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PDB: 70 件
8HMM
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BU of 8hmm by Molmil
Crystal structure of AoRhaA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bac_rhamnosid6H domain-containing protein
著者Makabe, K, Koseki, T.
登録日2022-12-05
公開日2023-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Aspergillus oryzae alpha-l-rhamnosidase: Crystal structure and insight into the substrate specificity.
Proteins, 92, 2024
2I5Z
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BU of 2i5z by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Terechko, V, Koide, S.
登録日2006-08-26
公開日2007-07-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Hydrophobic surface burial is the major stability determinant of a flat, single-layer beta-sheet.
J.Mol.Biol., 368, 2007
3EEX
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BU of 3eex by Molmil
The crystal structure of OspA mutant
分子名称: HEXAETHYLENE GLYCOL, Outer Surface Protein A
著者Makabe, K, Biancalana, M, Koide, S.
登録日2008-09-06
公開日2009-09-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
7X2B
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BU of 7x2b by Molmil
Red fluorescent protein from Diadumene lineata
分子名称: Red fluorescent protein, SULFATE ION
著者Makabe, K, Hotta, J, Mizuno, H.
登録日2022-02-25
公開日2023-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Cloning and structural basis of fluorescent protein color variants from identical species of sea anemone, Diadumene lineata.
Photochem Photobiol Sci, 22, 2023
1WT5
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BU of 1wt5 by Molmil
The Crystal Structure Of A Humanized Antibody Fv 528
分子名称: ANTI EGFR ANTIBODY FV REGION
著者Makabe, K, Tsumoto, K, Asano, R, Kondo, H, Kumagai, I.
登録日2004-11-16
公開日2005-05-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Thermodynamic consequences of mutations in vernier zone residues of a humanized anti-human epidermal growth factor receptor murine antibody, 528
J.Biol.Chem., 283, 2008
2AF5
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BU of 2af5 by Molmil
2.5A X-ray Structure of Engineered OspA protein
分子名称: Engineered Outer Surface Protein A (OspA) with the inserted two beta-hairpins
著者Makabe, K, Mcelheny, D, Tereshko, V, Hilyard, A, Koide, A, Koide, S.
登録日2005-07-25
公開日2006-08-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5AYP
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BU of 5ayp by Molmil
Crystal structure of Bacillus stearothermophilus Farnesyl pyrophosphate synthase
分子名称: Farnesyl diphosphate synthase
著者Makabe, K, Kijima, T.
登録日2015-08-26
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal structure of Bacillus stearothermophilus Farnesyl pyrophosphate synthase
To Be Published
6J48
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BU of 6j48 by Molmil
Glycine mutation on single layer beta-sheet of OspAsm1
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J47
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BU of 6j47 by Molmil
OspA variant with a short chameleon sequence from alpha B crystallin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
2FKG
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BU of 2fkg by Molmil
The Crystal Structure of Engineered OspA
分子名称: Outer Surface Protein A
著者Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
登録日2006-01-04
公開日2006-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3B0O
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BU of 3b0o by Molmil
Crystal structure of alpha-lactalbumin
分子名称: Alpha-lactalbumin, CALCIUM ION
著者Makabe, K, Kuwajima, K.
登録日2011-06-10
公開日2012-06-13
最終更新日2014-01-15
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
2G8C
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BU of 2g8c by Molmil
Atomic-resolution crystal structure of Borrelia burgdorferi OspA via surface entropy reduction
分子名称: IMIDAZOLE, TETRAETHYLENE GLYCOL, outer surface protein A
著者Makabe, K, Tereshko, V, Koide, S.
登録日2006-03-02
公開日2006-08-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Atomic-resolution crystal structure of Borrelia burgdorferi outer surface protein A via surface engineering.
Protein Sci., 15, 2006
2FKJ
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BU of 2fkj by Molmil
The crystal structure of engineered OspA
分子名称: Outer Surface Protein A
著者Makabe, K, Terechko, V, Gawlak, G, Yan, S, Koide, S.
登録日2006-01-04
公開日2006-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2HKD
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BU of 2hkd by Molmil
The crystal structure of engineered OSPA
分子名称: Outer Surface Protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Terechko, V, Koide, S.
登録日2006-07-03
公開日2006-11-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic structures of peptide self-assembly mimics.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I5V
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BU of 2i5v by Molmil
Crystal structure of OspA mutant
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Terechko, V, Koide, S.
登録日2006-08-25
公開日2007-12-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-Resolution Structure of a Self-Assembly-Competent Form of a Hydrophobic Peptide Captured in a Soluble β-Sheet Scaffold.
J.Mol.Biol., 378, 2008
3B0K
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BU of 3b0k by Molmil
Crystal structure of alpha-lactalbumin
分子名称: Alpha-lactalbumin, CALCIUM ION
著者Makabe, K.
登録日2011-06-10
公開日2012-06-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
3B0I
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BU of 3b0i by Molmil
Crystal structure of recombinant human alpha lactalbumin
分子名称: Alpha-lactalbumin, CALCIUM ION, SULFATE ION
著者Makabe, K.
登録日2011-06-10
公開日2012-06-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the stability perturbations induced by N-terminal variation in human and goat alpha-lactalbumin
Protein Eng.Des.Sel., 26, 2013
3CKA
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BU of 3cka by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A, PENTAETHYLENE GLYCOL
著者Makabe, K, Biancalana, M, Terechko, V, Koide, S.
登録日2008-03-14
公開日2009-03-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
2OY1
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BU of 2oy1 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, S.
登録日2007-02-21
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OY5
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BU of 2oy5 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Biancalana, M, Yan, S, Koide, S.
登録日2007-02-21
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
2OY8
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BU of 2oy8 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, A, Koide, S.
登録日2007-02-21
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
2OY7
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BU of 2oy7 by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Terechko, V, Koide, A, Koide, S.
登録日2007-02-21
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
2OYB
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BU of 2oyb by Molmil
The crystal structure of OspA mutant
分子名称: Outer surface protein A
著者Makabe, K, Biancalana, M, Terechko, V, Koide, S.
登録日2007-02-21
公開日2008-03-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
3CH8
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BU of 3ch8 by Molmil
The crystal structure of PDZ-Fibronectin fusion protein
分子名称: C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin
著者Makabe, K, Huang, J, Koide, A, Koide, S.
登録日2008-03-08
公開日2009-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
3CKF
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BU of 3ckf by Molmil
The crystal structure of OspA deletion mutant
分子名称: Outer surface protein A
著者Makabe, K, Koide, S.
登録日2008-03-14
公開日2009-01-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008

 

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