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PDB: 214 件

6TG2
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BU of 6tg2 by Molmil
Structure of the PBP/SBP MotA in complex with mannopinic acid from A.tumefacien R10
分子名称: (2~{R})-2-[[(3~{R},4~{R},5~{S})-3,4,5,6-tetrakis(oxidanyl)-2-oxidanylidene-hexyl]amino]pentanedioic acid, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Morera, S, Marty, L.
登録日2019-11-14
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches.
Biochem.J., 477, 2020
6TFS
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BU of 6tfs by Molmil
Structure in P3212 form of the PBP/SBP MoaA in complex with glucopinic acid from A.tumefacien R10
分子名称: (2~{S})-2-[[(3~{S},4~{R},5~{R})-3,4,5,6-tetrakis(oxidanyl)-2-oxidanylidene-hexyl]amino]pentanedioic acid, ABC transporter substrate-binding protein, CHLORIDE ION, ...
著者Morera, S, Vigouroux, A.
登録日2019-11-14
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches.
Biochem.J., 477, 2020
6TFX
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BU of 6tfx by Molmil
Structure in P21 form of the PBP/SBP MoaA in complex with mannopinic acid from A.tumefacien R10
分子名称: (2~{R})-2-[[(3~{R},4~{R},5~{S})-3,4,5,6-tetrakis(oxidanyl)-2-oxidanylidene-hexyl]amino]pentanedioic acid, 1,2-ETHANEDIOL, ABC transporter substrate-binding protein, ...
著者Morera, S, Vigouroux, A.
登録日2019-11-14
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches.
Biochem.J., 477, 2020
6TFQ
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BU of 6tfq by Molmil
Structure in P3212 form of the PBP/SBP MoaA in complex with mannopinic acid from A.tumefacien R10
分子名称: (2~{R})-2-[[(3~{R},4~{R},5~{S})-3,4,5,6-tetrakis(oxidanyl)-2-oxidanylidene-hexyl]amino]pentanedioic acid, ABC transporter substrate-binding protein, CHLORIDE ION, ...
著者Morera, S, Vigouroux, A.
登録日2019-11-14
公開日2020-01-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches.
Biochem.J., 477, 2020
4PP0
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BU of 4pp0 by Molmil
Structure of the PBP NocT-M117N in complex with pyronopaline
分子名称: 1,2-ETHANEDIOL, 1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline, DI(HYDROXYETHYL)ETHER, ...
著者Morera, S, Vigouroux, A.
登録日2014-02-26
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
4POW
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BU of 4pow by Molmil
Structure of the PBP NocT in complex with pyronopaline
分子名称: 1,2-ETHANEDIOL, 1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline, Nopaline-binding periplasmic protein
著者Morera, S, Vigouroux, A.
登録日2014-02-26
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
6HLY
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BU of 6hly by Molmil
Structure in P212121 form of the PBP AgtB in complex with agropinic acid from A.tumefacien R10
分子名称: 1,2-ETHANEDIOL, Agropine permease, agropinic acid
著者Morera, S, Marty, L, Vigouroux, A.
登録日2018-09-11
公開日2018-12-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
6HLZ
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BU of 6hlz by Molmil
Structure in C2 form of the PBP AgtB from A.tumefacien R10 in complex with agropinic acid
分子名称: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Agropine permease, ...
著者Morera, S, Marty, L, Vigouroux, A.
登録日2018-09-11
公開日2018-12-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
6HM2
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BU of 6hm2 by Molmil
Structure in P1 form of the PBP AgtB in complex with agropinic acid from A.tumefacien R10
分子名称: 1,2-ETHANEDIOL, Agropine permease, SODIUM ION, ...
著者Morera, S, Marty, L, Vigouroux, A.
登録日2018-09-12
公開日2018-12-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
6HLX
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BU of 6hlx by Molmil
Structure of the PBP AgaA in complex with agropinic acid from A.tumefacien R10
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, ...
著者Morera, S, Marty, L, Vigouroux, A.
登録日2018-09-11
公開日2018-12-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
6I7W
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BU of 6i7w by Molmil
Structure of the periplasmic binding protein (PBP) AccA in complex with 2-glucose-2-O-lactic acid phosphate (G2LP) from Agrobacterium fabrum C58
分子名称: 2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-alpha-D-glucopyranose, 2-O-[(R)-{[(2S)-1,1-dihydroxypropan-2-yl]oxy}(hydroxy)phosphoryl]-beta-D-glucopyranose, ABC transporter, ...
著者Morera, S, Vigouroux, A, El Sahili, A.
登録日2018-11-19
公開日2019-01-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthesis of a non-natural glucose-2-phosphate ester able to dupe the acc system of Agrobacterium fabrum.
Org. Biomol. Chem., 17, 2019
6HQH
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BU of 6hqh by Molmil
Structure of Agrobacterium tumefaciens B6 strain PBP SocA complexed with Deoxyfructosylglutamine (DFG) at 1.8 A resolution
分子名称: 1,2-ETHANEDIOL, Deoxyfructosylglutamine, Membrane-bound lytic murein transglycosylase F
著者Morera, S, Marty, L.
登録日2018-09-25
公開日2018-10-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens.
J.Biol.Chem., 291, 2016
4K1G
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BU of 4k1g by Molmil
Structure of E. coli Nfo(Endo IV)-H69A mutant bound to a cleaved DNA duplex containing a alphadA:T basepair
分子名称: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*GP*TP*CP*GP*TP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*CP*C)-3'), ...
著者Morera, S, Vigouroux, A.
登録日2013-04-05
公開日2013-07-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insight into mechanisms of 3'-5' exonuclease activity and removal of bulky 8,5'-cyclopurine adducts by apurinic/apyrimidinic endonucleases.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KPO
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BU of 4kpo by Molmil
Plant nucleoside hydrolase - ZmNRh3 enzyme
分子名称: CALCIUM ION, Nucleoside N-ribohydrolase 3
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2013-05-14
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure and Function of Nucleoside Hydrolases from Physcomitrella patens and Maize Catalyzing the Hydrolysis of Purine, Pyrimidine, and Cytokinin Ribosides.
Plant Physiol., 163, 2013
4KPN
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BU of 4kpn by Molmil
Plant nucleoside hydrolase - PpNRh1 enzyme
分子名称: CALCIUM ION, Nucleoside N-ribohydrolase 1
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2013-05-14
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structure and Function of Nucleoside Hydrolases from Physcomitrella patens and Maize Catalyzing the Hydrolysis of Purine, Pyrimidine, and Cytokinin Ribosides.
Plant Physiol., 163, 2013
4MLA
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BU of 4mla by Molmil
Structure of maize cytokinin oxidase/dehydrogenase 2 (ZmCKO2)
分子名称: 1,2-ETHANEDIOL, Cytokinin oxidase 2, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Morera, S, Kopecny, D, Briozzo, P, Koncitikova, R.
登録日2013-09-06
公開日2015-03-11
最終更新日2016-03-23
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site.
Febs J., 283, 2016
4ML8
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BU of 4ml8 by Molmil
Structure of maize cytokinin oxidase/dehydrogenase 2 (ZmCKO2)
分子名称: Cytokinin oxidase 2, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE
著者Morera, S, Kopecny, D, Briozzo, P, Koncitikova, R.
登録日2013-09-06
公開日2015-03-11
最終更新日2016-03-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site.
Febs J., 283, 2016
3RX7
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BU of 3rx7 by Molmil
Structure of AaCel9A in complex with cellotetraose-like isofagomine
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside, (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranoside, CALCIUM ION, ...
著者Morera, S.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Fortuitious binding of inhibitors-derived isofagomine for inverting GH9 beta-glycosidases
Org.Biomol.Chem., 9, 2011
3RX8
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structure of AaCel9A in complex with cellobiose-like isofagomine
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
著者Morera, S.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Fortuitious binding of inhibitors-derived isofagomine for inverting GH9 beta-glycosidases
Org.Biomol.Chem., 9, 2011
3RX5
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BU of 3rx5 by Molmil
structure of AaCel9A in complex with cellotriose-like isofagomine
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl 4-O-beta-D-glucopyranosyl-beta-D-glucopyranoside, CALCIUM ION, Cellulase, ...
著者Morera, S, Vigouroux, A.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献A fortuitous binding of inhibitors-derived isofagomine for inverting GH9 beta-glycosidase
Org.Biomol.Chem., 9, 2011
1C3J
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BU of 1c3j by Molmil
T4 PHAGE BETA-GLUCOSYLTRANSFERASE: SUBSTRATE BINDING AND PROPOSED CATALYTIC MECHANISM
分子名称: BETA-GLUCOSYLTRANSFERASE, URIDINE-5'-DIPHOSPHATE
著者Morera, S, Imberty, A, Aschke-Sonnenborn, U, Ruger, W, Freemont, P.S.
登録日1999-07-28
公開日1999-08-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献T4 phage beta-glucosyltransferase: substrate binding and proposed catalytic mechanism.
J.Mol.Biol., 292, 1999
3H2W
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BU of 3h2w by Molmil
Structure of A. acidocaldarius cellulase CelA in complex with cellobiose
分子名称: CALCIUM ION, COBALT (II) ION, Cellulase, ...
著者Morera, S, Vigouroux, A.
登録日2009-04-14
公開日2009-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Crystal structures of A. acidocaldarius endoglucanase Cel9A in complex with Cello-oligosaccharides: strong -1 and -2 subsites mimic cellobiohydrolase activity
J.Mol.Biol., 394, 2009
3H3K
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BU of 3h3k by Molmil
Structure of A. acidocaldarius cellulase CelA in complex with cellotetraose
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Cellulase, ...
著者Morera, S, Eckert, K.
登録日2009-04-16
公開日2009-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of A. acidocaldarius endoglucanase Cel9A in complex with Cello-oligosaccharides: strong -1 and -2 subsites mimic cellobiohydrolase activity
J.Mol.Biol., 394, 2009
3GZK
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BU of 3gzk by Molmil
Structure of A. Acidocaldarius Cellulase CelA
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Cellulase, ...
著者Morera, S, Eckert, K, Vigouroux, A.
登録日2009-04-07
公開日2009-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of A. acidocaldarius endoglucanase Cel9A in complex with cello-oligosaccharides: strong -1 and -2 subsites mimic cellobiohydrolase activity
J.Mol.Biol., 394, 2009
4PXL
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BU of 4pxl by Molmil
Structure of Zm ALDH2-3 (RF2C) in complex with NAD
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cytosolic aldehyde dehydrogenase RF2C, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2014-03-24
公開日2015-03-18
最終更新日2015-05-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.
Biochem.J., 468, 2015

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件を2024-06-12に公開中

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