Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 160 results

2XUB
DownloadVisualize
BU of 2xub by Molmil
Human RPC62 subunit structure
Descriptor: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3
Authors:Lefevre, S, Legrand, P, Fribourg, S.
Deposit date:2010-10-18
Release date:2011-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-Function Analysis of Hrpc62 Provides Insights Into RNA Polymerase III Transcription
Nat.Struct.Mol.Biol., 18, 2011
8BHD
DownloadVisualize
BU of 8bhd by Molmil
N-terminal domain of Plasmodium berghei glutamyl-tRNA synthetase (Tbxo4 derivative crystal structure)
Descriptor: GLYCEROL, Glutamate--tRNA ligase, SULFATE ION, ...
Authors:Benas, P, Jaramillo Ponce, J.R, Legrand, P, Frugier, M, Sauter, C.
Deposit date:2022-10-31
Release date:2023-01-25
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Solution X-ray scattering highlights discrepancies in Plasmodium multi-aminoacyl-tRNA synthetase complexes.
Protein Sci., 32, 2023
7B08
DownloadVisualize
BU of 7b08 by Molmil
TgoT apo
Descriptor: DNA polymerase, THYMIDINE-5'-TRIPHOSPHATE, TRIETHYLENE GLYCOL
Authors:Samson, C, Legrand, P, Tekpinar, M, Rozenski, J, Abramov, M, Holliger, P, Pinheiro, V, Herdewijn, P, Delarue, M.
Deposit date:2020-11-18
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.394 Å)
Cite:Structural Studies of HNA Substrate Specificity in Mutants of an Archaeal DNA Polymerase Obtained by Directed Evolution.
Biomolecules, 10, 2020
7B07
DownloadVisualize
BU of 7b07 by Molmil
TgoT_6G12 apo
Descriptor: CALCIUM ION, DNA polymerase
Authors:Samson, C, Legrand, P, Tekpinar, M, Rozenski, J, Abramov, M, Holliger, P, Pinheiro, V, Herdewijn, P, Delarue, M.
Deposit date:2020-11-18
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.099 Å)
Cite:Structural Studies of HNA Substrate Specificity in Mutants of an Archaeal DNA Polymerase Obtained by Directed Evolution.
Biomolecules, 10, 2020
7B06
DownloadVisualize
BU of 7b06 by Molmil
TgoT_RT521 apo
Descriptor: DNA polymerase
Authors:Samson, C, Legrand, P, Tekpinar, M, Rozenski, J, Abramov, M, Holliger, P, Pinheiro, V, Herdewijn, P, Delarue, M.
Deposit date:2020-11-18
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Structural Studies of HNA Substrate Specificity in Mutants of an Archaeal DNA Polymerase Obtained by Directed Evolution.
Biomolecules, 10, 2020
6FI9
DownloadVisualize
BU of 6fi9 by Molmil
Crystal Structure of a zinc-responsive MarR family member, Lactococcus lactis ZitR
Descriptor: Transcriptional regulator ZitR, ZINC ION
Authors:Varela, P.F, Legrand, P.
Deposit date:2018-01-17
Release date:2019-02-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Biophysical and structural characterization of a zinc-responsive repressor of the MarR superfamily.
PLoS ONE, 14, 2019
4C3H
DownloadVisualize
BU of 4c3h by Molmil
Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93
Descriptor: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ...
Authors:Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
Deposit date:2013-08-24
Release date:2013-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
4C3I
DownloadVisualize
BU of 4c3i by Molmil
Structure of 14-subunit RNA polymerase I at 3.0 A resolution, crystal form C2-100
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, ...
Authors:Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
Deposit date:2013-08-24
Release date:2013-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
4C3J
DownloadVisualize
BU of 4c3j by Molmil
Structure of 14-subunit RNA polymerase I at 3.35 A resolution, crystal form C2-90
Descriptor: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ...
Authors:Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
Deposit date:2013-08-24
Release date:2013-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
7ATH
DownloadVisualize
BU of 7ath by Molmil
Crystal structure of UipA
Descriptor: UipA, ZINC ION
Authors:Bremond, N, Gallois, N, Legrand, P, Chapon, V, Arnoux, P.
Deposit date:2020-10-30
Release date:2021-10-06
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.343 Å)
Cite:Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria.
Isme J, 16, 2022
7ATK
DownloadVisualize
BU of 7atk by Molmil
Crystal structure of UipA in complex with Uranium
Descriptor: URANIUM ATOM, UipA, ZINC ION
Authors:Bremond, N, Gallois, N, Legrand, P, Chapon, V, Arnoux, P.
Deposit date:2020-10-30
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.855 Å)
Cite:Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria.
Isme J, 16, 2022
6ZA3
DownloadVisualize
BU of 6za3 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZAB
DownloadVisualize
BU of 6zab by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Naretto, A, Vigouroux, A, Legrand, P.
Deposit date:2020-06-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZP9
DownloadVisualize
BU of 6zp9 by Molmil
Cyanophage S-2L Primase-Polymerase (PrimPol), AEP domain (PP-N190)
Descriptor: CALCIUM ION, PrimPol AEP domain (PP-N190)
Authors:Czernecki, D, Legrand, P, Delarue, M.
Deposit date:2020-07-08
Release date:2021-03-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.50002229 Å)
Cite:How cyanophage S-2L rejects adenine and incorporates 2-aminoadenine to saturate hydrogen bonding in its DNA.
Nat Commun, 12, 2021
6F2B
DownloadVisualize
BU of 6f2b by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, L-lysine 3-hydroxylase
Authors:Isabet, T, Stura, E.A, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-11-24
Release date:2018-11-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6EXF
DownloadVisualize
BU of 6exf by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/Lysine
Descriptor: FE (III) ION, GLYCEROL, L-lysine 4-hydroxylase, ...
Authors:Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-11-08
Release date:2018-11-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6F9P
DownloadVisualize
BU of 6f9p by Molmil
Crystal structure of the Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Re(II)
Descriptor: CHLORIDE ION, GLYCEROL, L-lysine 4-hydroxylase, ...
Authors:Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-12-15
Release date:2018-11-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6EXH
DownloadVisualize
BU of 6exh by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/succinate/(4R)-4-hydroxy-L-lysine
Descriptor: 4-HYDROXY-LYSINE, FE (III) ION, GLYCEROL, ...
Authors:Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-11-08
Release date:2018-11-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6EUO
DownloadVisualize
BU of 6euo by Molmil
Crystal structure of APO Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5
Descriptor: D-MALATE, FE (III) ION, GLYCEROL, ...
Authors:Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-10-30
Release date:2018-11-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6EUR
DownloadVisualize
BU of 6eur by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Fe(II)/alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, GLYCEROL, ...
Authors:Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-10-31
Release date:2018-11-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
4A3V
DownloadVisualize
BU of 4a3v by Molmil
yeast regulatory particle proteasome assembly chaperone Hsm3 in complex with Rpt1 C-terminal fragment
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 7 HOMOLOG, DNA MISMATCH REPAIR PROTEIN HSM3, LINKER
Authors:Richet, N, Barrault, M.B, Godart, C, Murciano, B, Le Tallec, B, Rousseau, E, Ledu, M.H, Charbonnier, J.B, Legrand, P, Guerois, R, Peyroche, A, Ochsenbein, F.
Deposit date:2011-10-04
Release date:2012-04-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Dual Functions of the Hsm3 Protein in Chaperoning and Scaffolding Regulatory Particle Subunits During the Proteasome Assembly.
Proc.Natl.Acad.Sci.USA, 109, 2012
4A3T
DownloadVisualize
BU of 4a3t by Molmil
yeast regulatory particle proteasome assembly chaperone Hsm3
Descriptor: DNA MISMATCH REPAIR PROTEIN HSM3
Authors:Richet, N, Barrault, M.B, Godart, C, Murciano, B, Le Tallec, B, Rousseau, E, Ledu, M.H, Charbonnier, J.B, Legrand, P, Guerois, R, Peyroche, A, Ochsenbein, F.
Deposit date:2011-10-04
Release date:2012-04-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dual Functions of the Hsm3 Protein in Chaperoning and Scaffolding Regulatory Particle Subunits During the Proteasome Assembly.
Proc.Natl.Acad.Sci.USA, 109, 2012
6F6J
DownloadVisualize
BU of 6f6j by Molmil
Crystal structure of the Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/succinate/(3S)-3-hydroxy-L-lysine
Descriptor: (2~{S},3~{R})-2,6-bis(azanyl)-3-oxidanyl-hexanoic acid, ACETATE ION, FE (III) ION, ...
Authors:Isabet, T, Stura, E.A, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-12-05
Release date:2018-11-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6F2A
DownloadVisualize
BU of 6f2a by Molmil
Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/Lysine
Descriptor: ACETIC ACID, CHLORIDE ION, FE (II) ION, ...
Authors:Isabet, T, Stura, E.A, Legrand, P, Zaparucha, A, Bastard, K.
Deposit date:2017-11-24
Release date:2018-11-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
6H6P
DownloadVisualize
BU of 6h6p by Molmil
UbiJ-SCP2 Ubiquinone synthesis protein
Descriptor: CALCIUM ION, PENTAETHYLENE GLYCOL, Ubiquinone biosynthesis protein UbiJ
Authors:Fyfe, C.D, Legrand, P, Pecqueur, L, Ciccone, L, Lombard, M, Fontecave, M.
Deposit date:2018-07-28
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone.
Cell Chem Biol, 26, 2019

221716

數據於2024-06-26公開中

PDB statisticsPDBj update infoContact PDBjnumon