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PDB: 167 件
2Z30
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BU of 2z30 by Molmil
Crystal structure of complex form between mat-Tk-subtilisin and Tk-propeptide
分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-29
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
J.Mol.Biol., 372, 2007
2Z56
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BU of 2z56 by Molmil
Crystal structure of G56S-propeptide:S324A-subtilisin complex
分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION
著者Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-06-29
公開日2008-01-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses
J.Mol.Biol., 374, 2007
2Z2Z
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BU of 2z2z by Molmil
Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2
分子名称: CALCIUM ION, Tk-subtilisin precursor
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-29
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
J.Mol.Biol., 372, 2007
2ZCT
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BU of 2zct by Molmil
Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
分子名称: Probable peroxiredoxin
著者Nakamura, T, Hagihara, Y, Abe, M, Inoue, T, Yamamoto, T, Matsumura, H.
登録日2007-11-12
公開日2008-05-27
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2Z2X
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BU of 2z2x by Molmil
Crystal structure of mature form of Tk-subtilisin
分子名称: CALCIUM ION, Tk-subtilisin
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-29
公開日2007-12-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
J.Mol.Biol., 372, 2007
3A3P
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BU of 3a3p by Molmil
Crystal structure of complex between E201A/SA-subtilisin and Tk-propeptide
分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
J.Mol.Biol., 394, 2009
3A2X
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BU of 3a2x by Molmil
Peroxiredoxin (C50S) from Aeropyrum pernix K1 (acetate-bound form)
分子名称: ACETATE ION, Probable peroxiredoxin
著者Nakamura, T, Kado, Y, Yamaguchi, F, Matsumura, H, Ishikawa, K, Inoue, T.
登録日2009-06-04
公開日2009-10-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3A3O
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BU of 3a3o by Molmil
Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the five C-terminal residues
分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
J.Mol.Biol., 394, 2009
3A2W
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BU of 3a2w by Molmil
Peroxiredoxin (C50S) from Aeropytum pernix K1 (peroxide-bound form)
分子名称: GLYCEROL, PEROXIDE ION, Probable peroxiredoxin
著者Nakamura, T, Kado, Y, Yamaguchi, F, Matsumura, H, Ishikawa, K, Inoue, T.
登録日2009-06-04
公開日2009-10-27
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3A6Z
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BU of 3a6z by Molmil
Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer
分子名称: CALCIUM ION, Lipase
著者Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2009-09-10
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids
J.Mol.Biol., 2010
3WVM
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BU of 3wvm by Molmil
The 0.88 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid
分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Matsumura, H, Murakami, S, Inoue, T, Murata, M.
登録日2014-05-25
公開日2015-01-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein.
Angew.Chem.Int.Ed.Engl., 54, 2015
1WSI
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BU of 1wsi by Molmil
Crystal structure of E.coli RNase HI active site mutant (E48A/K87A/D134N)
分子名称: Ribonuclease HI
著者Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S.
登録日2004-11-07
公開日2004-11-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献

1WSJ
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BU of 1wsj by Molmil
Crystal structure of E.coli RNase HI active site mutant (K87A/H124A)
分子名称: Ribonuclease HI
著者Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S.
登録日2004-11-07
公開日2004-11-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献

1WSH
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BU of 1wsh by Molmil
Crystal structure of E.coli RNase HI active site mutant (E48A/K87A)
分子名称: Ribonuclease HI
著者Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S.
登録日2004-11-07
公開日2004-11-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献

2CWR
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BU of 2cwr by Molmil
Crystal structure of chitin biding domain of chitinase from Pyrococcus furiosus
分子名称: chitinase
著者Uegaki, K, Nakamura, T, Ishikawa, K, Matsumura, H.
登録日2005-06-24
公開日2006-07-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Tertiary structure and carbohydrate recognition by the chitin-binding domain of a hyperthermophilic chitinase from Pyrococcus furiosus.
J.Mol.Biol., 381, 2008
2CZN
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BU of 2czn by Molmil
Solution structure of the chitin-binding domain of hyperthermophilic chitinase from pyrococcus furiosus
分子名称: chitinase
著者Uegaki, T, Ikegami, T, Nakamura, T, Hagihara, Y, Mine, S, Inoue, T, Matsumura, H, Ataka, M, Ishikawa, K.
登録日2005-07-13
公開日2006-07-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Tertiary structure and carbohydrate recognition by the chitin-binding domain of a hyperthermophilic chitinase from Pyrococcus furiosus.
J.Mol.Biol., 381, 2008
3VHQ
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BU of 3vhq by Molmil
Crystal structure of the Ca6 site mutant of Pro-SA-subtilisin
分子名称: CALCIUM ION, Tk-subtilisin
著者Uehara, R, Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2011-09-01
公開日2012-07-11
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Requirement of Ca(2+) Ions for the Hyperthermostability of Tk-Subtilisin from Thermococcus kodakarensis
Biochemistry, 51, 2012

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件を2024-08-21に公開中

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