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PDB: 209 results

1L9S
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BU of 1l9s by Molmil
CRYSTAL STRUCTURE OF THE I257T VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIS S-6
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, NITRITE ION
Authors:Boulanger, M.J, Murphy, M.E.P.
Deposit date:2002-03-26
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Directing the mode of nitrite binding to a copper-containing nitrite reductase from Alcaligenes faecalis S-6: Characterization of an active site isoleucine
PROTEIN SCI., 12, 2003
1L9P
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BU of 1l9p by Molmil
CRYSTAL STRUCTURE OF NITRITE SOAKED I257G VARIANT OF THE COPPER-CONTAINING NITRITE REDUCTASE FROM ALCALIGENES FAECALIES S-6
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, NITRITE ION
Authors:Boulanger, M.J, Murphy, M.E.P.
Deposit date:2002-03-26
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Directing the mode of nitrite binding to a copper-containing nitrite reductase from Alcaligenes faecalis S-6: Characterization of an active site isoleucine
PROTEIN SCI., 12, 2003
3GDC
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BU of 3gdc by Molmil
Crystal structure of multicopper oxidase
Descriptor: CALCIUM ION, COPPER (II) ION, Multicopper oxidase
Authors:MacPherson, I.S, Lee, W.C, Liang, T.I, Murphy, M.E.P.
Deposit date:2009-02-24
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A trimeric multicopper oxidase provides an evolutionary link to nitrite reductase
To be Published
1ET7
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BU of 1et7 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASP MUTANT FROM ALCALIGENES FAECALIS S-6
Descriptor: CADMIUM ION, COPPER (II) ION, NITRITE REDUCTASE
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1ET8
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BU of 1et8 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASN MUTANT FROM ALCALIGENES FAECALIS
Descriptor: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1ET5
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BU of 1et5 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE ASP98ASN MUTANT FROM ALCALIGENES FAECALIS S-6
Descriptor: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
3RTL
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BU of 3rtl by Molmil
Staphylococcus aureus heme-bound IsdB-N2
Descriptor: CHLORIDE ION, Iron-regulated surface determinant protein B, MAGNESIUM ION, ...
Authors:Gaudin, C.F.M, Grigg, J.C, Arrieta, A.L, Murphy, M.E.P.
Deposit date:2011-05-03
Release date:2011-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.453 Å)
Cite:Unique Heme-Iron Coordination by the Hemoglobin Receptor IsdB of Staphylococcus aureus.
Biochemistry, 50, 2011
3RUR
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BU of 3rur by Molmil
Staphylococcus aureus heme-bound selenomethionine-labeled IsdB-N2
Descriptor: Iron-regulated surface determinant protein B, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gaudin, C.F.M, Grigg, J.C, Arrieta, A.L, Murphy, M.E.P.
Deposit date:2011-05-05
Release date:2011-05-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Unique Heme-Iron Coordination by the Hemoglobin Receptor IsdB of Staphylococcus aureus.
Biochemistry, 50, 2011
1B3E
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BU of 1b3e by Molmil
HUMAN SERUM TRANSFERRIN, N-TERMINAL LOBE, EXPRESSED IN PICHIA PASTORIS
Descriptor: CARBONATE ION, FE (III) ION, PROTEIN (SERUM TRANSFERRIN)
Authors:Bewley, M.C, Tam, B.M, Grewal, J, He, S, Shewry, S, Murphy, M.E.P, Mason, A.B, Woodworth, R.C, Baker, E.N, Macgillivray, R.T.A.
Deposit date:1998-12-09
Release date:1999-03-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray crystallography and mass spectroscopy reveal that the N-lobe of human transferrin expressed in Pichia pastoris is folded correctly but is glycosylated on serine-32.
Biochemistry, 38, 1999
2PP8
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BU of 2pp8 by Molmil
Formate bound to oxidized wild type AfNiR
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Eltis, L.D, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
2PPC
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BU of 2ppc by Molmil
Oxidized wild type AfNiR exposed to NO (nitrite bound)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Stable copper-nitrosyl formation by nitrite reductase in either oxidation state.
Biochemistry, 46, 2007
2PPF
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BU of 2ppf by Molmil
Reduced mutant D98N of AfNiR exposed to nitric oxide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Stable copper-nitrosyl formation by nitrite reductase in either oxidation state
Biochemistry, 46, 2007
2PP7
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BU of 2pp7 by Molmil
Crystal structure of anaerobically manipulated wild type oxidized AfNiR (acetate bound)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
2PPA
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BU of 2ppa by Molmil
Anaerobically manipulated wild type oxidized AfNiR bound to nitrous oxide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
3QZM
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BU of 3qzm by Molmil
Staphylococcus aureus IsdA NEAT domain H83A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZO
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BU of 3qzo by Molmil
Staphylococcus aureus IsdA NEAT domain in complex with heme, reduced crystal
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3QZN
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BU of 3qzn by Molmil
Staphylococcus aureus IsdA NEAT domain Y166A variant in complex with heme
Descriptor: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Grigg, J.C, Mao, C.X, Murphy, M.E.P.
Deposit date:2011-03-06
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
3BDG
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BU of 3bdg by Molmil
Crystal structure of wild-type/T155V mixed dimer of E. coli alkaline phosphatase
Descriptor: Alkaline phosphatase, SULFATE ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
3BDF
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BU of 3bdf by Molmil
Crystal structure of metal-free E. coli alkaline phosphatase (T155V)
Descriptor: Alkaline phosphatase, SULFATE ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
2X55
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BU of 2x55 by Molmil
Yersinia Pestis Plasminogen Activator Pla (Native)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN, SULFATE ION
Authors:Eren, E, Murphy, M, Goguen, J, van den Berg, B.
Deposit date:2010-02-05
Release date:2010-07-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis
Structure, 18, 2010
2X56
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BU of 2x56 by Molmil
Yersinia Pestis Plasminogen Activator Pla (Native)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN
Authors:Eren, E, Murphy, M, Goguen, J, van den Berg, B.
Deposit date:2010-02-05
Release date:2010-07-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis
Structure, 18, 2010
5F7A
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BU of 5f7a by Molmil
Nitrite complex structure of copper nitrite reductase from Alcaligenes faecalis determined at 293 K
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION
Authors:Fukuda, Y, Tse, K.M, Nakane, T, Nakatsu, T, Suzuki, M, Sugahara, M, Inoue, S, Masuda, T, Yumoto, F, Matsugaki, N, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Murphy, M.E.P, Inoue, T, Iwata, S, Mizohata, E.
Deposit date:2015-12-07
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography
Proc.Natl.Acad.Sci.USA, 113, 2016
3BDH
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BU of 3bdh by Molmil
Crystal structure of zinc-deficient wild-type E. coli alkaline phosphatase
Descriptor: Alkaline phosphatase, MAGNESIUM ION
Authors:Grigg, J.C, Murphy, M.E.
Deposit date:2007-11-14
Release date:2008-11-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155
To be Published
5F7B
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BU of 5f7b by Molmil
Resting state structure of CuNiR form Alcaligenes faecalis determined at 293 K
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase
Authors:Fukuda, Y, Tse, K.M, Nakane, T, Nakatsu, T, Suzuki, M, Sugahara, M, Inoue, S, Masuda, T, Yumoto, F, Matsugaki, N, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Murphy, M.E.P, Inoue, T, Iwata, S, Mizohata, E.
Deposit date:2015-12-07
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography
Proc.Natl.Acad.Sci.USA, 113, 2016
1A8F
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BU of 1a8f by Molmil
HUMAN SERUM TRANSFERRIN, RECOMBINANT N-TERMINAL LOBE
Descriptor: CARBONATE ION, FE (III) ION, SERUM TRANSFERRIN
Authors:Macgillivray, R.T.A, Moore, S.A, Chen, J, Anderson, B.F, Baker, H, Luo, Y, Bewley, M, Smith, C.A, Murphy, M.E.P, Wang, Y, Mason, A.B, Woodworth, R.C, Brayer, G.D, Baker, E.N.
Deposit date:1998-03-25
Release date:1998-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Two high-resolution crystal structures of the recombinant N-lobe of human transferrin reveal a structural change implicated in iron release.
Biochemistry, 37, 1998

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