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PDB: 209 件
5WQ0
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Receiver domain of Spo0A from Paenisporosarcina sp. TG-14
分子名称: MAGNESIUM ION, Stage 0 sporulation protein
著者Lee, J.H, Lee, C.W.
登録日2016-11-22
公開日2017-03-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Crystal structure of the inactive state of the receiver domain of Spo0A from Paenisporosarcina sp. TG-14, a psychrophilic bacterium isolated from an Antarctic glacier
J. Microbiol., 55, 2017
5ACO
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BU of 5aco by Molmil
Cryo-EM structure of PGT128 Fab in complex with BG505 SOSIP.664 Env trimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 ENVELOPE GLYCOPROTEIN, ...
著者Lee, J.H, Ward, A.B.
登録日2015-08-17
公開日2015-09-30
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献Model Building and Refinement of a Natively Glycosylated HIV-1 Env Protein by High-Resolution Cryoelectron Microscopy.
Structure, 23, 2015
5YL7
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Proteases from Pseudoalteromonas arctica PAMC 21717 (Pro21717)
分子名称: CALCIUM ION, Copurified unknown peptide, Pseudoalteromonas arctica PAMC 21717
著者Lee, J.H, Lee, C.W.
登録日2017-10-17
公開日2018-01-31
最終更新日2018-09-12
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of a cold-active protease (Pro21717) from the psychrophilic bacterium, Pseudoalteromonas arctica PAMC 21717, at 1.4 angstrom resolution: Structural adaptations to cold and functional analysis of a laundry detergent enzyme
PLoS ONE, 13, 2018
5BVT
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BU of 5bvt by Molmil
Palmitate-bound pFABP5
分子名称: Epidermal fatty acid-binding protein, PALMITOLEIC ACID
著者Lee, J.H, Lee, C.W, Do, H.
登録日2015-06-05
公開日2015-08-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
5BVS
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BU of 5bvs by Molmil
Linoleate-bound pFABP4
分子名称: Fatty acid-binding protein, LINOLEIC ACID
著者Lee, J.H, Lee, C.W, Do, H.
登録日2015-06-05
公開日2015-08-05
最終更新日2015-09-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
5BVQ
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BU of 5bvq by Molmil
Ligand-unbound pFABP4
分子名称: fatty acid-binding protein
著者Lee, J.H, Lee, C.W, Do, H.
登録日2015-06-05
公開日2015-08-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
5XGW
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BU of 5xgw by Molmil
Isoaspartyl dipeptidase from Colwellia psychrerythraea strain 34H
分子名称: Isoaspartyl dipeptidase, ZINC ION
著者Lee, J.H, Lee, C.W, Park, S.H.
登録日2017-04-18
公開日2018-06-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure and functional characterization of an isoaspartyl dipeptidase (CpsIadA) from Colwellia psychrerythraea strain 34H.
PLoS ONE, 12, 2017
5Z2F
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NADPH/PDA bound Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
分子名称: Dihydrodipicolinate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PYRIDINE-2,6-DICARBOXYLIC ACID
著者Lee, J.H, Lee, C.W, Park, S.
登録日2018-01-02
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
5Z2D
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Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
分子名称: dihydrodipicolinate reductase
著者Lee, J.H, Lee, C.W, Park, S.
登録日2018-01-02
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
5Z2E
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Dipicolinate bound Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
分子名称: Dihydrodipicolinate reductase, PYRIDINE-2,6-DICARBOXYLIC ACID
著者Lee, J.H, Lee, C.W, Park, S.
登録日2018-01-02
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
5XGX
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Crystal structure of colwellia psychrerythraea strain 34H isoaspartyl dipeptidase E80Q mutant complexed with beta-isoaspartyl lysine
分子名称: D-ASPARTIC ACID, D-LYSINE, Isoaspartyl dipeptidase, ...
著者Lee, J.H, Lee, C.W, Park, S.H.
登録日2017-04-18
公開日2018-02-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structure and functional characterization of an isoaspartyl dipeptidase (CpsIadA) from Colwellia psychrerythraea strain 34H.
PLoS ONE, 12, 2017
5BY2
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Sedoheptulose 7-phosphate isomerase from Colwellia psychrerythraea strain 34H
分子名称: Phosphoheptose isomerase
著者Lee, J.H, Chang, J.H, Do, H, Yun, J.S.
登録日2015-06-10
公開日2015-12-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure and Comparative Sequence Analysis of GmhA from Colwellia psychrerythraea Strain 34H Provides Insight into Functional Similarity with DiaA
Mol.Cells, 38, 2015
7C4X
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BU of 7c4x by Molmil
Crystal structure of germination protease from the spore-forming bacterium Paenisporosarcina sp. TG-20 in its inactive form
分子名称: germination protease
著者Lee, J.H, Lee, C.W.
登録日2020-05-18
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the psychrophilic germinal protease PaGPR and its autoinhibitory loop.
J.Microbiol, 58, 2020
4LQ8
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BU of 4lq8 by Molmil
Rickettsia rickettsii cell surface antigen 4 (sca4) head domain (residues 21-360)
分子名称: Sca-family protein
著者Lee, J.H, Vonrhein, C, Bricogne, G, Izard, T.
登録日2013-07-17
公開日2013-08-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the N-terminal domains of the surface cell antigen 4 of Rickettsia.
Protein Sci., 22, 2013
5V8M
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BU of 5v8m by Molmil
BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibody 3BNC117
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lee, J.H, Cottrell, C.A, Ward, A.B.
登録日2017-03-22
公開日2017-05-03
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic beta-Hairpin Structure.
Immunity, 46, 2017
5V8L
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BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibodies 3BNC117 and PGT145
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC117 antibody, ...
著者Lee, J.H, Ward, A.B.
登録日2017-03-22
公開日2017-05-03
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic beta-Hairpin Structure.
Immunity, 46, 2017
2B8I
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BU of 2b8i by Molmil
Crystal Structure and Functional Studies Reveal that PAS Factor from Vibrio vulnificus is a Novel Member of the Saposin-Fold Family
分子名称: PAS factor
著者Lee, J.H, Yang, S.T, Rho, S.H, Im, Y.J, Kim, S.Y, Kim, Y.R, Kim, M.K, Kang, G.B, Kim, J.I, Rhee, J.H, Eom, S.H.
登録日2005-10-07
公開日2006-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and functional studies reveal that PAS factor from Vibrio vulnificus is a novel member of the saposin-fold family
J.Mol.Biol., 355, 2006
5XWB
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BU of 5xwb by Molmil
Crystal Structure of 5-Enolpyruvulshikimate-3-phosphate Synthase from a Psychrophilic Bacterium, Colwellia psychrerythraea
分子名称: 3-phosphoshikimate 1-carboxyvinyltransferase
著者Lee, J.H, Kim, H.J, Choi, J.M, Kim, D.-W, Seo, Y.-S.
登録日2017-06-29
公開日2017-09-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of 5-enolpyruvylshikimate-3-phosphate synthase from a psychrophilic bacterium, Colwellia psychrerythraea 34H.
Biochem. Biophys. Res. Commun., 492, 2017
2FB9
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BU of 2fb9 by Molmil
Crystal structure of the Apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: a basis for the substrate-induced conformational changes
分子名称: D-alanine:D-alanine ligase
著者Lee, J.H, Na, Y, Eom, S.H.
登録日2005-12-08
公開日2006-08-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: A basis for the substrate-induced conformational changes
Proteins, 64, 2006
2FJK
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Crystal structure of Fructose-1,6-Bisphosphate Aldolase in Thermus caldophilus
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase
著者Lee, J.H, Im, Y.J, Rho, S.-H, Kim, M.-K, Kang, G.B, Eom, S.H.
登録日2006-01-03
公開日2006-08-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Stereoselectivity of fructose-1,6-bisphosphate aldolase in Thermus caldophilus
Biochem.Biophys.Res.Commun., 347, 2006
1PIB
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BU of 1pib by Molmil
Solution structure of DNA containing CPD opposited by GA
分子名称: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3'
著者Lee, J.H, Park, C.J, Shin, J.S, Choi, B.S.
登録日2003-05-30
公開日2004-05-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex.
Nucleic Acids Res., 32, 2004
6JQS
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BU of 6jqs by Molmil
Structure of Transcription factor, GerE
分子名称: DNA-binding response regulator
著者Lee, J.H, Lee, C.W.
登録日2019-04-01
公開日2019-04-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure of a transcription factor, GerE (PaGerE), from spore-forming bacterium Paenisporosarcina sp. TG-14.
Biochem.Biophys.Res.Commun., 513, 2019
5AWN
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BU of 5awn by Molmil
Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC176 Fab
分子名称: Heavy chain of 3BC176 Fab, Light chain of 3BC176 Fab
著者Lee, J.H, Wilson, I.A, Ward, A.B.
登録日2015-07-06
公開日2015-11-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike.
Nat Commun, 6, 2015
5CCK
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BU of 5cck by Molmil
Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC315 Fab
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Antibody 3BC315 Fab heavy chain, Antibody 3BC315 Fab light chain
著者Lee, J.H, Ward, A.B, Wilson, I.A.
登録日2015-07-02
公開日2015-10-07
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike.
Nat Commun, 6, 2015
6IFH
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BU of 6ifh by Molmil
Unphosphorylated Spo0F from Paenisporosarcina sp. TG-14
分子名称: MAGNESIUM ION, Sporulation initiation phosphotransferase F
著者Lee, J.H, Lee, C.W.
登録日2018-09-20
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of unphosphorylated Spo0F from Paenisporosarcina sp. TG-14, a psychrophilic bacterium isolated from an Antarctic glacier
Biodesign, 6(4), 2019

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