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PDB: 209 results

3BDF
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BU of 3bdf by Molmil
Crystal structure of metal-free E. coli alkaline phosphatase (T155V)
Descriptor: Alkaline phosphatase, SULFATE ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
3BDG
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BU of 3bdg by Molmil
Crystal structure of wild-type/T155V mixed dimer of E. coli alkaline phosphatase
Descriptor: Alkaline phosphatase, SULFATE ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
1A8E
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BU of 1a8e by Molmil
HUMAN SERUM TRANSFERRIN, RECOMBINANT N-TERMINAL LOBE
Descriptor: CARBONATE ION, FE (III) ION, SERUM TRANSFERRIN
Authors:Macgillivray, R.T.A, Moore, S.A, Chen, J, Anderson, B.F, Baker, H, Luo, Y, Bewley, M, Smith, C.A, Murphy, M.E.P, Wang, Y, Mason, A.B, Woodworth, R.C, Brayer, G.D, Baker, E.N.
Deposit date:1998-03-24
Release date:1998-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Two high-resolution crystal structures of the recombinant N-lobe of human transferrin reveal a structural change implicated in iron release.
Biochemistry, 37, 1998
3BDH
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BU of 3bdh by Molmil
Crystal structure of zinc-deficient wild-type E. coli alkaline phosphatase
Descriptor: Alkaline phosphatase, MAGNESIUM ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
2G5G
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BU of 2g5g by Molmil
Cofacial heme binding to ChaN of Campylobacter jejuni
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, putative lipoprotein
Authors:Chan, A.C, Murphy, M.E.
Deposit date:2006-02-22
Release date:2006-10-03
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cofacial Heme Binding is Linked to Dimerization by a Bacterial Heme Transport Protein.
J.Mol.Biol., 362, 2006
2PPE
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BU of 2ppe by Molmil
Reduced H145A mutant of AfNiR exposed to NO
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Stable copper-nitrosyl formation by nitrite reductase in either oxidation state
Biochemistry, 46, 2007
3RTL
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BU of 3rtl by Molmil
Staphylococcus aureus heme-bound IsdB-N2
Descriptor: CHLORIDE ION, Iron-regulated surface determinant protein B, MAGNESIUM ION, ...
Authors:Gaudin, C.F.M, Grigg, J.C, Arrieta, A.L, Murphy, M.E.P.
Deposit date:2011-05-03
Release date:2011-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.453 Å)
Cite:Unique Heme-Iron Coordination by the Hemoglobin Receptor IsdB of Staphylococcus aureus.
Biochemistry, 50, 2011
3LHS
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BU of 3lhs by Molmil
Open Conformation of HtsA Complexed with Staphyloferrin A
Descriptor: (2R)-2-(2-{[(1R)-1-carboxy-4-{[(3S)-3,4-dicarboxy-3-hydroxybutanoyl]amino}butyl]amino}-2-oxoethyl)-2-hydroxybutanedioic acid, FE (III) ION, Ferrichrome ABC transporter lipoprotein, ...
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-01-23
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Staphylococcus aureus siderophore receptor HtsA undergoes localized conformational changes to enclose staphyloferrin A in an arginine-rich binding pocket.
J.Biol.Chem., 285, 2010
4MP3
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BU of 4mp3 by Molmil
Staphyloferrin B precursor biosynthetic enzyme selenomethionine-labeled SbnB
Descriptor: GLYCEROL, Putative ornithine cyclodeaminase, SULFATE ION
Authors:Grigg, J.C, Kobylarz, M.J, Rai, D.K, Murphy, M.E.P.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
3QZM
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BU of 3qzm by Molmil
Staphylococcus aureus IsdA NEAT domain H83A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZN
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BU of 3qzn by Molmil
Staphylococcus aureus IsdA NEAT domain Y166A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZO
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BU of 3qzo by Molmil
Staphylococcus aureus IsdA NEAT domain in complex with heme, reduced crystal
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
4MPD
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BU of 4mpd by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnB bound a-ketoglutarate and NAD+
Descriptor: 2-OXOGLUTARIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), Putative ornithine cyclodeaminase
Authors:Kobylarz, M.J, Murphy, M.E.P.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
4MP6
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BU of 4mp6 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnB bound to citrate and NAD+
Descriptor: CITRIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative ornithine cyclodeaminase
Authors:Grigg, J.C, Kobylarz, M.J, Rai, D.K, Murphy, M.E.P.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
2PPA
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BU of 2ppa by Molmil
Anaerobically manipulated wild type oxidized AfNiR bound to nitrous oxide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
2PPC
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BU of 2ppc by Molmil
Oxidized wild type AfNiR exposed to NO (nitrite bound)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Stable copper-nitrosyl formation by nitrite reductase in either oxidation state.
Biochemistry, 46, 2007
2PPF
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BU of 2ppf by Molmil
Reduced mutant D98N of AfNiR exposed to nitric oxide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Stable copper-nitrosyl formation by nitrite reductase in either oxidation state
Biochemistry, 46, 2007
2PP7
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BU of 2pp7 by Molmil
Crystal structure of anaerobically manipulated wild type oxidized AfNiR (acetate bound)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
3MWG
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BU of 3mwg by Molmil
Crystal structure of Staphylococcus aureus SirA
Descriptor: Iron-regulated ABC transporter siderophore-binding protein SirA
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-05-05
Release date:2010-09-01
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Staphylococcus aureus SirA specificity for staphyloferrin B is driven by localized conformational change
To be Published
3MWF
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BU of 3mwf by Molmil
Crystal structure of Staphylococcus aureus SirA complexed with staphyloferrin B
Descriptor: 5-[(2-{[(3S)-5-{[(2S)-2-amino-2-carboxyethyl]amino}-3-carboxy-3-hydroxy-5-oxopentanoyl]amino}ethyl)amino]-2,5-dioxopentanoic acid, FE (III) ION, Iron-regulated ABC transporter siderophore-binding protein SirA
Authors:Grigg, J.C, Murphy, M.E.P.
Deposit date:2010-05-05
Release date:2010-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Staphylococcus aureus SirA specificity for staphyloferrin B is driven by localized conformational change
To be Published
4MP8
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BU of 4mp8 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnB bound to malonate and NAD+
Descriptor: MALONATE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative ornithine cyclodeaminase
Authors:Grigg, J.C, Kobylarz, M.J, Rai, D.K, Murphy, M.E.P.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
2PP8
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BU of 2pp8 by Molmil
Formate bound to oxidized wild type AfNiR
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Eltis, L.D, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
1Y4T
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BU of 1y4t by Molmil
Ferric binding protein from Campylobacter jejuni
Descriptor: FE (III) ION, putative iron-uptake ABC transport system periplasmic iron-binding protein
Authors:Tom-Yew, S.A.L, Cui, D.T, Bekker, E.G, Murphy, M.E.P.
Deposit date:2004-12-01
Release date:2005-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Anion-independent iron coordination by the Campylobacter jejuni ferric binding protein
J.Biol.Chem., 280, 2005
1Y9U
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BU of 1y9u by Molmil
Bordetella ferric binding protein
Descriptor: putative iron binding protein
Authors:Tom-Yew, S.A.L, Cui, D.T, Bekker, E.G, Murphy, M.E.P.
Deposit date:2004-12-16
Release date:2005-01-11
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Anion-independent iron coordination by the Campylobacter jejuni ferric binding protein
J.Biol.Chem., 280, 2005
3QZP
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BU of 3qzp by Molmil
Staphylococcus aureus IsdA NEAT domain in complex with cobalt-protoporphyrin IX
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING CO, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011

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