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PDB: 217 件
2JI8
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X-ray structure of Oxalyl-CoA decarboxylase in complex with Formyl- CoA
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, OXALYL-COA DECARBOXYLASE, ...
著者Berthold, C.L, Toyota, C.G, Moussatche, P, Wood, M.D, Leeper, F, Richards, N.G.J, Lindqvist, Y.
登録日2007-02-26
公開日2007-07-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystallographic Snapshots of Oxalyl-Coa Decarboxylase Give Insights Into Catalysis by Nonoxidative Thdp-Dependent Decarboxylases
Structure, 15, 2007
2JI7
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X-ray structure of Oxalyl-CoA decarboxylase with covalent reaction intermediate
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1R,11R,15S,17R)-19-[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]-1,11,15,17-TETRAHYDROXY-12,12-DIMETHYL-15,17-DIOXIDO-6,10-DIOXO-14,16,18-TRIOXA-2-THIA-5,9-DIAZA-15,17-DIPHOSPHANONADEC-1-YL}-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, ADENOSINE-5'-DIPHOSPHATE, ...
著者Berthold, C.L, Toyota, C.G, Moussatche, P, Wood, M.D, Leeper, F, Richards, N.G.J, Lindqvist, Y.
登録日2007-02-26
公開日2007-07-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystallographic Snapshots of Oxalyl-Coa Decarboxylase Give Insights Into Catalysis by Nonoxidative Thdp-Dependent Decarboxylases
Structure, 15, 2007
2JI9
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X-ray structure of Oxalyl-CoA decarboxylase in complex with 3-deaza- ThDP
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Berthold, C.L, Toyota, C.G, Moussatche, P, Wood, M.D, Leeper, F, Richards, N.G.J, Lindqvist, Y.
登録日2007-02-26
公開日2007-07-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystallographic Snapshots of Oxalyl-Coa Decarboxylase Give Insights Into Catalysis by Nonoxidative Thdp-Dependent Decarboxylases
Structure, 15, 2007
2WG9
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BU of 2wg9 by Molmil
Structure of Oryza Sativa (Rice) PLA2, complex with octanoic acid
分子名称: CALCIUM ION, OCTANOIC ACID (CAPRYLIC ACID), PUTATIVE PHOSPHOLIPASE A2, ...
著者Guy, J.E, Stahl, U, Lindqvist, Y.
登録日2009-04-16
公開日2009-06-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of a Class Xib Phospholipase A2 (Pla2): Rice (Oryza Sativa) Isoform-2 Pla2 and an Octanoate Complex.
J.Biol.Chem., 284, 2009
2VJO
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Formyl-CoA transferase mutant variant Q17A with aspartyl-CoA thioester intermediates and oxalate
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, COENZYME A, ...
著者Berthold, C.L, Toyota, C.G, Richards, N.G.J, Lindqvist, Y.
登録日2007-12-11
公開日2007-12-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase.
J.Biol.Chem., 283, 2008
2W0U
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CRYSTAL STRUCTURE OF HUMAN GLYCOLATE OXIDASE IN COMPLEX WITH THE INHIBITOR 5-[(4-CHLOROPHENYL)SULFANYL]- 1,2,3-THIADIAZOLE-4-CARBOXYLATE.
分子名称: 5-[(4-chlorophenyl)sulfanyl]-1,2,3-thiadiazole-4-carboxylate, FLAVIN MONONUCLEOTIDE, HYDROXYACID OXIDASE 1
著者Bourhis, J.M, Lindqvist, Y.
登録日2008-10-10
公開日2009-11-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Structure of Human Glycolate Oxidase in Complex with the Inhibitor 4-Carboxy-5-[(4-Chlorophenyl)Sulfanyl]-1,2,3-Thiadiazole.
Acta Crystallogr.,Sect.F, 65, 2009
2WG7
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BU of 2wg7 by Molmil
Structure of Oryza Sativa (Rice) PLA2
分子名称: CALCIUM ION, PUTATIVE PHOSPHOLIPASE A2, SODIUM ION
著者Guy, J.E, Stahl, U, Lindqvist, Y.
登録日2009-04-16
公開日2009-06-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of a Class Xib Phospholipase A2 (Pla2): Rice (Oryza Sativa) Isoform-2 Pla2 and an Octanoate Complex.
J.Biol.Chem., 284, 2009
2VJL
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BU of 2vjl by Molmil
Formyl-CoA transferase with aspartyl-CoA thioester intermediate derived from formyl-CoA
分子名称: CHLORIDE ION, COENZYME A, FORMYL-COENZYME A TRANSFERASE, ...
著者Berthold, C.L, Toyota, C.G, Richards, N.G.J, Lindqvist, Y.
登録日2007-12-11
公開日2007-12-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase.
J.Biol.Chem., 283, 2008
2VJK
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Formyl-CoA transferase with aspartyl-CoA thioester intermediate derived from oxalyl-CoA
分子名称: CHLORIDE ION, COENZYME A, FORMYL-COENZYME A TRANSFERASE, ...
著者Berthold, C.L, Toyota, C.G, Richards, N.G.J, Lindqvist, Y.
登録日2007-12-11
公開日2007-12-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase.
J.Biol.Chem., 283, 2008
2VJP
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Formyl-CoA transferase mutant variant W48F
分子名称: FORMYL-COENZYME A TRANSFERASE, SODIUM ION
著者Toyota, C.G, Berthold, C.L, Gruez, A, Jonsson, S, Lindqvist, Y, Cambillau, C, Richards, N.G.J.
登録日2007-12-11
公開日2008-01-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Differential Substrate Specificity and Kinetic Behavior of Escherichia Coli Yfdw and Oxalobacter Formigenes Formyl Coenzyme a Transferase.
J.Bacteriol., 190, 2008
2VJQ
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BU of 2vjq by Molmil
Formyl-CoA transferase mutant variant W48Q
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FORMYL-COENZYME A TRANSFERASE
著者Toyota, C.G, Berthold, C.L, Gruez, A, Jonsson, S, Lindqvist, Y, Cambillau, C, Richards, N.G.J.
登録日2007-12-11
公開日2008-01-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Differential Substrate Specificity and Kinetic Behavior of Escherichia Coli Yfdw and Oxalobacter Formigenes Formyl Coenzyme a Transferase.
J.Bacteriol., 190, 2008
2VJM
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BU of 2vjm by Molmil
Formyl-CoA transferase with aspartyl-formyl anhydide intermediate
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, COENZYME A, FORMYL-COENZYME A TRANSFERASE, ...
著者Berthold, C.L, Toyota, C.G, Richards, N.G.J, Lindqvist, Y.
登録日2007-12-11
公開日2007-12-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase.
J.Biol.Chem., 283, 2008
2WG8
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BU of 2wg8 by Molmil
Structure of Oryza Sativa (Rice) PLA2, orthorhombic crystal form
分子名称: CALCIUM ION, PUTATIVE PHOSPHOLIPASE A2, SODIUM ION
著者Guy, J.E, Stahl, U, Lindqvist, Y.
登録日2009-04-16
公開日2009-06-02
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of a Class Xib Phospholipase A2 (Pla2): Rice (Oryza Sativa) Isoform-2 Pla2 and an Octanoate Complex.
J.Biol.Chem., 284, 2009
2VJN
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BU of 2vjn by Molmil
Formyl-CoA transferase mutant variant G260A
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FORMYL-COENZYME A TRANSFERASE
著者Berthold, C.L, Toyota, C.G, Richards, N.G.J, Lindqvist, Y.
登録日2007-12-11
公開日2007-12-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase.
J.Biol.Chem., 283, 2008
2VRG
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BU of 2vrg by Molmil
Structure of human MCFD2
分子名称: CALCIUM ION, MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2
著者Guy, J.E, Wigren, E, Svard, M, Hard, T, Lindqvist, Y.
登録日2008-04-04
公開日2008-07-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献New insights into multiple coagulation factor deficiency from the solution structure of human MCFD2.
J. Mol. Biol., 381, 2008
2LXP
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BU of 2lxp by Molmil
NMR structure of two domains in ubiquitin ligase gp78, RING and G2BR, bound to its conjugating enzyme Ube2g
分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin-conjugating enzyme E2 G2, ZINC ION
著者Das, R, Linag, Y, Mariano, J, Li, J, Huang, T, King, A, Weissman, A, Ji, X, Byrd, R.
登録日2012-08-30
公開日2013-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
Embo J., 32, 2013
2LXH
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BU of 2lxh by Molmil
NMR structure of the RING domain in ubiquitin ligase gp78
分子名称: E3 ubiquitin-protein ligase AMFR, ZINC ION
著者Das, R, Linag, Y, Mariano, J, Li, J, Huang, T, King, A, Weissman, A, Ji, X, Byrd, R.
登録日2012-08-27
公開日2013-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
Embo J., 32, 2013

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