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PDB: 70 results

2MWD
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BU of 2mwd by Molmil
NMR structure of FBP28 WW2 mutant Y438R DNDC
Descriptor: Transcription elongation regulator 1
Authors:Macias, M.J, Scheraga, H, Sunol, D, Todorovski, T.
Deposit date:2014-11-04
Release date:2014-12-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Folding kinetics of WW domains with the united residue force field for bridging microscopic motions and experimental measurements.
Proc.Natl.Acad.Sci.USA, 111, 2014
6ZMU
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BU of 6zmu by Molmil
Crystal structure of the germline-specific thioredoxin protein Deadhead (Thioredoxin-1) from Drospohila melanogaster, P43212
Descriptor: SODIUM ION, SULFATE ION, Thioredoxin-1
Authors:Baginski, B, Pluta, R, Macias, M.J.
Deposit date:2020-07-03
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of the germline-specific Deadhead and thioredoxin T proteins from Drosophila melanogaster reveal unique features among thioredoxins.
Iucrj, 8, 2021
6ZMN
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BU of 6zmn by Molmil
Crystal structure of the Smad3-Smad5 MH1 domain chimera bound to the GGCGC site
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*GP*CP*GP*CP*CP*TP*GP*CP*A)-3'), ...
Authors:Pluta, R, Macias, M.J.
Deposit date:2020-07-03
Release date:2020-08-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.333 Å)
Cite:Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes.
Comput Struct Biotechnol J, 19, 2021
7PVU
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BU of 7pvu by Molmil
Crystal structure of p38alpha C162S in complex with CAS2094511-69-8, P 1 21 1
Descriptor: Mitogen-activated protein kinase 14, N-(2-cyclobutyl-1H-1,3-benzodiazol-5-yl)-2-fluorobenzene-1-sulfonamide
Authors:Baginski, B, Pous, J, Gonzalez, L, Macias, M.J, Nebreda, A.R.
Deposit date:2021-10-05
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:Characterization of p38 alpha autophosphorylation inhibitors that target the non-canonical activation pathway.
Nat Commun, 14, 2023
2B7E
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BU of 2b7e by Molmil
First FF domain of Prp40 Yeast Protein
Descriptor: Pre-mRNA processing protein PRP40
Authors:Gasch, A, Wiesner, S, Martin-Malpartida, P, Ramirez-Espain, X, Ruiz, L, Macias, M.J.
Deposit date:2005-10-04
Release date:2005-11-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of Prp40 FF1 domain and its interaction with the crn-TPR1 motif of Clf1 gives a new insight into the binding mode of FF domains.
J.Biol.Chem., 281, 2006
1MPH
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BU of 1mph by Molmil
PLECKSTRIN HOMOLOGY DOMAIN FROM MOUSE BETA-SPECTRIN, NMR, 50 STRUCTURES
Descriptor: BETA SPECTRIN
Authors:Nilges, M, Macias, M.J, O'Donoghue, S.I, Oschkinat, H.
Deposit date:1997-04-23
Release date:1997-06-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin.
J.Mol.Biol., 269, 1997
8ACO
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BU of 8aco by Molmil
Crystal structure of WT p38alpha
Descriptor: 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE, MAGNESIUM ION, Mitogen-activated protein kinase 14
Authors:Pous, J, Baginski, B, Gonzalez, L, Macias, M.J, Nebreda, A.R.
Deposit date:2022-07-05
Release date:2023-11-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of WT p38alpha
Res Sq
8ACM
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BU of 8acm by Molmil
Crystal structure of WT p38alpha
Descriptor: 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE, MAGNESIUM ION, Mitogen-activated protein kinase 14
Authors:Pous, J, Baginski, B, Gonzalez, L, Macias, M.J, Nebreda, A.R.
Deposit date:2022-07-05
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of WT p38alpha
Res Sq
2RM0
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BU of 2rm0 by Molmil
FBP28WW2 domain in complex with a PPPLIPPPP peptide
Descriptor: Formin-1, Transcription elongation regulator 1
Authors:Ramirez-Espain, X, Ruiz, L, Martin-Malpartida, P, Oschkinat, H, Macias, M.J.
Deposit date:2007-09-06
Release date:2007-11-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of a New Binding Motif and a Novel Binding Mode in Group 2 WW Domains
J.Mol.Biol., 373, 2007
2RLY
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BU of 2rly by Molmil
FBP28WW2 domain in complex with PTPPPLPP peptide
Descriptor: Formin-1, Transcription elongation regulator 1
Authors:Ramirez-Espain, X, Ruiz, L, Martin-Malpartida, P, Oschkinat, H, Macias, M.J.
Deposit date:2007-09-03
Release date:2007-11-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of a New Binding Motif and a Novel Binding Mode in Group 2 WW Domains
J.Mol.Biol., 373, 2007
1W4M
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BU of 1w4m by Molmil
Structure of the human pleckstrin DEP domain by multidimensional NMR
Descriptor: PLECKSTRIN
Authors:Civera, C, Simon, B, Stier, G, Sattler, M, Macias, M.J.
Deposit date:2004-07-26
Release date:2004-12-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Dynamics of the Human Pleckstrin Dep Domain: Distinct Molecular Features of a Novel Dep Domain Subfamily
Proteins: Struct.,Funct., Genet., 58, 2005
1YIU
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BU of 1yiu by Molmil
Itch E3 ubiquitin ligase WW3 domain
Descriptor: Itchy E3 ubiquitin protein ligase
Authors:Shaw, A.Z, Martin-Malpartida, P, Morales, B, Yraola, F, Royo, M, Macias, M.J.
Deposit date:2005-01-13
Release date:2005-08-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Phosphorylation of either Ser16 or Thr30 does not disrupt the structure of the Itch E3 ubiquitin ligase third WW domain
Proteins, 60, 2005
6TBZ
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BU of 6tbz by Molmil
Crystal structure of the MH1 domain of Smad5-Smad3 chimera construct bound to the GGCGC site
Descriptor: DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*GP*CP*GP*CP*CP*TP*GP*CP*A)-3'), Mothers against decapentaplegic homolog 5, ZINC ION
Authors:Pluta, R, Macias, M.J.
Deposit date:2019-11-04
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes.
Comput Struct Biotechnol J, 19, 2021
6TCE
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BU of 6tce by Molmil
Crystal structure of the GGCT site-bound MH1 domain of Smad5 containing a GGGS insertion in the Loop1
Descriptor: DNA (5'-D(P*TP*GP*CP*AP*GP*GP*CP*TP*AP*GP*CP*CP*TP*GP*CP*A)-3'), Mothers against decapentaplegic homolog 5, ZINC ION
Authors:Pluta, R, Macias, M.J.
Deposit date:2019-11-05
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Unveiling the dimer/monomer propensities of Smad MH1-DNA complexes.
Comput Struct Biotechnol J, 19, 2021
1O6W
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BU of 1o6w by Molmil
Solution Structure of the Prp40 WW Domain Pair of the Yeast Splicing Factor Prp40
Descriptor: PRE-MRNA PROCESSING PROTEIN PRP40
Authors:Wiesner, S, Stier, G, Sattler, M, Macias, M.J.
Deposit date:2002-10-16
Release date:2002-12-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure and Ligand Recognition of the Ww Domain Pair of the Yeast Splicing Factor Prp40
J.Mol.Biol., 324, 2002
1JMQ
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BU of 1jmq by Molmil
YAP65 (L30K mutant) WW domain in Complex with GTPPPPYTVG peptide
Descriptor: 65 KDA YES-ASSOCIATED PROTEIN, WW Domain Binding Protein-1
Authors:Pires, J.R, Taha-Nejad, F, Toepert, F, Ast, T, Hoffmuller, U, Schneider-Mergener, J, Kuhne, R, Macias, M.J, Oschkinat, H.
Deposit date:2001-07-19
Release date:2001-12-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of the YAP65 WW domain and the variant L30 K in complex with the peptides GTPPPPYTVG, N-(n-octyl)-GPPPY and PLPPY and the application of peptide libraries reveal a minimal binding epitope.
J.Mol.Biol., 314, 2001
1K9Q
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BU of 1k9q by Molmil
YAP65 WW domain complexed to N-(n-octyl)-GPPPY-NH2
Descriptor: 65 kDa Yes-associated protein, N-OCTANE, WW domain binding protein-1
Authors:Pires, J.R, Taha-Nejad, F, Toepert, F, Ast, T, Hoffmuller, U, Schneider-Mergener, J, Kuhne, R, Macias, M.J, Oschkinat, H.
Deposit date:2001-10-30
Release date:2001-12-28
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution structures of the YAP65 WW domain and the variant L30 K in complex with the peptides GTPPPPYTVG, N-(n-octyl)-GPPPY and PLPPY and the application of peptide libraries reveal a minimal binding epitope.
J.Mol.Biol., 314, 2001
1K9R
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BU of 1k9r by Molmil
YAP65 WW domain complexed to Acetyl-PLPPY
Descriptor: 65 kDa Yes-associated protein, WW domain binding protein-1
Authors:Pires, J.R, Taha-Nejad, F, Toepert, F, Ast, T, Hoffmuller, U, Schneider-Mergener, J, Kuhne, R, Macias, M.J, Oschkinat, H.
Deposit date:2001-10-30
Release date:2001-12-28
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution structures of the YAP65 WW domain and the variant L30 K in complex with the peptides GTPPPPYTVG, N-(n-octyl)-GPPPY and PLPPY and the application of peptide libraries reveal a minimal binding epitope.
J.Mol.Biol., 314, 2001
1D8B
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BU of 1d8b by Molmil
NMR STRUCTURE OF THE HRDC DOMAIN FROM SACCHAROMYCES CEREVISIAE RECQ HELICASE
Descriptor: SGS1 RECQ HELICASE
Authors:Liu, Z, Macias, M.J, Bottomley, M.J, Stier, G, Linge, J.P, Nilges, M, Bork, P, Sattler, M.
Deposit date:1999-10-21
Release date:2000-01-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The three-dimensional structure of the HRDC domain and implications for the Werner and Bloom syndrome proteins.
Structure Fold.Des., 7, 1999
7YZA
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BU of 7yza by Molmil
Crystal structure of the zebrafish FoxH1 bound to the TGTGTATT site
Descriptor: DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*GP*TP*AP*TP*TP*GP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*AP*AP*TP*AP*CP*AP*CP*AP*AP*TP*CP*T)-3'), Forkhead box protein H1, ...
Authors:Pluta, R, Macias, M.J.
Deposit date:2022-02-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
7YZ7
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BU of 7yz7 by Molmil
Crystal structure of the zebrafish FoxH1 bound to the TGTGGATT site
Descriptor: DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*GP*GP*AP*TP*TP*GP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*AP*AP*TP*CP*CP*AP*CP*AP*AP*TP*CP*T)-3'), Forkhead box protein H1, ...
Authors:Pluta, R, Macias, M.J.
Deposit date:2022-02-18
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
7YZB
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BU of 7yzb by Molmil
Crystal structure of the human FoxH1 bound to the TGTGGATT site
Descriptor: DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*GP*GP*AP*TP*TP*GP*CP*GP*A)-3'), DNA (5'-D(*TP*CP*GP*CP*AP*AP*TP*CP*CP*AP*CP*AP*AP*TP*CP*T)-3'), Forkhead box protein H1, ...
Authors:Pluta, R, Macias, M.J.
Deposit date:2022-02-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
7YZD
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BU of 7yzd by Molmil
Crystal structure of the zebrafish FoxH1 bound to the TGTTTACT site (fkh motif GTAAACA)
Descriptor: ACETATE ION, DNA (5'-D(*TP*CP*TP*CP*AP*GP*TP*AP*AP*AP*CP*AP*AP*TP*CP*T)-3'), DNA (5'-D(P*AP*GP*AP*TP*TP*GP*TP*TP*TP*AP*CP*TP*GP*AP*GP*A)-3'), ...
Authors:Pluta, R, Macias, M.J.
Deposit date:2022-02-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
7YZC
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BU of 7yzc by Molmil
Crystal structure of the zebrafish FoxH1 bound to the TGTTTATT site
Descriptor: ACETATE ION, DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*TP*TP*AP*TP*TP*GP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*AP*AP*TP*AP*AP*AP*CP*AP*AP*TP*CP*T)-3'), ...
Authors:Pluta, R, Macias, M.J.
Deposit date:2022-02-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
7YZG
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BU of 7yzg by Molmil
Crystal structure of the Xenopus FoxH1 bound to the TGTGGATT site
Descriptor: DNA (5'-D(*CP*AP*GP*AP*TP*TP*GP*TP*GP*GP*AP*TP*TP*GP*AP*G)-3'), DNA (5'-D(*CP*TP*CP*AP*AP*TP*CP*CP*AP*CP*AP*AP*TP*CP*TP*G)-3'), Forkhead box protein H1
Authors:Pluta, R, Macias, M.J.
Deposit date:2022-02-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022

226707

數據於2024-10-30公開中

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