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PDB: 214 results

1CEH
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STRUCTURE AND FUNCTION OF THE CATALYTIC SITE MUTANT ASP99ASN OF PHOSPHOLIPASE A2: ABSENCE OF CONSERVED STRUCTURAL WATER
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Kumar, A, Sekharudu, C, Ramakrishnan, B, Dupureur, C.M, Zhu, H, Tsai, M.-D, Sundaralingam, M.
Deposit date:1994-11-16
Release date:1995-02-07
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of the catalytic site mutant Asp 99 Asn of phospholipase A2: absence of the conserved structural water.
Protein Sci., 3, 1994
1FMF
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REFINED SOLUTION STRUCTURE OF THE (13C,15N-LABELED) B12-BINDING SUBUNIT OF GLUTAMATE MUTASE FROM CLOSTRIDIUM TETANOMORPHUM
Descriptor: METHYLASPARTATE MUTASE S CHAIN
Authors:Hoffmann, B, Konrat, R, Tollinger, M, Huhta, M, Marsh, E.N.G, Kraeutler, B.
Deposit date:2000-08-17
Release date:2002-02-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A protein pre-organized to trap the nucleotide moiety of coenzyme B(12): refined solution structure of the B(12)-binding subunit of glutamate mutase from Clostridium tetanomorphum.
Chembiochem, 2, 2001
1OSU
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STRUCTURE OF THE RNA HEXAMER, R(UUCGCG), WITH A 5'-UU-OVERHANG EXHIBITING HOOGSTEEN-LIKE TRANS U-U BASE PAIRS
Descriptor: RNA (5'-R(*UP*UP*CP*GP*CP*G)-3')
Authors:Wahl, M.C, Rao, S.T, Sundaralingam, M.
Deposit date:1995-11-08
Release date:1996-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The structure of r(UUCGCG) has a 5'-UU-overhang exhibiting Hoogsteen-like trans U.U base pairs.
Nat.Struct.Biol., 3, 1996
1RCF
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STRUCTURE OF THE TRIGONAL FORM OF RECOMBINANT OXIDIZED FLAVODOXIN FROM ANABAENA 7120 AT 1.40 ANGSTROMS RESOLUTION
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, SULFATE ION
Authors:Burkhart, B, Ramakrishnan, B, Yan, H, Reedstrom, R, Markley, J, Straus, N, Sundaralingam, M.
Deposit date:1994-10-31
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of the trigonal form of recombinant oxidized flavodoxin from Anabaena 7120 at 1.40 A resolution.
Acta Crystallogr.,Sect.D, 51, 1995
1EVP
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CRYSTAL STRUCTURE OF THE CHIMERICAL DECAMER D(CCACTAGTG)R(G)
Descriptor: DNA/RNA (5'-D(*CP*CP*AP*CP*TP*AP*GP*TP*GP)-R(*G)-3')
Authors:Wahl, M.C, Sundaralingam, M.
Deposit date:2000-04-20
Release date:2000-05-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:B-form to A-form conversion by a 3'-terminal ribose: crystal structure of the chimera d(CCACTAGTG)r(G).
Nucleic Acids Res., 28, 2000
1AZR
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CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA ZINC AZURIN MUTANT ASP47ASP AT 2.4 ANGSTROMS RESOLUTION
Descriptor: AZURIN, COPPER (II) ION, NITRATE ION
Authors:Sjolin, L, Tsai, Lc, Langer, V, Pascher, T, Karlsson, G, Nordling, M, Nar, H.
Deposit date:1993-03-04
Release date:1993-07-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Pseudomonas aeruginosai zinc azurin mutant Asn47Asp at 2.4 A resolution.
Acta Crystallogr.,Sect.D, 49, 1993
1FLV
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STRUCTURE OF THE OXIDIZED LONG CHAIN FLAVODOXIN FROM ANABAENA 7120 AT 2 ANGSTROMS RESOLUTION
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Rao, S.T, Sundaralingam, M.
Deposit date:1992-07-02
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the oxidized long-chain flavodoxin from Anabaena 7120 at 2 A resolution.
Protein Sci., 1, 1992
1J8G
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X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution
Descriptor: 5'-R(*UP*GP*GP*GP*GP*U)-3', CALCIUM ION, SODIUM ION, ...
Authors:Deng, J, Xiong, Y, Sundaralingam, M.
Deposit date:2001-05-21
Release date:2001-11-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.61 Å)
Cite:X-ray analysis of an RNA tetraplex (UGGGGU)(4) with divalent Sr(2+) ions at subatomic resolution (0.61 A).
Proc.Natl.Acad.Sci.USA, 98, 2001
1S5F
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Cholera holotoxin, Crystal form 2
Descriptor: Cholera enterotoxin, A chain, SODIUM ION, ...
Authors:O'Neal, C.J, Amaya, E.I, Jobling, M.G, Holmes, R.K, Hol, W.G.
Deposit date:2004-01-20
Release date:2004-04-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of an intrinsically active cholera toxin mutant yield insight into the toxin activation mechanism
Biochemistry, 43, 2004
1S5E
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Cholera holotoxin, Crystal form 1
Descriptor: Cholera enterotoxin, A chain precursor, SODIUM ION, ...
Authors:O'Neal, C.J, Amaya, E.I, Jobling, M.G, Holmes, R.K, Hol, W.G.
Deposit date:2004-01-20
Release date:2004-04-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of an intrinsically active cholera toxin mutant yield insight into the toxin activation mechanism
Biochemistry, 43, 2004
1S5C
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Cholera holotoxin with an A-subunit Y30S mutation, Crystal form 1
Descriptor: Cholera enterotoxin, A chain, SODIUM ION, ...
Authors:O'Neal, C.J, Amaya, E.I, Jobling, M.G, Holmes, R.K, Hol, W.G.
Deposit date:2004-01-20
Release date:2004-04-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of an intrinsically active cholera toxin mutant yield insight into the toxin activation mechanism
Biochemistry, 43, 2004
1DVL
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CRYSTAL STRUCTURE OF THE 1:1 NETROPSIN-DECAMER D(CCIICICCII)2 COMPLEX WITH ONLY ONE DRUG BOUND AT ONE END
Descriptor: 5'-D(*CP*CP*IP*IP*CP*IP*CP*CP*IP*I)-3', NETROPSIN
Authors:Shi, K, Mitra, S.N, Sundaralingam, M.
Deposit date:2000-01-21
Release date:2002-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the 1:1 netropsin-decamer d(CCIICICCII)2 complex with a single bound netropsin.
Acta Crystallogr.,Sect.D, 58, 2002
1S5D
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Cholera holotoxin with an A-subunit Y30S mutation, Crystal form 2
Descriptor: Cholera enterotoxin, A chain, GLYCEROL, ...
Authors:O'Neal, C.J, Amaya, E.I, Jobling, M.G, Holmes, R.K, Hol, W.G.
Deposit date:2004-01-20
Release date:2004-04-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of an intrinsically active cholera toxin mutant yield insight into the toxin activation mechanism
Biochemistry, 43, 2004
1S5B
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Cholera holotoxin with an A-subunit Y30S mutation Form 3
Descriptor: Cholera enterotoxin, A chain precursor, SODIUM ION, ...
Authors:O'Neal, C.J, Amaya, E.I, Jobling, M.G, Holmes, R.K, Hol, W.G.
Deposit date:2004-01-20
Release date:2004-04-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structures of an intrinsically active cholera toxin mutant yield insight into the toxin activation mechanism
Biochemistry, 43, 2004
1J6S
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Crystal Structure of an RNA Tetraplex (UGAGGU)4 with A-tetrads, G-tetrads, U-tetrads and G-U octads
Descriptor: 5'-R(*(BRUP*GP*AP*GP*GP*U)-3', BARIUM ION, SODIUM ION
Authors:Pan, B, Xiong, Y, Shi, K, Deng, J, Sundaralingam, M.
Deposit date:2002-07-10
Release date:2003-08-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of an RNA purine-rich tetraplex containing adenine tetrads: implications for specific binding in RNA tetraplexes
Structure, 11, 2003
1JZV
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Crystal structure of a bulged RNA from the SL2 stem-loop of the HIV-1 psi-RNA
Descriptor: 5'-R(*CP*AP*GP*UP*AP*CP*GP*(5IC)P*C)-3', 5'-R(*GP*GP*CP*GP*AP*CP*(5BU)P*G)-3', MAGNESIUM ION
Authors:Xiong, Y, Sudarsanakumar, C, Deng, J, Pan, B, Sundaralingam, M.
Deposit date:2001-09-17
Release date:2003-11-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Bulged RNA from the SL2 Stem-loop of the HIV-1 psi-RNA
To be Published
1D78
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HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3')
Authors:Thota, N, Li, X.H, Bingman, C.A, Sundaralingam, M.
Deposit date:1992-06-12
Release date:1993-04-15
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A.
Acta Crystallogr.,Sect.D, 49, 1993
1QHH
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STRUCTURE OF DNA HELICASE WITH ADPNP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, PROTEIN (PCRA (SUBUNIT))
Authors:Soultanas, P, Dillingham, M.S, Velankar, S.S, Wigley, D.B.
Deposit date:1999-05-14
Release date:1999-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA binding mediates conformational changes and metal ion coordination in the active site of PcrA helicase.
J.Mol.Biol., 290, 1999
1D79
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HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3')
Authors:Thota, N, Li, X.H, Bingman, C.A, Sundaralingam, M.
Deposit date:1992-06-12
Release date:1993-04-15
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A.
Acta Crystallogr.,Sect.D, 49, 1993
1DNS
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BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC)
Descriptor: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3'), SPERMINE
Authors:Jain, S.C, Zon, G, Sundaralingam, M.
Deposit date:1989-02-22
Release date:1990-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC).
Biochemistry, 28, 1989
1DN8
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STRUCTURE OF A Z-DNA WITH TWO DIFFERENT BACKBONE CHAIN CONFORMATIONS. STABILIZATION OF THE DECADEOXYOLIGONUCLEOTIDE D(CGTACGTACG) BY (CO(NH3)6)3+ BINDING TO THE GUANINE
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*P*CP*GP*TP*AP*CP*GP*TP*AP*CP*G)-3')
Authors:Brennan, R.G, Westhof, E, Sundaralingam, M.
Deposit date:1987-05-12
Release date:1988-04-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a Z-DNA with two different backbone chain conformations. Stabilization of the decadeoxyoligonucleotide d(CGTACGTACG) by [Co(NH3)6]3+ binding to the guanine.
J.Biomol.Struct.Dyn., 3, 1986
1QHG
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STRUCTURE OF DNA HELICASE MUTANT WITH ADPNP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-DEPENDENT HELICASE PCRA, MAGNESIUM ION
Authors:Soultanas, P, Dillingham, M.S, Velankar, S.S, Wigley, D.B.
Deposit date:1999-05-14
Release date:1999-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA binding mediates conformational changes and metal ion coordination in the active site of PcrA helicase.
J.Mol.Biol., 290, 1999
160D
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HIGH RESOLUTION CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCCGGCCGGG): NOVEL INTERMOLECULAR BASE-PAIRED G*(G.C) TRIPLETS
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*CP*CP*GP*GP*G)-3')
Authors:Ramakrishnan, B, Sundaralingam, M.
Deposit date:1994-02-10
Release date:1994-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:High resolution crystal structure of the A-DNA decamer d(CCCGGCCGGG). Novel intermolecular base-paired G*(G.C) triplets.
J.Mol.Biol., 231, 1993
194D
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X-RAY STRUCTURES OF THE B-DNA DODECAMER D(CGCGTTAACGCG) WITH AN INVERTED CENTRAL TETRANUCLEOTIDE AND ITS NETROPSIN COMPLEX
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*TP*AP*AP*CP*GP*CP*G)-3')
Authors:Balendiran, K, Rao, S.T, Sekharudu, C.Y, Zon, G, Sundaralingam, M.
Deposit date:1994-10-04
Release date:1995-03-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray structures of the B-DNA dodecamer d(CGCGTTAACGCG) with an inverted central tetranucleotide and its netropsin complex.
Acta Crystallogr.,Sect.D, 51, 1995
161D
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A SINGLE 2'-HYDROXYL GROUP CONVERTS B-DNA TO A-DNA: CRYSTAL STRUCTURE OF THE DNA-RNA CHIMERIC DECAMER DUPLEX D(CCGGC)R(G)D(CCGG) WITH A NOVEL INTERMOLECULAR G.C BASE-PAIRED QUADRUPLET
Descriptor: DNA/RNA (5'-D(*CP*CP*GP*GP*CP*)-R(*GP*)-D(*CP*CP*GP*G)-3')
Authors:Ban, C, Ramakrishnan, B, Sundaralingam, M.
Deposit date:1994-02-10
Release date:1994-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A single 2'-hydroxyl group converts B-DNA to A-DNA. Crystal structure of the DNA-RNA chimeric decamer duplex d(CCGGC)r(G)d(CCGG) with a novel intermolecular G-C base-paired quadruplet.
J.Mol.Biol., 236, 1994

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