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PDB: 70 件
3EEX
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BU of 3eex by Molmil
The crystal structure of OspA mutant
分子名称: HEXAETHYLENE GLYCOL, Outer Surface Protein A
著者Makabe, K, Biancalana, M, Koide, S.
登録日2008-09-06
公開日2009-09-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
3CH8
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BU of 3ch8 by Molmil
The crystal structure of PDZ-Fibronectin fusion protein
分子名称: C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin
著者Makabe, K, Huang, J, Koide, A, Koide, S.
登録日2008-03-08
公開日2009-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
3CKF
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BU of 3ckf by Molmil
The crystal structure of OspA deletion mutant
分子名称: Outer surface protein A
著者Makabe, K, Koide, S.
登録日2008-03-14
公開日2009-01-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
6J48
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BU of 6j48 by Molmil
Glycine mutation on single layer beta-sheet of OspAsm1
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J47
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BU of 6j47 by Molmil
OspA variant with a short chameleon sequence from alpha B crystallin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J49
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BU of 6j49 by Molmil
Grafting VLADV sequence into OspAsm1
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6LA0
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BU of 6la0 by Molmil
Crystal structure of AoRut
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoside hydrolase family 5
著者Koseki, T, Makabe, K.
登録日2019-11-11
公開日2020-11-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Aspergillus oryzae Rutinosidase: Biochemical and Structural Investigation.
Appl.Environ.Microbiol., 87, 2021
5B2A
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BU of 5b2a by Molmil
Crystal structure of a mutant of OspA
分子名称: Outer surface protein A
著者Hori , Y, Makabe, K.
登録日2016-01-13
公開日2017-01-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
2QBW
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BU of 2qbw by Molmil
The crystal structure of PDZ-Fibronectin fusion protein
分子名称: PDZ-Fibronectin fusion protein, Polypeptide
著者Huang, J, Makabe, K, Koide, A, Koide, S.
登録日2007-06-18
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Design of protein function leaps by directed domain interface evolution.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2PI3
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BU of 2pi3 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Biancalana, M, Makabe, K, Terechko, V, Koide, S.
登録日2007-04-12
公開日2008-05-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
7FAO
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BU of 7fao by Molmil
Top7 surface mutant K42A Q43A K46A K57S K58S, and I68R
分子名称: MAGNESIUM ION, Top7 Surface mutant
著者Ito, Y, Makabe, K.
登録日2021-07-07
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Surface Engineering of Top7 to Facilitate Structure Determination.
Int J Mol Sci, 23, 2022
7FDD
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BU of 7fdd by Molmil
A Crystal structure of OspA mutant
分子名称: DI(HYDROXYETHYL)ETHER, Outer surface protein A
著者Shiga, S, Makabe, K.
登録日2021-07-16
公開日2022-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献beta-Strand-mediated Domain-swapping in the Absence of Hydrophobic Core Repacking.
J.Mol.Biol., 436, 2024
7FJR
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BU of 7fjr by Molmil
Structure of a mutant of OspA
分子名称: DI(HYDROXYETHYL)ETHER, Outer surface protein A
著者Shiga, S, Makabe, K.
登録日2021-08-04
公開日2022-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献beta-Strand-mediated Domain-swapping in the Absence of Hydrophobic Core Repacking.
J.Mol.Biol., 436, 2024
5ZRU
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BU of 5zru by Molmil
Crystal structure of Agl-KA catalytic domain
分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Alpha-1,3-glucanase, CALCIUM ION, ...
著者Yano, S, Makabe, K.
登録日2018-04-25
公開日2019-10-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.833 Å)
主引用文献Crystal structure of the catalytic unit of GH 87-type alpha-1,3-glucanase Agl-KA from Bacillus circulans.
Sci Rep, 9, 2019
5YS7
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BU of 5ys7 by Molmil
Crystal structure of an OspA mutant
分子名称: Outer Surface Protein A
著者Takada, S, Makabe, K.
登録日2017-11-13
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an OspA mutant
To Be Published
5Z1O
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BU of 5z1o by Molmil
Crystal structure of an OspA mutant
分子名称: Outer Surface Protein A
著者Takada, S, Makabe, K.
登録日2017-12-27
公開日2019-01-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of an OspA mutant.
To Be Published
6AIS
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BU of 6ais by Molmil
Loop deletion mutant (deleting two residues)
分子名称: Outer surface protein A
著者Shiga, S, Makabe, K.
登録日2018-08-24
公開日2019-07-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Domain-Swapping Design by Polyproline Rod Insertion.
Chembiochem, 20, 2019
3EC5
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BU of 3ec5 by Molmil
The crystal structure of Thioflavin-T (ThT) binding OspA mutant
分子名称: Outer Surface Protein A, TETRAETHYLENE GLYCOL
著者Biancalana, M, Makabe, K, Koide, A, Koide, S.
登録日2008-08-28
公開日2009-02-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular mechanism of thioflavin-T binding to the surface of beta-rich peptide self-assemblies
J.Mol.Biol., 385, 2009
6J6C
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BU of 6j6c by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form3)
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-14
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5N
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BU of 6j5n by Molmil
OspA mutant, PSAM-VLGDV1-form4, grafted short chameleon sequence from alpha-B crystallin
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-11
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5M
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BU of 6j5m by Molmil
OspA mutant, PSAM-VLGDV1-form3, grafted short chameleon sequence from alpha-B crystallin
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-11
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5Q
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BU of 6j5q by Molmil
OspA mutant, PSAM-VLGDV1-form7, grafted short chameleon sequence from alpha-B crystallin
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-11
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J6E
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BU of 6j6e by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form5)
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-14
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5O
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BU of 6j5o by Molmil
OspA mutant, PSAM-VLGDV1-form5, grafted short chameleon sequence from alpha-B crystallin
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-11
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J6B
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BU of 6j6b by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form2)
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-14
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019

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