1UHN
| The crystal structure of the calcium binding protein AtCBL2 from Arabidopsis thaliana | 分子名称: | CALCIUM ION, calcineurin B-like protein 2 | 著者 | Nagae, M, Nozawa, A, Koizumi, N, Sano, H, Hashimoto, H, Sato, M, Shimizu, T. | 登録日 | 2003-07-07 | 公開日 | 2003-11-04 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | The Crystal Structure of the Novel Calcium-binding Protein AtCBL2 from Arabidopsis thaliana J.Biol.Chem., 278, 2003
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5GZ8
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5GZ9
| Crystal structure of catalytic domain of Protein O-mannosyl Kinase in complexes with AMP-PNP, Magnesium ions and glycopeptide | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Protein O-mannose kinase, ... | 著者 | Nagae, M, Yamaguchi, Y. | 登録日 | 2016-09-27 | 公開日 | 2017-03-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | 3D structural analysis of protein O-mannosyl kinase, POMK, a causative gene product of dystroglycanopathy. Genes Cells, 22, 2017
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2EAE
| Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complexes with products | 分子名称: | Alpha-fucosidase, CALCIUM ION, alpha-L-fucopyranose, ... | 著者 | Nagae, M, Tsuchiya, A, Katayama, T, Yamamoto, K, Wakatsuki, S, Kato, R. | 登録日 | 2007-01-31 | 公開日 | 2007-04-24 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structural basis on the catalytic reaction mechanism of novel 1,2-alpha-L-fucosidase (AFCA) from Bifidobacterium bifidum J.Biol.Chem., 282, 2007
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2EAB
| Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum (apo form) | 分子名称: | 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-fucosidase, ... | 著者 | Nagae, M, Tsuchiya, A, Katayama, T, Yamamoto, K, Wakatsuki, S, Kato, R. | 登録日 | 2007-01-31 | 公開日 | 2007-04-24 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.12 Å) | 主引用文献 | Structural basis on the catalytic reaction mechanism of novel 1,2-alpha-L-fucosidase (AFCA) from Bifidobacterium bifidum J.Biol.Chem., 282, 2007
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2EAC
| Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with deoxyfuconojirimycin | 分子名称: | (2S,3R,4S,5R)-2-METHYLPIPERIDINE-3,4,5-TRIOL, Alpha-fucosidase, CALCIUM ION | 著者 | Nagae, M, Tsuchiya, A, Katayama, T, Yamamoto, K, Wakatsuki, S, Kato, R. | 登録日 | 2007-01-31 | 公開日 | 2007-04-24 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural basis on the catalytic reaction mechanism of novel 1,2-alpha-L-fucosidase (AFCA) from Bifidobacterium bifidum J.Biol.Chem., 282, 2007
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2EAL
| Crystal structure of human galectin-9 N-terminal CRD in complex with Forssman pentasaccharide | 分子名称: | 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, Galectin-9 | 著者 | Nagae, M, Nakamura-Tsuruta, S, Nishi, N, Nakamura, T, Hirabayashi, J, Wakatsuki, S, Kato, R. | 登録日 | 2007-01-31 | 公開日 | 2007-09-25 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Structural analysis of the human galectin-9 N-terminal carbohydrate recognition domain reveals unexpected properties that differ from the mouse orthologue. J.Mol.Biol., 375, 2008
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2EAK
| Crystal structure of human galectin-9 N-terminal CRD in complex with lactose | 分子名称: | (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, GLYCEROL, Galectin-9, ... | 著者 | Nagae, M, Nakamura-Tsuruta, S, Nishi, N, Nakamura, T, Hirabayashi, J, Wakatsuki, S, Kato, R. | 登録日 | 2007-01-31 | 公開日 | 2007-09-25 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.97 Å) | 主引用文献 | Structural analysis of the human galectin-9 N-terminal carbohydrate recognition domain reveals unexpected properties that differ from the mouse orthologue. J.Mol.Biol., 375, 2008
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7F5K
| Crystal structure of TCR4-1 ectodomain | 分子名称: | T cell receptor alpha chain, T cell receptor beta chain | 著者 | Nagae, M, Yamasaki, S. | 登録日 | 2021-06-22 | 公開日 | 2022-06-22 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.0000298 Å) | 主引用文献 | Symbiotic bacteria-dependent expansion of MR1-reactive T cells causes autoimmunity in the absence of Bcl11b. Nat Commun, 13, 2022
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5GU5
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7EA6
| Crystal structure of TCR-017 ectodomain | 分子名称: | T cell receptor 017 alpha chain, T cell receptor 017 beta chain | 著者 | Nagae, M, Yamasaki, S. | 登録日 | 2021-03-06 | 公開日 | 2021-10-13 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.18000245 Å) | 主引用文献 | Identification of conserved SARS-CoV-2 spike epitopes that expand public cTfh clonotypes in mild COVID-19 patients. J.Exp.Med., 218, 2021
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5AZX
| Crystal structure of p24delta1 GOLD domain (native 1) | 分子名称: | SULFATE ION, Transmembrane emp24 domain-containing protein 10 | 著者 | Nagae, M, Yamaguchi, Y. | 登録日 | 2015-10-23 | 公開日 | 2016-09-14 | 最終更新日 | 2020-02-26 | 実験手法 | X-RAY DIFFRACTION (1.58 Å) | 主引用文献 | 3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport J.Mol.Biol., 428, 2016
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7VMT
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5AVA
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5AV7
| Crystal structure of Calsepa lectin in complex with bisected glycan | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)][2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]methyl alpha-D-mannopyranoside, Lectin | 著者 | Nagae, M, Yamaguchi, Y. | 登録日 | 2015-06-12 | 公開日 | 2016-04-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Atomic visualization of a flipped-back conformation of bisected glycans bound to specific lectins Sci Rep, 6, 2016
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5AZW
| Crystal structure of p24beta1 GOLD domain | 分子名称: | 1,2-ETHANEDIOL, Transmembrane emp24 domain-containing protein 2 | 著者 | Nagae, M, Yamaguchi, Y. | 登録日 | 2015-10-23 | 公開日 | 2016-09-14 | 最終更新日 | 2020-02-26 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | 3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport J.Mol.Biol., 428, 2016
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5AZY
| Crystal structure of p24delta1 GOLD domain (Native 2) | 分子名称: | 1,2-ETHANEDIOL, SULFATE ION, Transmembrane emp24 domain-containing protein 10 | 著者 | Nagae, M, Yamaguchi, Y. | 登録日 | 2015-10-23 | 公開日 | 2016-09-14 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | 3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport J.Mol.Biol., 428, 2016
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2ZOT
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2ZOU
| Crystal structure of human F-spondin reeler domain (fragment 2) | 分子名称: | 1,2-ETHANEDIOL, Spondin-1 | 著者 | Nagae, M, Nogi, T, Takagi, J. | 登録日 | 2008-06-07 | 公開日 | 2008-10-14 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Structure of the F-spondin reeler domain reveals a unique beta-sandwich fold with a deformable disulfide-bonded loop Acta Crystallogr.,Sect.D, 64, 2008
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5B1X
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5B1W
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6A48
| Crystal structure of reelin N-terminal region | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Reelin | 著者 | Nagae, M, Takagi, J. | 登録日 | 2018-06-19 | 公開日 | 2019-06-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural studies of reelin N-terminal region provides insights into a unique structural arrangement and functional multimerization. J.Biochem., 169, 2021
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2ZHM
| Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine trimer (crystal 1) | 分子名称: | (R)-1-PARA-NITRO-PHENYL-2-AZIDO-ETHANOL, Galectin-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Nagae, M, Nishi, N, Murata, T, Usui, T, Nakamura, T, Wakatsuki, S, Kato, R. | 登録日 | 2008-02-06 | 公開日 | 2008-12-30 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Structural analysis of the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain. Glycobiology, 19, 2009
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2ZHN
| Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine trimer (crystal 2) | 分子名称: | (R)-1-PARA-NITRO-PHENYL-2-AZIDO-ETHANOL, GALECTIN-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 著者 | Nagae, M, Nishi, N, Murata, T, Usui, T, Nakamura, T, Wakatsuki, S, Kato, R. | 登録日 | 2008-02-06 | 公開日 | 2008-12-30 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Structural analysis of the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain. Glycobiology, 19, 2009
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2D6L
| Crystal structure of mouse galectin-9 N-terminal CRD (crystal form 2) | 分子名称: | lectin, galactose binding, soluble 9 | 著者 | Nagae, M, Nishi, N, Nakamura, T, Wakatsuki, S, Kato, R. | 登録日 | 2005-11-14 | 公開日 | 2006-09-26 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal Structure of the Galectin-9 N-terminal Carbohydrate Recognition Domain from Mus musculus Reveals the Basic Mechanism of Carbohydrate Recognition J.Biol.Chem., 281, 2006
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