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PDB: 214 results

5CFE
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BU of 5cfe by Molmil
Bacillus subtilis AP endonuclease ExoA
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Exodeoxyribonuclease
Authors:Morera, S, Vigouroux, A.
Deposit date:2015-07-08
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Biochimie, 128-129, 2016
6QAK
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BU of 6qak by Molmil
Structure of human ALDH9 in P21212 space group
Descriptor: 1,2-ETHANEDIOL, 4-trimethylaminobutyraldehyde dehydrogenase
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2018-12-19
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
6QAP
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BU of 6qap by Molmil
Structure of the human aldehyde dehydrogenase 9A1 in C2 space group
Descriptor: 1,2-ETHANEDIOL, 4-trimethylaminobutyraldehyde dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2018-12-19
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
6QAO
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BU of 6qao by Molmil
Structure of human aldehyde dehydrogenase 9A1 in P21 space group
Descriptor: 4-trimethylaminobutyraldehyde dehydrogenase, DI(HYDROXYETHYL)ETHER
Authors:Morera, S, Vigouroux, A.
Deposit date:2018-12-19
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
3FJO
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BU of 3fjo by Molmil
Structure of chimeric YH CPR
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADPH-cytochrome P450 reductase
Authors:Morera, S, Aigrain, L, Truan, G.
Deposit date:2008-12-15
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the open conformation of a functional chimeric NADPH cytochrome P450 reductase
Embo Rep., 10, 2009
5CFG
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BU of 5cfg by Molmil
C2 crystal form of APE1 with Mg2+
Descriptor: DNA-(apurinic or apyrimidinic site) lyase, MAGNESIUM ION
Authors:Morera, S, Vigouroux, A.
Deposit date:2015-07-08
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Biochimie, 128-129, 2016
6ZA0
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BU of 6za0 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum (P21212 space group)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZA3
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BU of 6za3 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZAB
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BU of 6zab by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Naretto, A, Vigouroux, A, Legrand, P.
Deposit date:2020-06-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6Z74
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BU of 6z74 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, V.
Deposit date:2020-05-29
Release date:2020-12-02
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZA7
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BU of 6za7 by Molmil
Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
4I8P
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BU of 4i8p by Molmil
Crystal structure of aminoaldehyde dehydrogenase 1a from Zea mays (ZmAMADH1a)
Descriptor: 1,2-ETHANEDIOL, Aminoaldehyde dehydrogenase 1, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2012-12-04
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
4I8Q
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BU of 4i8q by Molmil
Structure of the aminoaldehyde dehydrogenase 1 E260A mutant from Solanum lycopersicum (SlAMADH1-E260A)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2012-12-04
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
4I9B
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BU of 4i9b by Molmil
Structure of aminoaldehyde dehydrogenase 1 from Solanum lycopersium (SlAMADH1) with a thiohemiacetal intermediate
Descriptor: (2-hydroxyethoxy)acetaldehyde, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2012-12-05
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
8CAY
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BU of 8cay by Molmil
PBP AccA from A. tumefaciens Bo542 in complex with Agrocinopine D-like
Descriptor: Agrocinopine D-like (C2-C2 linked; with an alpha and beta-D-glucopyranose), Agrocinopine D-like (C2-C2 linked; with two alpha-D-glucopyranoses), Agrocinopine utilization periplasmic binding protein AccA, ...
Authors:Morera, S, Vigouroux, A, Siragu, S.
Deposit date:2023-01-24
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.626 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
6EPY
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BU of 6epy by Molmil
Structure of the PBP MelB (Atu4661) in complex with raffinose from A.fabrum C58
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Periplasmic alpha-galactoside-binding protein, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2017-10-12
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
8CH1
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BU of 8ch1 by Molmil
PBP AccA from A. vitis S4 in complex with Agrocinopine A
Descriptor: 1,2-ETHANEDIOL, 2-O-phosphono-alpha-L-arabinopyranose, 2-O-phosphono-beta-L-arabinopyranose, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2023-02-06
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.496 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8CKO
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BU of 8cko by Molmil
PBP AccA from A.tumefaciens C58 in complex with agrocinopine C-like
Descriptor: 2-O-phosphono-alpha-D-glucopyranose, 2-O-phosphono-beta-D-glucopyranose, ABC transporter substrate-binding protein, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2023-02-16
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.421 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8CB9
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BU of 8cb9 by Molmil
PBP AccA from A. tumefaciens Bo542 in complex with D-Glucose-2-phosphate
Descriptor: 2-O-phosphono-alpha-D-glucopyranose, 2-O-phosphono-beta-D-glucopyranose, Agrocinopine utilization periplasmic binding protein AccA
Authors:Morera, S, Vigouroux, A.
Deposit date:2023-01-25
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8C6U
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BU of 8c6u by Molmil
PBP AccA-G145YG440Q mutant from A. tumefaciens Bo542 in apoform 4
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Agrocinopine utilization periplasmic binding protein AccA, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2023-01-12
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.843 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8CHC
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BU of 8chc by Molmil
PBP AccA from A. vitis S4 in complex with Agrocinopine D-like
Descriptor: Agrocinopine D-like (C2-C2 linked; with two alpha-D-glucopyranoses), Agrocinopine utilization periplasmic binding protein AccA
Authors:Morera, S, Vigouroux, A, Deicsics, G.
Deposit date:2023-02-07
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.679 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8C75
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BU of 8c75 by Molmil
PBP AccA from A. tumefaciens Bo542 in apoform 3
Descriptor: 1,2-ETHANEDIOL, Agrocinopine utilization periplasmic binding protein AccA, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2023-01-12
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.673 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8CI6
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BU of 8ci6 by Molmil
PBP AccA from A. vitis S4 in complex with D-glucose-2-phosphate (G2P)
Descriptor: 2-O-phosphono-alpha-D-glucopyranose, 2-O-phosphono-beta-D-glucopyranose, ABC transporter substrate binding protein (Agrocinopine)
Authors:Morera, S, Vigouroux, A.
Deposit date:2023-02-08
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8CKE
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BU of 8cke by Molmil
PBP AccA from A.tumefaciens C58 in complex with agrocinopine A in space group I222
Descriptor: 1,2-ETHANEDIOL, 2-O-phosphono-alpha-L-arabinopyranose, 2-O-phosphono-beta-L-arabinopyranose, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2023-02-15
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.298 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
8C6Y
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BU of 8c6y by Molmil
PBP AccA from A. tumefaciens Bo542 in apoform 2
Descriptor: 1,2-ETHANEDIOL, Agrocinopine utilization periplasmic binding protein AccA
Authors:Morera, S, Vigouroux, A, legrand, P.
Deposit date:2023-01-12
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024

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數據於2024-06-12公開中

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