6ZK4
| Plant nucleoside hydrolase - ZmNRh2b with a bound adenine | Descriptor: | 1,2-ETHANEDIOL, ADENINE, CALCIUM ION, ... | Authors: | Morera, S, Vigouroux, A, Kopecny, D. | Deposit date: | 2020-06-29 | Release date: | 2022-01-12 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization. Plant J., 2023
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6ZK5
| Plant nucleoside hydrolase - ZmNRh3 enzyme in complex with forodesine | Descriptor: | 1,2-ETHANEDIOL, 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, ... | Authors: | Morera, S, Vigouroux, A, Kopecny, D. | Deposit date: | 2020-06-29 | Release date: | 2022-01-12 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization. Plant J., 2023
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4KPO
| Plant nucleoside hydrolase - ZmNRh3 enzyme | Descriptor: | CALCIUM ION, Nucleoside N-ribohydrolase 3 | Authors: | Morera, S, Vigouroux, A, Kopecny, D. | Deposit date: | 2013-05-14 | Release date: | 2013-11-27 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.49 Å) | Cite: | Structure and Function of Nucleoside Hydrolases from Physcomitrella patens and Maize Catalyzing the Hydrolysis of Purine, Pyrimidine, and Cytokinin Ribosides. Plant Physiol., 163, 2013
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4MLA
| Structure of maize cytokinin oxidase/dehydrogenase 2 (ZmCKO2) | Descriptor: | 1,2-ETHANEDIOL, Cytokinin oxidase 2, FLAVIN-ADENINE DINUCLEOTIDE, ... | Authors: | Morera, S, Kopecny, D, Briozzo, P, Koncitikova, R. | Deposit date: | 2013-09-06 | Release date: | 2015-03-11 | Last modified: | 2016-03-23 | Method: | X-RAY DIFFRACTION (2.04 Å) | Cite: | Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site. Febs J., 283, 2016
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4ML8
| Structure of maize cytokinin oxidase/dehydrogenase 2 (ZmCKO2) | Descriptor: | Cytokinin oxidase 2, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE | Authors: | Morera, S, Kopecny, D, Briozzo, P, Koncitikova, R. | Deposit date: | 2013-09-06 | Release date: | 2015-03-11 | Last modified: | 2016-03-23 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site. Febs J., 283, 2016
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3FKB
| Structure of NDPK H122G and tenofovir-diphosphate | Descriptor: | 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ... | Authors: | Morera, S, Chen, Y.X. | Deposit date: | 2008-12-16 | Release date: | 2009-09-29 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Nucleoside diphosphate kinase and the activation of antiviral phosphonate analogs of nucleotides: binding mode and phosphorylation of tenofovir derivatives Nucleosides Nucleotides Nucleic Acids, 28, 2009
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3IP5
| Structure of Atu2422-GABA receptor in complex with alanine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), ALANINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IP7
| Structure of Atu2422-GABA receptor in complex with valine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), CALCIUM ION, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IP6
| Structure of Atu2422-GABA receptor in complex with proline | Descriptor: | ABC transporter, substrate binding protein (Amino acid), PROLINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IPC
| Structure of ATU2422-GABA F77A mutant receptor in complex with leucine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), LEUCINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IPA
| Structure of ATU2422-GABA receptor in complex with alanine | Descriptor: | ABC transporter, substrate binding protein (Amino acid), ALANINE, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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3IP9
| Structure of Atu2422-GABA receptor in complex with GABA | Descriptor: | ABC transporter, substrate binding protein (Amino acid), GAMMA-AMINO-BUTANOIC ACID, ... | Authors: | Morera, S, Planamente, S, Vigouroux, A. | Deposit date: | 2009-08-17 | Release date: | 2010-07-14 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | A conserved mechanism of GABA binding and antagonism is revealed by structure-function analysis of the periplasmic binding protein Atu2422 in Agrobacterium tumefaciens. J.Biol.Chem., 285, 2010
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6ZA0
| Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum (P21212 space group) | Descriptor: | 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ... | Authors: | Morera, S, Vigouroux, A, Legrand, P. | Deposit date: | 2020-06-04 | Release date: | 2020-12-02 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
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6ZA3
| Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group) | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... | Authors: | Morera, S, Vigouroux, A, Legrand, P. | Deposit date: | 2020-06-04 | Release date: | 2020-12-02 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
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6ZAB
| Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group) | Descriptor: | 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ... | Authors: | Morera, S, Naretto, A, Vigouroux, A, Legrand, P. | Deposit date: | 2020-06-05 | Release date: | 2020-12-02 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
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6ZA7
| Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum | Descriptor: | DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ... | Authors: | Morera, S, Vigouroux, A, Legrand, P. | Deposit date: | 2020-06-04 | Release date: | 2020-12-02 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.34 Å) | Cite: | Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
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6Z74
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4EUO
| Structure of Atu4243-GABA sensor | Descriptor: | ABC transporter, substrate binding protein (Polyamine), GAMMA-AMINO-BUTANOIC ACID, ... | Authors: | Morera, S, Planamente, S. | Deposit date: | 2012-04-25 | Release date: | 2012-11-21 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.28 Å) | Cite: | Structural basis for selective GABA binding in bacterial pathogens. Mol.Microbiol., 86, 2012
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4EQ7
| Structure of Atu4243-GABA receptor | Descriptor: | ABC transporter, substrate binding protein (Polyamine), GLYCEROL, ... | Authors: | Morera, S, Planamente, S. | Deposit date: | 2012-04-18 | Release date: | 2012-11-21 | Last modified: | 2012-12-19 | Method: | X-RAY DIFFRACTION (1.91 Å) | Cite: | Structural basis for selective GABA binding in bacterial pathogens. Mol.Microbiol., 86, 2012
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5L9P
| Crystal structure of the PBP MotA from A. tumefaciens B6 | Descriptor: | SULFATE ION, periplasmic binding protein | Authors: | Morera, S, Marty, L. | Deposit date: | 2016-06-10 | Release date: | 2016-09-21 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.54 Å) | Cite: | Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens. J.Biol.Chem., 291, 2016
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4E9E
| Structure of the glycosylase domain of MBD4 | Descriptor: | Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-21 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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4E9H
| structure of glycosylase domain of MBD4 bound to 5hmU containing DNA | Descriptor: | DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-21 | Release date: | 2012-08-08 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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3FJO
| Structure of chimeric YH CPR | Descriptor: | FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADPH-cytochrome P450 reductase | Authors: | Morera, S, Aigrain, L, Truan, G. | Deposit date: | 2008-12-15 | Release date: | 2009-06-16 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structure of the open conformation of a functional chimeric NADPH cytochrome P450 reductase Embo Rep., 10, 2009
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4EA5
| Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNA | Descriptor: | DNA (5'-D(*CP*CP*AP*GP*CP*GP*(5HU)*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-22 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.14 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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4E9G
| structure of the glycosylase domain of MBD4 bound to thymine containing DNA | Descriptor: | DNA (5'-D(*CP*CP*AP*GP*CP*GP*TP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), Methyl-CpG-binding domain protein 4 | Authors: | Morera, S, Vigouroux, A. | Deposit date: | 2012-03-21 | Release date: | 2012-08-08 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA. Nucleic Acids Res., 40, 2012
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