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PDB: 51689 results

5VKA
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Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and N-omega-hydroxy-L-arginine
Descriptor: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, MANGANESE (II) ION, ...
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2017-04-21
Release date:2017-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.169 Å)
Cite:Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
5VLC
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BU of 5vlc by Molmil
Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with L-Histidinol
Descriptor: Histidinol dehydrogenase, chloroplastic, L-histidinol, ...
Authors:Ruszkowski, M, Dauter, Z.
Deposit date:2017-04-25
Release date:2017-09-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structures of Medicago truncatula L-Histidinol Dehydrogenase Show Rearrangements Required for NAD(+) Binding and the Cofactor Positioned to Accept a Hydride.
Sci Rep, 7, 2017
5FEI
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BU of 5fei by Molmil
Crystal structure of the bacteriophage phi29 tail knob protein gp9 truncation variant
Descriptor: DI(HYDROXYETHYL)ETHER, Distal tube protein
Authors:Xu, J.W, Gui, M, Wang, D.H, Xiang, Y.
Deposit date:2015-12-17
Release date:2016-06-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:The bacteriophage 29 tail possesses a pore-forming loop for cell membrane penetration.
Nature, 534, 2016
5KUA
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BU of 5kua by Molmil
Cryo-EM reconstruction of Neisseria meningitidis Type IV pilus
Descriptor: pilin
Authors:Kolappan, S, Coureuil, M, Yu, X, Nassif, X, Craig, L, Egelman, E.H.
Deposit date:2016-07-13
Release date:2016-10-12
Last modified:2016-11-30
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Structure of the Neisseria meningitidis Type IV pilus.
Nat Commun, 7, 2016
5KVC
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BU of 5kvc by Molmil
Thermostable mutant of halohydrin dehalogenase (HheC)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Halohydrin dehalogenase, ...
Authors:Dal Lago, M, Terwisscha van Scheltinga, A.C.
Deposit date:2016-07-14
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:A robust cosolvent-compatible halohydrin dehalogenase by computational library design.
Protein Eng. Des. Sel., 30, 2017
5KVP
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BU of 5kvp by Molmil
Solution structure of the catalytic domain of zoocin A
Descriptor: UNKNOWN LIGAND, ZINC ION, Zoocin A endopeptidase
Authors:Timkovich, R, Xing, M, Simmonds, R.S.
Deposit date:2016-07-15
Release date:2016-10-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the Cys74 to Ala74 mutant of the recombinant catalytic domain of Zoocin A.
Proteins, 85, 2017
1BE1
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BU of 1be1 by Molmil
GLUTAMATE MUTASE (B12-BINDING SUBUNIT), NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: GLUTAMATE MUTASE
Authors:Tollinger, M, Konrat, R, Hilbert, B.H, Marsh, E.N.G, Kraeutler, B.
Deposit date:1998-05-19
Release date:1998-08-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:How a protein prepares for B12 binding: structure and dynamics of the B12-binding subunit of glutamate mutase from Clostridium tetanomorphum
Structure, 6, 1998
1AP4
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BU of 1ap4 by Molmil
REGULATORY DOMAIN OF HUMAN CARDIAC TROPONIN C IN THE CALCIUM-SATURATED STATE, NMR, 40 STRUCTURES
Descriptor: CALCIUM ION, CARDIAC N-TROPONIN C
Authors:Li, M.X, Spyracopoulos, L, Sia, S.K, Gagne, S.M, Chandra, M, Solaro, R.J, Sykes, B.D.
Deposit date:1997-07-24
Release date:1998-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Calcium-induced structural transition in the regulatory domain of human cardiac troponin C.
Biochemistry, 36, 1997
5G2T
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BU of 5g2t by Molmil
BT1596 in complex with its substrate 4,5 unsaturated uronic acid alpha 1,4 D-Glucosamine-2-N, 6-O-disulfate
Descriptor: 1,2-ETHANEDIOL, 2-O GLYCOSAMINOGLYCAN SULFATASE, 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid, ...
Authors:Cartmell, A, Lowe, E.C, Basle, A, Crouch, L.I, Czjzek, M, Turnbull, J, Henrissat, B, Terrapon, N, Thomas, S, Murray, H, Firbank, S.J, Bolam, D.N.
Deposit date:2016-04-13
Release date:2017-05-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5VNU
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BU of 5vnu by Molmil
Nonheme Iron Replacement in a Biosynthetic Nitric Oxide Reductase Model Performing O2 Reduction to Water: Mn-bound FeBMb
Descriptor: MANGANESE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Reed, J, Shi, Y, Zhu, Q, Chakraborty, S, Mirs, E.N, Petrik, I.D, Bhagi-Damodaran, A, Ross, M, Moenne-Loccoz, P, Zhang, Y, Lu, Y.
Deposit date:2017-05-01
Release date:2017-08-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.584 Å)
Cite:Manganese and Cobalt in the Nonheme-Metal-Binding Site of a Biosynthetic Model of Heme-Copper Oxidase Superfamily Confer Oxidase Activity through Redox-Inactive Mechanism.
J. Am. Chem. Soc., 139, 2017
4K7B
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BU of 4k7b by Molmil
Crystal structure of Extrinsic protein in photosystem II
Descriptor: Extrinsic protein in photosystem II, GLYCEROL, SULFATE ION
Authors:Nagao, R, Suga, M, Niikura, A, Okumura, A, Koua, F.H.M, Suzuki, T, Tomo, T, Enami, I, Shen, J.R.
Deposit date:2013-04-16
Release date:2013-09-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Psb31, a Novel Extrinsic Protein of Photosystem II from a Marine Centric Diatom and Implications for Its Binding and Function
Biochemistry, 52, 2013
5D8Y
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BU of 5d8y by Molmil
2.05A resolution structure of iron bound BfrB (L68A E81A) from Pseudomonas aeruginosa
Descriptor: ACETATE ION, FE (II) ION, Ferroxidase, ...
Authors:Lovell, S, Battaile, K.P, Wang, Y, Yao, H, Rivera, M.
Deposit date:2015-08-18
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Characterization of the Bacterioferritin/Bacterioferritin Associated Ferredoxin Protein-Protein Interaction in Solution and Determination of Binding Energy Hot Spots.
Biochemistry, 54, 2015
5VEH
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BU of 5veh by Molmil
Re-refinement OF THE PDB STRUCTURE 1yiz of Aedes aegypti kynurenine aminotransferase
Descriptor: BROMIDE ION, GLYCEROL, Kynurenine aminotransferase
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-04
Release date:2017-11-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5G2Y
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BU of 5g2y by Molmil
Structure a of Group II Intron Complexed with its Reverse Transcriptase
Descriptor: GROUP II INTRON
Authors:Qu, G, Kaushal, P.S, Wang, J, Shigematsu, H, Piazza, C.L, Agrawal, R.K, Belfort, M, Wang, H.W.
Deposit date:2016-04-16
Release date:2016-05-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of a Group II Intron in Complex with its Reverse Transcriptase.
Nat.Struct.Mol.Biol., 23, 2016
3C2T
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BU of 3c2t by Molmil
Evolution of chlorella virus dUTPase
Descriptor: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
Authors:Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
Deposit date:2008-01-25
Release date:2009-02-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
5VGL
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BU of 5vgl by Molmil
Crystal structure of lachrymatory factor synthase from Allium cepa
Descriptor: Lachrymatory-factor synthase
Authors:Silvaroli, J.A, Pleshinger, M.J, Banerjee, S, Kiser, P.D, Golczak, M.
Deposit date:2017-04-11
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Enzyme That Makes You Cry-Crystal Structure of Lachrymatory Factor Synthase from Allium cepa.
ACS Chem. Biol., 12, 2017
5GHE
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BU of 5ghe by Molmil
Crystal Structure of Bacillus thuringiensis Cry6Aa2 Protoxin
Descriptor: Pesticidal crystal protein Cry6Aa
Authors:Huang, J, Guan, Z, Zou, T, Sun, M, Yin, P.
Deposit date:2016-06-19
Release date:2016-08-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Crystal structure of Cry6Aa: A novel nematicidal ClyA-type alpha-pore-forming toxin from Bacillus thuringiensis
Biochem.Biophys.Res.Commun., 478, 2016
1AWW
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BU of 1aww by Molmil
SH3 DOMAIN FROM BRUTON'S TYROSINE KINASE, NMR, 42 STRUCTURES
Descriptor: BRUTON'S TYROSINE KINASE
Authors:Hansson, H, Mattsson, P.T, Allard, P, Haapaniemi, P, Vihinen, M, Smith, C.I.E, Hard, T.
Deposit date:1997-10-06
Release date:1998-04-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain from Bruton's tyrosine kinase.
Biochemistry, 37, 1998
5VH2
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BU of 5vh2 by Molmil
Crystal Structure of Mouse Cadherin-23 EC12-13 with Engineered Mutation S1339D
Descriptor: CALCIUM ION, Cadherin-23, SODIUM ION
Authors:Termine, D.J, Jaiganesh, A, Sotomayor, M.
Deposit date:2017-04-12
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
1AWZ
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BU of 1awz by Molmil
3D SOLUTION STRUCTURE OF HUMAN ANGIOGENIN DETERMINED BY 1H, 15N NMR SPECTROSCOPY, 30 STRUCTURES
Descriptor: ANGIOGENIN
Authors:Lequin, O, Thuring, H, Robin, M, Lallemand, J.-Y.
Deposit date:1997-10-07
Release date:1998-02-25
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of human angiogenin determined by 1H,15N-NMR spectroscopy--characterization of histidine protonation states and pKa values.
Eur.J.Biochem., 250, 1997
5VIF
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BU of 5vif by Molmil
Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase
Descriptor: 2-{[(2E)-4-chlorobut-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose, CKII, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit, ...
Authors:Jiang, J, Li, B, Hu, C.-W, Worth, M, Fan, D, Li, H.
Deposit date:2017-04-15
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase.
Nat. Chem. Biol., 13, 2017
1B4G
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BU of 1b4g by Molmil
CONTROL OF K+ CHANNEL GATING BY PROTEIN PHOSPHORYLATION: STRUCTURAL SWITCHES OF THE INACTIVATION GATE, NMR, 22 STRUCTURES
Descriptor: POTASSIUM CHANNEL
Authors:Antz, C, Bauer, T, Kalbacher, H, Frank, R, Covarrubias, M, Kalbitzer, H.R, Ruppersberg, J.P, Baukrowitz, T, Fakler, B.
Deposit date:1998-12-22
Release date:1999-04-27
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Control of K+ channel gating by protein phosphorylation: structural switches of the inactivation gate.
Nat.Struct.Biol., 6, 1999
4NIW
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BU of 4niw by Molmil
Crystal structure of trypsiligase (K60E/N143H/Y151H/D189K trypsin) orthorhombic form
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL
Authors:Schoepfel, M, Parthier, C, Stubbs, M.T.
Deposit date:2013-11-08
Release date:2014-02-19
Last modified:2014-03-19
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:N-terminal protein modification by substrate-activated reverse proteolysis.
Angew.Chem.Int.Ed.Engl., 53, 2014
5L5Q
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BU of 5l5q by Molmil
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone 18
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2016-05-28
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
5KJ4
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BU of 5kj4 by Molmil
Crystal Structure of Mouse Protocadherin-15 EC9-10
Descriptor: CALCIUM ION, Protocadherin-15
Authors:Araya-Secchi, R, Sotomayor, M.
Deposit date:2016-06-17
Release date:2016-11-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:An elastic element in the protocadherin-15 tip link of the inner ear.
Nat Commun, 7, 2016

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數據於2024-09-04公開中

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