8CAW
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![BU of 8caw by Molmil](/molmil-images/mine/8caw) | PBP AccA from A. tumefaciens Bo542 in complex with agrocin84 | Descriptor: | 1,2-ETHANEDIOL, Agrocinopine utilization periplasmic binding protein AccA, [(2R,3R,4S,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]oxy-N-[9-[(2R,3S,5R)-5-[[[(2R,3S)-4-methyl-2,3-bis(oxidanyl)pentanoyl]amino]-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxolan-2-yl]purin-6-yl]phosphonamidic acid, ... | Authors: | Morera, S, Vigouroux, A, El Sahili, A. | Deposit date: | 2023-01-24 | Release date: | 2024-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.256 Å) | Cite: | A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity. Biochem.J., 481, 2024
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8CDO
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![BU of 8cdo by Molmil](/molmil-images/mine/8cdo) | |
8CKD
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![BU of 8ckd by Molmil](/molmil-images/mine/8ckd) | PBP AccA from A. fabrum C58 in complex with agrocinopine D-like | Descriptor: | 1,2-ETHANEDIOL, ABC transporter substrate-binding protein, Agrocinopine D-like (C2-C2 linked; with an alpha and beta-D-glucopyranose), ... | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2023-02-15 | Release date: | 2024-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity. Biochem.J., 481, 2024
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8CH3
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![BU of 8ch3 by Molmil](/molmil-images/mine/8ch3) | PBP AccA from A. vitis S4 in complex with Agrocinopine C-like | Descriptor: | 2-O-phosphono-alpha-D-glucopyranose, Agrocinopine utilization periplasmic binding protein AccA, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2023-02-06 | Release date: | 2024-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.398 Å) | Cite: | A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity. Biochem.J., 481, 2024
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8C6W
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![BU of 8c6w by Molmil](/molmil-images/mine/8c6w) | PBP AccA from A. tumefaciens Bo542 in apoform 1 | Descriptor: | Agrocinopine utilization periplasmic binding protein AccA | Authors: | Morera, S, Vigouroux, A, Legrand, P. | Deposit date: | 2023-01-12 | Release date: | 2024-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity. Biochem.J., 481, 2024
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8C6R
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![BU of 8c6r by Molmil](/molmil-images/mine/8c6r) | PBP AccA from A. tumefaciens Bo542 in apoform 4 | Descriptor: | 1,2-ETHANEDIOL, Agrocinopine utilization periplasmic binding protein AccA, DI(HYDROXYETHYL)ETHER, ... | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2023-01-12 | Release date: | 2024-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.884 Å) | Cite: | A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity. Biochem.J., 481, 2024
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8CJU
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![BU of 8cju by Molmil](/molmil-images/mine/8cju) | PBP AccA from A. vitis S4 in complex with agrocin84 | Descriptor: | ABC transporter substrate binding protein (Agrocinopine), [(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]oxy-N-[9-[(2R,3S,5R)-5-[[[(2R,3S)-4-methyl-2,3-bis(oxidanyl)pentanoyl]amino]-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxolan-2-yl]purin-6-yl]phosphonamidic acid | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2023-02-13 | Release date: | 2024-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.349 Å) | Cite: | A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity. Biochem.J., 481, 2024
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8CH2
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![BU of 8ch2 by Molmil](/molmil-images/mine/8ch2) | PBP AccA from A. vitis S4 in complex with L-arabinose-2-phosphate (A2P) | Descriptor: | 1,2-ETHANEDIOL, 2-O-phosphono-alpha-L-arabinopyranose, 2-O-phosphono-beta-L-arabinopyranose, ... | Authors: | Morera, S, Deicsics, G, Vigouroux, A. | Deposit date: | 2023-02-06 | Release date: | 2024-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.404 Å) | Cite: | A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity. Biochem.J., 481, 2024
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6TG3
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![BU of 6tg3 by Molmil](/molmil-images/mine/6tg3) | Crystal Structure of the PBP/SBP MotA in complex with glucopinic acid from A. tumefaciens B6/R10 | Descriptor: | (2~{S})-2-[[(3~{S},4~{R},5~{R})-3,4,5,6-tetrakis(oxidanyl)-2-oxidanylidene-hexyl]amino]pentanedioic acid, 1,2-ETHANEDIOL, MotA | Authors: | Morera, S, Vigouroux, S. | Deposit date: | 2019-11-14 | Release date: | 2020-01-22 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches. Biochem.J., 477, 2020
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4EUO
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![BU of 4euo by Molmil](/molmil-images/mine/4euo) | Structure of Atu4243-GABA sensor | Descriptor: | ABC transporter, substrate binding protein (Polyamine), GAMMA-AMINO-BUTANOIC ACID, ... | Authors: | Morera, S, Planamente, S. | Deposit date: | 2012-04-25 | Release date: | 2012-11-21 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.28 Å) | Cite: | Structural basis for selective GABA binding in bacterial pathogens. Mol.Microbiol., 86, 2012
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4EQ7
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![BU of 4eq7 by Molmil](/molmil-images/mine/4eq7) | Structure of Atu4243-GABA receptor | Descriptor: | ABC transporter, substrate binding protein (Polyamine), GLYCEROL, ... | Authors: | Morera, S, Planamente, S. | Deposit date: | 2012-04-18 | Release date: | 2012-11-21 | Last modified: | 2012-12-19 | Method: | X-RAY DIFFRACTION (1.91 Å) | Cite: | Structural basis for selective GABA binding in bacterial pathogens. Mol.Microbiol., 86, 2012
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3IP5
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![BU of 3ip5 by Molmil](/molmil-images/mine/3ip5) | Structure of Atu2422-GABA receptor in complex with alanine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), ALANINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IP7
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![BU of 3ip7 by Molmil](/molmil-images/mine/3ip7) | Structure of Atu2422-GABA receptor in complex with valine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), CALCIUM ION, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IP6
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![BU of 3ip6 by Molmil](/molmil-images/mine/3ip6) | Structure of Atu2422-GABA receptor in complex with proline | Descriptor: | ABC transporter, substrate binding protein (Amino acid), PROLINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IPC
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![BU of 3ipc by Molmil](/molmil-images/mine/3ipc) | Structure of ATU2422-GABA F77A mutant receptor in complex with leucine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), LEUCINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IPA
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![BU of 3ipa by Molmil](/molmil-images/mine/3ipa) | Structure of ATU2422-GABA receptor in complex with alanine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), ALANINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IP9
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![BU of 3ip9 by Molmil](/molmil-images/mine/3ip9) | Structure of Atu2422-GABA receptor in complex with GABA | Descriptor: | ABC transporter, substrate binding protein (Amino acid), GAMMA-AMINO-BUTANOIC ACID, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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5L9P
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![BU of 5l9p by Molmil](/molmil-images/mine/5l9p) | Crystal structure of the PBP MotA from A. tumefaciens B6 | Descriptor: | SULFATE ION, periplasmic binding protein | Authors: | Morera, S, Marty, L. | Deposit date: | 2016-06-10 | Release date: | 2016-09-21 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.54 Å) | Cite: | Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens. J.Biol.Chem., 291, 2016
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4E9E
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![BU of 4e9e by Molmil](/molmil-images/mine/4e9e) | Structure of the glycosylase domain of MBD4 | Descriptor: | Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-21 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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4E9H
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![BU of 4e9h by Molmil](/molmil-images/mine/4e9h) | structure of glycosylase domain of MBD4 bound to 5hmU containing DNA | Descriptor: | DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-21 | Release date: | 2012-08-08 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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4E9G
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![BU of 4e9g by Molmil](/molmil-images/mine/4e9g) | structure of the glycosylase domain of MBD4 bound to thymine containing DNA | Descriptor: | DNA (5'-D(*CP*CP*AP*GP*CP*GP*TP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-21 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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4EA5
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![BU of 4ea5 by Molmil](/molmil-images/mine/4ea5) | Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNA | Descriptor: | DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-22 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.14 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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4E9F
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![BU of 4e9f by Molmil](/molmil-images/mine/4e9f) | Structure of the glycosylase domain of MBD4 bound to AP site containing DNA | Descriptor: | 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*GP*CP*GP*(3DR)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), ... | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-21 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.79 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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4EA4
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![BU of 4ea4 by Molmil](/molmil-images/mine/4ea4) | Structure of the glycosylase domain of MBD4 bound to 5hmU-containing DNA | Descriptor: | DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-22 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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6RU4
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![BU of 6ru4 by Molmil](/molmil-images/mine/6ru4) | |