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PDB: 51630 件

5YO4
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Crystal Structure of B562RIL with engineered disulfide bond K27C-A79C
分子名称: Soluble cytochrome b562
著者Pu, M, Xu, Z, Song, G, Liu, Z.J.
登録日2017-10-26
公開日2018-03-14
最終更新日2018-07-11
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Protein crystal quality oriented disulfide bond engineering.
Protein Cell, 9, 2018
5YKX
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The crystal structure of Macrobrachium rosenbergii nodavirus P-domain with Cd ion
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CADMIUM ION, Capsid protein, ...
著者Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
登録日2017-10-16
公開日2018-10-24
最終更新日2019-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YRB
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BU of 5yrb by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
6QA3
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ERK2 mini-fragment binding
分子名称: Mitogen-activated protein kinase 1, PYRAZOLE, SULFATE ION
著者O'Reilly, M, Cleasby, A, Davies, T.G, Hall, R, Ludlow, F, Murray, C.W, Tisi, D, Jhoti, H.
登録日2018-12-18
公開日2019-06-26
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design.
Drug Discov Today, 24, 2019
5XXM
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BU of 5xxm by Molmil
Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone
分子名称: D-glucono-1,5-lactone, MAGNESIUM ION, Periplasmic beta-glucosidase, ...
著者Nakajima, M, Ishiguro, R, Tanaka, N, Abe, K, Maeda, T, Miyanaga, A, Takahash, Y, Sugimoto, N, Nakai, H, Taguchi, H.
登録日2017-07-04
公開日2017-12-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Function and structure relationships of a beta-1,2-glucooligosaccharide-degrading beta-glucosidase.
FEBS Lett., 591, 2017
5XZE
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Mouse cGAS bound to the inhibitor RU332
分子名称: (3R)-3-[1-(3H-1lambda~4~,3-benzothiazol-2-yl)-5-hydroxy-3-methyl-1H-pyrazol-4-yl]-2-benzofuran-1(3H)-one, Cyclic GMP-AMP synthase, DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*G)-3'), ...
著者Vincent, J, Adura, C, Gao, P, Luz, A, Lama, L, Asano, Y, Okamoto, R, Imaeda, T, Aida, J, Rothamel, K, Gogakos, T, Steinberg, J, Reasoner, S, Aso, K, Tuschl, T, Patel, D.J, Glickman, J.F, Ascano, M.
登録日2017-07-12
公開日2017-10-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.177 Å)
主引用文献Small molecule inhibition of cGAS reduces interferon expression in primary macrophages from autoimmune mice.
Nat Commun, 8, 2017
5YRA
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BU of 5yra by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRK
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BU of 5yrk by Molmil
Crystal structure of PPL3C
分子名称: PPL3-b, SULFATE ION
著者Nakae, S, Shionyu, M, Ogawa, T, Shirai, T.
登録日2017-11-09
公開日2018-08-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization
Proteins, 86, 2018
8SFY
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Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with UDP-glucose
分子名称: UDP-glycosyltransferase 202A2, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Arriaza, R.H, Daneshian, L, Dermauw, W, Wybouw, N, Van Leeuwen, T, Chruszcz, M.
登録日2023-04-11
公開日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with UDP-glucose
To Be Published
6PYT
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BU of 6pyt by Molmil
CryoEM Structure of Pyocin R2 - precontracted - trunk
分子名称: Pyocin sheath PA0622, Pyocin tube PA0623
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-07-30
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6Q84
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BU of 6q84 by Molmil
Crystal structure of RanGTP-Pdr6-eIF5A export complex
分子名称: Eukaryotic translation initiation factor 5A-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Aksu, M, Trakhanov, S, Vera-Rodriguez, A, Gorlich, D.
登録日2018-12-14
公開日2019-05-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural basis for the nuclear import and export functions of the biportin Pdr6/Kap122.
J.Cell Biol., 218, 2019
8SFU
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BU of 8sfu by Molmil
Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with naringin
分子名称: (2S)-5-hydroxy-2-(4-hydroxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-7-yl 2-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranoside, UDP-glycosyltransferase 202A2, URIDINE-5'-DIPHOSPHATE
著者Arriaza, R.H, Dermauw, W, Wybouw, N, Van Leeuwen, T, Chruszcz, M.
登録日2023-04-11
公開日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with naringin
To Be Published
8SSF
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Minimal protein-only/RNA-free Ribonuclease P from Hydrogenobacter thermophilus
分子名称: RNA-free ribonuclease P, SULFATE ION
著者Mendoza, J, Mallik, L, Wilhelm, C.A, Koutmos, M.
登録日2023-05-08
公開日2023-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Bacterial RNA-free RNase P: Structural and functional characterization of multiple oligomeric forms of a minimal protein-only ribonuclease P.
J.Biol.Chem., 299, 2023
8SC3
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BU of 8sc3 by Molmil
Human OCT1 bound to fenoterol in inward-open conformation
分子名称: Fenoterol, Solute carrier family 22 member 1
著者Zeng, Y.C, Sobti, M, Stewart, A.G.
登録日2023-04-04
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Structural basis of promiscuous substrate transport by Organic Cation Transporter 1.
Nat Commun, 14, 2023
6Q93
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BU of 6q93 by Molmil
MgADP-bound Fe protein of Vanadium nitrogenase from Azotobacter vinelandii
分子名称: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Rohde, M, Gerhardt, S, Einsle, O.
登録日2018-12-17
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of VnfH, the iron protein component of vanadium nitrogenase.
J. Biol. Inorg. Chem., 23, 2018
5Y5S
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BU of 5y5s by Molmil
Structure of photosynthetic LH1-RC super-complex at 1.9 angstrom resolution
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BACTERIOCHLOROPHYLL A, ...
著者Yu, L.-J, Suga, M, Wang-Otomo, Z.-Y, Shen, J.-R.
登録日2017-08-09
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of photosynthetic LH1-RC supercomplex at 1.9 angstrom resolution.
Nature, 556, 2018
8SC4
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Human OCT1 bound to metformin in inward-open conformation
分子名称: Metformin, Solute carrier family 22 member 1
著者Zeng, Y.C, Sobti, M, Stewart, A.G.
登録日2023-04-04
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Structural basis of promiscuous substrate transport by Organic Cation Transporter 1.
Nat Commun, 14, 2023
5Y8J
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BU of 5y8j by Molmil
Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + (R)-3-hydroxyisobutyrate (R-HIBA)
分子名称: (2R)-3-HYDROXY-2-METHYLPROPANOIC ACID, (2~{S})-2-methylpentanedioic acid, ACRYLIC ACID, ...
著者Srikalaivani, R, Singh, A, Surolia, A, Vijayan, M.
登録日2017-08-21
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure, interactions and action ofMycobacterium tuberculosis3-hydroxyisobutyric acid dehydrogenase.
Biochem. J., 475, 2018
6QA1
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BU of 6qa1 by Molmil
ERK2 mini-fragment binding
分子名称: Mitogen-activated protein kinase 1, SULFATE ION, pyridin-2-amine
著者O'Reilly, M, Cleasby, A, Davies, T.G, Hall, R, Ludlow, F, Murray, C.W, Tisi, D, Jhoti, H.
登録日2018-12-18
公開日2019-06-26
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design.
Drug Discov Today, 24, 2019
8SEB
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BU of 8seb by Molmil
Cryo-EM structure of a single loaded human UBA7-UBE2L6-ISG15 adenylate complex
分子名称: ADENOSINE MONOPHOSPHATE, Ubiquitin-like modifier-activating enzyme 7, Ubiquitin-like protein ISG15, ...
著者Afsar, M, Jia, L, Ruben, E.A, Olsen, S.K.
登録日2023-04-08
公開日2023-10-11
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Cryo-EM structures of Uba7 reveal the molecular basis for ISG15 activation and E1-E2 thioester transfer.
Nat Commun, 14, 2023
6Q3W
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Structure of human galactokinase 1 bound with Ethyl 1-(2-pyrazinyl)-4-piperidinecarboxylate
分子名称: 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one, Galactokinase, beta-D-galactopyranose, ...
著者Mackinnon, S.R, Bezerra, G.A, Zhang, M, Foster, W, Krojer, T, Brandao-Neto, J, Douangamath, A, Arrowsmith, C, Edwards, A, Bountra, C, Brennan, P, Lai, K, Yue, W.W.
登録日2018-12-04
公開日2019-01-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献Structure of human galactokinase 1 bound with Ethyl 1-(2-pyrazinyl)-4-piperidinecarboxylate
To Be Published
8SC1
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BU of 8sc1 by Molmil
Human OCT1 (Apo) in inward-open conformation
分子名称: Solute carrier family 22 member 1
著者Zeng, Y.C, Sobti, M, Stewart, A.G.
登録日2023-04-04
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structural basis of promiscuous substrate transport by Organic Cation Transporter 1.
Nat Commun, 14, 2023
5YA6
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Crystal structure of archaeal flagellin FlaB1 from Methanocaldococcus jannaschii
分子名称: CALCIUM ION, Flagellin B1
著者Meshcheryakov, V.A, Wolf, M.
登録日2017-08-30
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献High-resolution archaellum structure reveals a conserved metal-binding site.
Embo Rep., 20, 2019
6Q4S
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Crystal structure of a-eudesmol synthase
分子名称: CHLORIDE ION, Pentalenene synthase
著者Correia Cordeiro, R.S, Hakansson, M, Logan, D.T, Kourist, R.
登録日2018-12-06
公開日2018-12-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Discovery of three novel sesquiterpene synthases from Streptomyces chartreusis NRRL 3882 and crystal structure of an alpha-eudesmol synthase.
J.Biotechnol., 297, 2019
5YBM
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BU of 5ybm by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA
分子名称: PrhA
著者Nakashima, Y, Senda, M.
登録日2017-09-05
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.115 Å)
主引用文献Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Nat Commun, 9, 2018

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