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PDB: 51938 results

2DPF
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Crystal Structure of curculin1 homodimer
Descriptor: Curculin, SULFATE ION
Authors:Kurimoto, E, Suzuki, M, Amemiya, E, Yamaguchi, Y, Nirasawa, S, Shimba, N, Xu, N, Kashiwagi, T, Kawai, M, Suzuki, E, Kato, K.
Deposit date:2006-05-11
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Curculin Exhibits Sweet-tasting and Taste-modifying Activities through Its Distinct Molecular Surfaces.
J.Biol.Chem., 282, 2007
2DB1
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BU of 2db1 by Molmil
Solution structure of the RNA binding domain in heterogeneous nuclear ribonucleoprotein F homolog
Descriptor: heterogeneous nuclear ribonucleoprotein F
Authors:Abe, C, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-14
Release date:2006-06-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in heterogeneous nuclear ribonucleoprotein F homolog
To be Published
2DB9
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BU of 2db9 by Molmil
Solution structure of the plus-3 domain of human KIAA0252 protein
Descriptor: Paf1/RNA polymerase II complex component
Authors:Yoneyama, M, Kigawa, T, Tochio, N, Nameki, N, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-06-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the plus-3 domain of human KIAA0252 protein
To be Published
2DBY
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BU of 2dby by Molmil
Crystal structure of the GTP-binding protein YchF in complexed with GDP
Descriptor: FORMIC ACID, GTP-binding protein, GUANOSINE-5'-DIPHOSPHATE
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-16
Release date:2006-06-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of the GTP-binding protein YchF in complexed with GDP
To be Published
2DBM
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BU of 2dbm by Molmil
Solution structures of the SH3 domain of human SH3-containing GRB2-like protein 2
Descriptor: SH3-containing GRB2-like protein 2
Authors:Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-12-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the SH3 domain of human SH3-containing GRB2-like protein 2
To be Published
2DBJ
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BU of 2dbj by Molmil
Solution structures of the fn3 domain of human Proto-oncogene tyrosine-protein kinase MER precursor
Descriptor: Proto-oncogene tyrosine-protein kinase MER precursor
Authors:Sato, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-12-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the fn3 domain of human Proto-oncogene tyrosine-protein kinase MER precursor
To be Published
2DH8
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BU of 2dh8 by Molmil
Solution structure of the N-terminal RNA binding domain in DAZ-associated protein 1
Descriptor: DAZ-associated protein 1
Authors:Arai, S, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-23
Release date:2006-09-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal RNA binding domain in DAZ-associated protein 1
To be Published
2DIV
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BU of 2div by Molmil
Solution structure of the RRM domain of TRNA selenocysteine associated protein
Descriptor: TRNA selenocysteine associated protein
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-30
Release date:2006-09-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RRM domain of TRNA selenocysteine associated protein
To be Published
2DKZ
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BU of 2dkz by Molmil
Solution structure of the SAM_PNT-domain of the hypothetical protein LOC64762
Descriptor: hypothetical protein LOC64762
Authors:Goroncy, A.K, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-14
Release date:2006-10-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SAM_PNT-domain of the hypothetical protein LOC64762
To be Published
1ZHN
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BU of 1zhn by Molmil
Crystal Structure of mouse CD1d bound to the self ligand phosphatidylcholine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-[(DODECANOYLOXY)METHYL]-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-3,5,8-TRIOXA-4-PHOSPHADOTRIACONTAN-1-AMINIUM 4-OXIDE, CD1d1 antigen, ...
Authors:Giabbai, B, Sidobre, S, Crispin, M.M.D, Sanchez Ruiz, Y, Bachi, A, Kronenberg, M, Wilson, I.A, Degano, M.
Deposit date:2005-04-26
Release date:2005-07-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of mouse CD1d bound to the self ligand phosphatidylcholine: a molecular basis for NKT cell activation
J.Immunol., 175, 2005
1YW0
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BU of 1yw0 by Molmil
Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.
Descriptor: MAGNESIUM ION, tryptophan 2,3-dioxygenase
Authors:Vorobiev, S.M, Abashidze, M, Forouhar, F, Kuzin, A, Xiao, R, Ciano, M, Aton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-02-16
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.
To be Published
1Z3J
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BU of 1z3j by Molmil
Solution Structure of MMP12 in the presence of N-isobutyl-N-4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
Authors:Bertini, I, Calderone, V, Cosenza, M, Fragai, M, Lee, Y.M, Luchinat, C, Mangani, S, Terni, B, Turano, P.
Deposit date:2005-03-13
Release date:2005-04-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conformational variability of matrix metalloproteinases: Beyond a single 3D structure.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Z91
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BU of 1z91 by Molmil
x-ray crystal structure of apo-OhrRC15S in reduced form: MarR family protein
Descriptor: Organic hydroperoxide resistance transcriptional regulator
Authors:Hong, M, Fuangthong, M, Helmann, J.D, Brennan, R.G.
Deposit date:2005-03-31
Release date:2005-10-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family.
Mol.Cell, 20, 2005
2AI9
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BU of 2ai9 by Molmil
S.aureus Polypeptide Deformylase
Descriptor: NICKEL (II) ION, Peptide deformylase, SULFATE ION
Authors:Smith, K.J, Petit, C.M, Aubart, K, Smyth, M, McManus, E, Jones, J, Fosberry, A, Lewis, C, Lonetto, M, Christensen, S.B.
Deposit date:2005-07-29
Release date:2005-09-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Variation and inhibitor binding in polypeptide deformylase from four different bacterial species.
Protein Sci., 12, 2003
2AXP
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BU of 2axp by Molmil
X-Ray Crystal Structure of Protein BSU20280 from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR256.
Descriptor: hypothetical protein BSU20280
Authors:Forouhar, F, Abashidze, M, Friedman, D, Vorobiev, S.M, Kuzin, A.P, Ciao, M, Conover, K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-09-05
Release date:2005-09-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Hypothetical Protein BSU20280 from Bacillus subtilis, NESG target SR256
To be Published
2AXB
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BU of 2axb by Molmil
Crystal Structure Analysis Of A 2-O-[2-(methoxy)ethyl]-2-thiothymidine Modified Oligodeoxynucleotide Duplex
Descriptor: 5'-D(*GP*CP*GP*TP*AP*(S2M)P*AP*CP*GP*C)-3')
Authors:Diop-Frimpong, B, Prakash, T.P, Rajeev, K.G, Manoharan, M, Egli, M.
Deposit date:2005-09-04
Release date:2005-11-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Stabilizing contributions of sulfur-modified nucleotides: crystal structure of a DNA duplex with 2'-O-[2-(methoxy)ethyl]-2-thiothymidines.
Nucleic Acids Res., 33, 2005
2DBK
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BU of 2dbk by Molmil
Solution structures of the SH3 domain of human Crk-like protein
Descriptor: Crk-like protein
Authors:Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-12-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the SH3 domain of human Crk-like protein
To be Published
2DMU
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BU of 2dmu by Molmil
Solution structure of the homeobox domain of Homeobox protein goosecoid
Descriptor: Homeobox protein goosecoid
Authors:Ohnishi, S, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-24
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the homeobox domain of Homeobox protein goosecoid
To be Published
2DCU
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BU of 2dcu by Molmil
Crystal structure of translation initiation factor aIF2betagamma heterodimer with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 beta subunit, ...
Authors:Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I.
Deposit date:2006-01-16
Release date:2006-07-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
2DCZ
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Thermal Stabilization of Bacillus subtilis Family-11 Xylanase By Directed Evolution
Descriptor: 1,4-DIETHYLENE DIOXIDE, Endo-1,4-beta-xylanase A, SULFATE ION
Authors:Kondo, H, Miyazaki, K, Takenouchi, M, Noro, N, Suzuki, M, Tsuda, S.
Deposit date:2006-01-18
Release date:2006-02-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Thermal Stabilization of Bacillus subtilis Family-11 Xylanase by Directed Evolution
J.Biol.Chem., 281, 2006
2DGU
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BU of 2dgu by Molmil
Solution structure of the RNA binding domain in Heterogeneous nuclear ribonucleoprotein Q
Descriptor: Heterogeneous nuclear ribonucleoprotein Q
Authors:Abe, C, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-15
Release date:2006-09-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in Heterogeneous nuclear ribonucleoprotein Q
To be Published
2DH7
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BU of 2dh7 by Molmil
Solution structure of the second RNA binding domain in Nucleolysin TIAR
Descriptor: Nucleolysin TIAR
Authors:Imai, T, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-23
Release date:2006-09-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second RNA binding domain in Nucleolysin TIAR
To be Published
2DCY
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BU of 2dcy by Molmil
Crystal structure of Bacillus subtilis family-11 xylanase
Descriptor: 1,4-DIETHYLENE DIOXIDE, D(-)-TARTARIC ACID, Endo-1,4-beta-xylanase A, ...
Authors:Kondo, H, Miyazaki, K, Takenouchi, M, Noro, N, Suzuki, M, Tsuda, S.
Deposit date:2006-01-18
Release date:2006-02-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Thermal Stabilization of Bacillus subtilis Family-11 Xylanase by Directed Evolution
J.Biol.Chem., 281, 2006
2DIN
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BU of 2din by Molmil
Solution structure of the Myb_DNA-binding domain of human Cell division cycle 5-like protein
Descriptor: Cell division cycle 5-like protein
Authors:Yoneyama, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-30
Release date:2007-04-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Myb_DNA-binding domain of human Cell division cycle 5-like protein
To be Published
2DJ3
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The solution structure of the third thioredoxin domain of mouse Protein disulfide-isomerase A4
Descriptor: Protein disulfide-isomerase A4
Authors:Tochio, N, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-30
Release date:2006-09-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the third thioredoxin domain of mouse Protein disulfide-isomerase A4
To be Published

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