.K.
登録日2010-08-12
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules.
J.Biol.Chem., 285, 2010
3T33
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Crystal Structure of Arabidopsis GCR2
分子名称: ACETATE ION, G protein coupled receptor, ZINC ION
著者Chen, J.-H, Guo, J, Chen, J.-G, Nair, S.K.
登録日2011-07-24
公開日2013-04-17
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Arabidopsis GCR2 Identifies a Novel Clade of Lantibiotic Cyclase-Like Proteins
To be Published

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件を2024-06-12に公開中

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