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PDB: 489 results

8IQ6
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Cryo-EM structure of Latanoprost-bound prostaglandin-F2-alpha receptor-miniGq-Nb35 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Lv, X, Gao, K, Nie, J, Zhang, X, Zhang, S, Ren, Y, Li, Q, Huang, J, Liu, L, Zhang, X, Sun, X, Zhang, W, Liu, X.
Deposit date:2023-03-15
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of human prostaglandin F 2 alpha receptor reveal the mechanism of ligand and G protein selectivity.
Nat Commun, 14, 2023
8IQ4
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BU of 8iq4 by Molmil
Cryo-EM structure of Carboprost-bound prostaglandin-F2-alpha receptor-miniGq-Nb35 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Lv, X, Gao, K, Nie, J, Zhang, X, Zhang, S, Ren, Y, Li, Q, Huang, J, Liu, L, Zhang, X, Sun, X, Zhang, W, Liu, X.
Deposit date:2023-03-15
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structures of human prostaglandin F 2 alpha receptor reveal the mechanism of ligand and G protein selectivity.
Nat Commun, 14, 2023
4GM3
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BU of 4gm3 by Molmil
Crystal structure of human WD repeat domain 5 with compound MM-101
Descriptor: MM-101, WD repeat-containing protein 5
Authors:Karatas, H, Townsend, E.C, Chen, Y, Bernard, D, Cao, F, Liu, L, Lei, M, Dou, Y, Wang, S.
Deposit date:2012-08-15
Release date:2013-07-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.393 Å)
Cite:High-affinity, small-molecule peptidomimetic inhibitors of MLL1/WDR5 protein-protein interaction.
J.Am.Chem.Soc., 135, 2013
6KFI
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BU of 6kfi by Molmil
NMR solution structure of the 1:1 complex of Tel26 G-quadruplex and a tripodal cationic fluorescent probe NBTE
Descriptor: 4,4',4''-(nitrilotris(benzene-4,1-diyl))tris(1-ethylpyridin-1-ium) iodide, G-quadruplex DNA (26-MER)
Authors:Liu, W, Liu, L.Y, Mao, Z.W.
Deposit date:2019-07-07
Release date:2020-07-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Quantitative Detection of G-Quadruplex DNA in Live Cells Based on Photon Counts and Complex Structure Discrimination.
Angew.Chem.Int.Ed.Engl., 59, 2020
6KFJ
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BU of 6kfj by Molmil
NMR solution structure of the 1:1 complex of wtTel26 G-quadruplex and a tripodal cationic fluorescent probe NBTE
Descriptor: 4,4',4''-(nitrilotris(benzene-4,1-diyl))tris(1-ethylpyridin-1-ium) iodide, G-quadruplex DNA wtTel26
Authors:Liu, W, Liu, L.Y, Mao, Z.W.
Deposit date:2019-07-07
Release date:2020-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Quantitative Detection of G-Quadruplex DNA in Live Cells Based on Photon Counts and Complex Structure Discrimination.
Angew.Chem.Int.Ed.Engl., 59, 2020
5HGZ
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BU of 5hgz by Molmil
Crystal structure of human Naa60 in complex with acetyl-CoA
Descriptor: ACETYL COENZYME *A, MALONIC ACID, N-alpha-acetyltransferase 60
Authors:Chen, J.Y, Liu, L, Yun, C.H.
Deposit date:2016-01-09
Release date:2016-09-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.383 Å)
Cite:Structure and function of human Naa60 (NatF), a Golgi-localized bi-functional acetyltransferase
Sci Rep, 6, 2016
5HH1
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BU of 5hh1 by Molmil
Crystal structure of human Naa60 mutant - F34A in complex with CoA
Descriptor: COENZYME A, N-alpha-acetyltransferase 60
Authors:Chen, J.Y, Liu, L, Yun, C.H.
Deposit date:2016-01-09
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structure and function of human Naa60 (NatF), a Golgi-localized bi-functional acetyltransferase
Sci Rep, 6, 2016
6B17
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Design of a short thermally stable alpha-helix embedded in a macrocycle
Descriptor: 3,3'-dimethyl-1,1'-biphenyl, Capped-strapped peptide
Authors:Wu, H, Acharyya, A, Wu, Y, Liu, L, Jo, H, Gai, F, DeGrado, W.F.
Deposit date:2017-09-17
Release date:2018-02-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Design of a Short Thermally Stable alpha-Helix Embedded in a Macrocycle.
Chembiochem, 19, 2018
4J4G
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Structure of P51G Cyanovirin-N swapped tetramer in the C2 space group
Descriptor: Cyanovirin-N
Authors:Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
Deposit date:2013-02-06
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J4F
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Structure of P51G Cyanovirin-N swapped tetramer in the P212121 space group
Descriptor: Cyanovirin-N
Authors:Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
Deposit date:2013-02-06
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J4E
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BU of 4j4e by Molmil
Structure of P51G Cyanovirin-N swapped trimer in the P212121 space group
Descriptor: Cyanovirin-N
Authors:Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
Deposit date:2013-02-06
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J4C
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BU of 4j4c by Molmil
Structure of P51G Cyanovirin-N swapped dimer in the P3221 space group
Descriptor: Cyanovirin-N
Authors:Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
Deposit date:2013-02-06
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J4D
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BU of 4j4d by Molmil
Structure of P51G Cyanovirin-N swapped dimer in the P21212 space group
Descriptor: Cyanovirin-N
Authors:Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
Deposit date:2013-02-06
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
5FFE
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BU of 5ffe by Molmil
CopM in the Ag-bound form (by soaking)
Descriptor: CopM, SILVER ION
Authors:Zhao, S, Wang, X, Liu, L.
Deposit date:2015-12-18
Release date:2016-09-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Structural basis for copper/silver binding by the Synechocystis metallochaperone CopM.
Acta Crystallogr D Struct Biol, 72, 2016
5FW5
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BU of 5fw5 by Molmil
Crystal structure of human G3BP1 in complex with Semliki Forest Virus nsP3-25 comprising two FGDF motives
Descriptor: ACETATE ION, GLYCEROL, NON-STRUCTURAL PROTEIN 3, ...
Authors:Schulte, T, Liu, L, Panas, M.D, Thaa, B, Goette, B, Achour, A, McInerney, G.M.
Deposit date:2016-02-12
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Combined structural, biochemical and cellular evidence demonstrates that both FGDF motifs in alphavirus nsP3 are required for efficient replication.
Open Biol, 6, 2016
7SU3
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BU of 7su3 by Molmil
CryoEM structure of DNA-PK complex VII
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), ...
Authors:Chen, X, Liu, L, Gellert, M, Yang, W.
Deposit date:2021-11-16
Release date:2022-01-12
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
7SUD
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BU of 7sud by Molmil
CryoEM structure of DNA-PK complex VIII
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA-dependent protein kinase catalytic subunit, MAGNESIUM ION, ...
Authors:Chen, X, Liu, L, Gellert, M, Yang, W.
Deposit date:2021-11-16
Release date:2022-01-12
Last modified:2022-01-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
4FLN
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BU of 4fln by Molmil
Crystal structure of plant protease Deg2
Descriptor: Protease Do-like 2, chloroplastic, Unknown peptide
Authors:Gong, W, Liu, L, Sun, R, Gao, F.
Deposit date:2012-06-15
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Arabidopsis deg2 protein reveals an internal PDZ ligand locking the hexameric resting state.
J.Biol.Chem., 287, 2012
8IEJ
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BU of 8iej by Molmil
RNF20-RNF40/hRad6A-Ub/nucleosome complex
Descriptor: DNA (147-MER), E3 ubiquitin-protein ligase BRE1A, E3 ubiquitin-protein ligase BRE1B, ...
Authors:Ai, H, Deng, Z, Sun, M, Du, Y, Pan, M, Liu, L.
Deposit date:2023-02-15
Release date:2023-09-06
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A.
Mol.Cell, 83, 2023
8IEG
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BU of 8ieg by Molmil
Bre1(mRBD-RING)/Rad6-Ub/nucleosome complex
Descriptor: DNA (147-MER), E3 ubiquitin-protein ligase BRE1, Histone H2A type 1-B/E, ...
Authors:Ai, H, Deng, Z, Pan, M, Liu, L.
Deposit date:2023-02-15
Release date:2023-09-06
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A.
Mol.Cell, 83, 2023
4GMB
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BU of 4gmb by Molmil
Crystal structure of human WD repeat domain 5 with compound MM-402
Descriptor: MM-402, WD repeat-containing protein 5
Authors:Karatas, H, Townsend, E.C, Chen, Y, Bernard, D, Cao, F, Liu, L, Lei, M, Dou, Y, Wang, S.
Deposit date:2012-08-15
Release date:2014-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.781 Å)
Cite:Discovery of a Highly Potent, Cell-Permeable Macrocyclic Peptidomimetic (MM-589) Targeting the WD Repeat Domain 5 Protein (WDR5)-Mixed Lineage Leukemia (MLL) Protein-Protein Interaction.
J.Med.Chem., 60, 2017
7CRD
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BU of 7crd by Molmil
Structure of Pseudomonas aeruginosa OdaA
Descriptor: Probable enoyl-CoA hydratase/isomerase
Authors:Zhao, N, Zhao, C, Liu, L, Li, T, Li, C, He, L, Zhu, Y, Song, Y, Bao, R.
Deposit date:2020-08-13
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structural and molecular dynamic studies of Pseudomonas aeruginosa OdaA reveal the regulation role of a C-terminal hinge element.
Biochim Biophys Acta Gen Subj, 1865, 2020
6BTA
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BU of 6bta by Molmil
CypA Mutant - S99T C115S
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Fraser, J.S, Kenner, L.R, Liu, L.
Deposit date:2017-12-06
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rescue of conformational dynamics in enzyme catalysis by directed evolution.
Nat Commun, 9, 2018
7W0N
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BU of 7w0n by Molmil
Cryo-EM structure of a dimeric GPCR-Gi complex with peptide
Descriptor: Apelin receptor early endogenous ligand, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, F, Yue, Y, Wu, L.J, Liu, L.E, Hanson, M.
Deposit date:2021-11-18
Release date:2022-07-27
Method:ELECTRON MICROSCOPY (4.21 Å)
Cite:Structural insight into apelin receptor-G protein stoichiometry.
Nat.Struct.Mol.Biol., 29, 2022
7W0L
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Cryo-EM structure of a dimeric GPCR-Gi complex with small molecule
Descriptor: (1R,2S)-N-[4-(2,6-dimethoxyphenyl)-5-(6-methylpyridin-2-yl)-1,2,4-triazol-3-yl]-1-(5-methylpyrimidin-2-yl)-1-oxidanyl-propane-2-sulfonamide, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Yue, Y, Liu, L.E, Wu, L.J, Xu, F, Hanson, M.
Deposit date:2021-11-18
Release date:2022-07-27
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structural insight into apelin receptor-G protein stoichiometry.
Nat.Struct.Mol.Biol., 29, 2022

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