8HMM
 
 | | Crystal structure of AoRhaA | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Bac_rhamnosid6H domain-containing protein | | Authors: | Makabe, K, Koseki, T. | | Deposit date: | 2022-12-05 | | Release date: | 2023-12-06 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Aspergillus oryzae alpha-l-rhamnosidase: Crystal structure and insight into the substrate specificity.
Proteins, 92, 2024
|
|
7X2B
 | | Red fluorescent protein from Diadumene lineata | | Descriptor: | Red fluorescent protein, SULFATE ION | | Authors: | Makabe, K, Hotta, J, Mizuno, H. | | Deposit date: | 2022-02-25 | | Release date: | 2023-03-01 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.63 Å) | | Cite: | Cloning and structural basis of fluorescent protein color variants from identical species of sea anemone, Diadumene lineata.
Photochem Photobiol Sci, 22, 2023
|
|
3AUM
 | | Crystal structure of OspA mutant | | Descriptor: | Outer surface protein A | | Authors: | Makabe, K. | | Deposit date: | 2011-02-10 | | Release date: | 2012-02-15 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
|
|
1WT5
 | | The Crystal Structure Of A Humanized Antibody Fv 528 | | Descriptor: | ANTI EGFR ANTIBODY FV REGION | | Authors: | Makabe, K, Tsumoto, K, Asano, R, Kondo, H, Kumagai, I. | | Deposit date: | 2004-11-16 | | Release date: | 2005-05-16 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Thermodynamic consequences of mutations in vernier zone residues of a humanized anti-human epidermal growth factor receptor murine antibody, 528
J.Biol.Chem., 283, 2008
|
|
2AF5
 | | 2.5A X-ray Structure of Engineered OspA protein | | Descriptor: | Engineered Outer Surface Protein A (OspA) with the inserted two beta-hairpins | | Authors: | Makabe, K, Mcelheny, D, Tereshko, V, Hilyard, A, Koide, A, Koide, S. | | Deposit date: | 2005-07-25 | | Release date: | 2006-08-01 | | Last modified: | 2023-08-23 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
|
|
5AYP
 | |
2OL7
 | | The crystal structure of OspA mutant | | Descriptor: | Outer surface protein A | | Authors: | Makabe, K, Terechko, V, Koide, S. | | Deposit date: | 2007-01-18 | | Release date: | 2007-12-11 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.35 Å) | | Cite: | beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
|
|
2OL6
 | | The crystal structure of OspA mutant | | Descriptor: | Outer surface protein A | | Authors: | Makabe, K, Terechko, V, Koide, S. | | Deposit date: | 2007-01-18 | | Release date: | 2007-12-11 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
|
|
2OL8
 | | The crystal structure of OspA mutant | | Descriptor: | Outer surface protein A | | Authors: | Makabe, K, Terechko, V, Koide, S. | | Deposit date: | 2007-01-18 | | Release date: | 2007-12-11 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
|
|
2OY1
 | | The crystal structure of OspA mutant | | Descriptor: | Outer surface protein A | | Authors: | Makabe, K, Terechko, V, Koide, S. | | Deposit date: | 2007-02-21 | | Release date: | 2007-12-11 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.86 Å) | | Cite: | beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
|
|
2OY5
 | | The crystal structure of OspA mutant | | Descriptor: | Outer surface protein A | | Authors: | Makabe, K, Terechko, V, Biancalana, M, Yan, S, Koide, S. | | Deposit date: | 2007-02-21 | | Release date: | 2008-03-04 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
|
|
2OY8
 | |
2OY7
 | |
2OYB
 | |
2FKG
 | | The Crystal Structure of Engineered OspA | | Descriptor: | Outer Surface Protein A | | Authors: | Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S. | | Deposit date: | 2006-01-04 | | Release date: | 2006-11-21 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
|
|
2G8C
 | |
2HKD
 | |
2FKJ
 | | The crystal structure of engineered OspA | | Descriptor: | Outer Surface Protein A | | Authors: | Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S. | | Deposit date: | 2006-01-04 | | Release date: | 2006-11-21 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
|
|
2I5V
 | | Crystal structure of OspA mutant | | Descriptor: | Outer surface protein A, TETRAETHYLENE GLYCOL | | Authors: | Makabe, K, Terechko, V, Koide, S. | | Deposit date: | 2006-08-25 | | Release date: | 2007-12-25 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.1 Å) | | Cite: | High-Resolution Structure of a Self-Assembly-Competent Form of a Hydrophobic Peptide Captured in a Soluble β-Sheet Scaffold.
J.Mol.Biol., 378, 2008
|
|
2I5Z
 | | The crystal structure of OspA mutant | | Descriptor: | Outer surface protein A, TETRAETHYLENE GLYCOL | | Authors: | Makabe, K, Terechko, V, Koide, S. | | Deposit date: | 2006-08-26 | | Release date: | 2007-07-10 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.2 Å) | | Cite: | Hydrophobic surface burial is the major stability determinant of a flat, single-layer beta-sheet.
J.Mol.Biol., 368, 2007
|
|
3B0I
 | | Crystal structure of recombinant human alpha lactalbumin | | Descriptor: | Alpha-lactalbumin, CALCIUM ION, SULFATE ION | | Authors: | Makabe, K. | | Deposit date: | 2011-06-10 | | Release date: | 2012-06-13 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
|
|
3B0K
 | | Crystal structure of alpha-lactalbumin | | Descriptor: | Alpha-lactalbumin, CALCIUM ION | | Authors: | Makabe, K. | | Deposit date: | 2011-06-10 | | Release date: | 2012-06-13 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
|
|
3B0O
 | | Crystal structure of alpha-lactalbumin | | Descriptor: | Alpha-lactalbumin, CALCIUM ION | | Authors: | Makabe, K, Kuwajima, K. | | Deposit date: | 2011-06-10 | | Release date: | 2012-06-13 | | Last modified: | 2024-10-30 | | Method: | X-RAY DIFFRACTION (1.61 Å) | | Cite: | Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
|
|
3CKA
 | | The crystal structure of OspA mutant | | Descriptor: | Outer surface protein A, PENTAETHYLENE GLYCOL | | Authors: | Makabe, K, Biancalana, M, Terechko, V, Koide, S. | | Deposit date: | 2008-03-14 | | Release date: | 2009-03-17 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.65 Å) | | Cite: | Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
|
|
3CKG
 | | The crystal structure of OspA deletion mutant | | Descriptor: | MAGNESIUM ION, Outer surface protein A | | Authors: | Makabe, K, Koide, S. | | Deposit date: | 2008-03-14 | | Release date: | 2009-01-27 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
|
|
