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PDB: 468 件
2ZDG
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BU of 2zdg by Molmil
Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase, MAGNESIUM ION
著者Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-11-22
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
To be Published
2ZIG
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BU of 2zig by Molmil
Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8
分子名称: Putative modification methylase
著者Morita, R, Ishikawa, H, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-02-15
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8
Proteins, 73, 2008
2YV2
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BU of 2yv2 by Molmil
Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1
分子名称: Succinyl-CoA synthetase alpha chain
著者Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-06
公開日2007-10-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1
To be Published
2Z95
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BU of 2z95 by Molmil
Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
分子名称: GDP-D-mannose dehydratase, GUANOSINE-5'-DIPHOSPHATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-09-18
公開日2008-03-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
To be Published
2EF7
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BU of 2ef7 by Molmil
Crystal structure of ST2348, a hypothetical protein with CBS domains from Sulfolobus tokodaii strain7
分子名称: Hypothetical protein ST2348
著者Agari, Y, Karthe, P, Kumarevel, T, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-21
公開日2007-08-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of ST2348, a CBS domain protein, from hyperthermophilic archaeon Sulfolobus tokodaii
Biochem.Biophys.Res.Commun., 375, 2008
3AAL
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BU of 3aal by Molmil
Crystal Structure of endonuclease IV from Geobacillus kaustophilus
分子名称: CACODYLATE ION, FE (III) ION, Probable endonuclease 4, ...
著者Asano, R, Ishikawa, H, Nakane, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-11-20
公開日2010-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
3AF5
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BU of 3af5 by Molmil
The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii
分子名称: ACETIC ACID, Putative uncharacterized protein PH1404, SULFATE ION, ...
著者Nishida, Y, Ishikawa, H, Nakagawa, N, Masui, R, Kuramitsu, S.
登録日2010-02-23
公開日2010-04-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of an archaeal cleavage and polyadenylation specificity factor subunit from Pyrococcus horikoshii
Proteins, 78, 2010
3AU2
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BU of 3au2 by Molmil
DNA polymerase X from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Ishikawa, H, Wakamatsu, T, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-01-28
公開日2012-01-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AUO
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BU of 3auo by Molmil
DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP
分子名称: 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase beta family (X family), ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-02-11
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
2Z1M
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BU of 2z1m by Molmil
Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
分子名称: GDP-D-mannose dehydratase, GUANOSINE-5'-DIPHOSPHATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-09
公開日2007-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
To be Published
3B0Y
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BU of 3b0y by Molmil
K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-06-17
公開日2012-05-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3B0X
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BU of 3b0x by Molmil
K263A mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
著者Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-06-17
公開日2012-05-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
2YWD
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BU of 2ywd by Molmil
Crystal structure of glutamine amidotransferase
分子名称: Glutamine amidotransferase subunit pdxT
著者Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of glutamine amidotransferase
To be Published
2YWJ
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BU of 2ywj by Molmil
Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
分子名称: Glutamine amidotransferase subunit pdxT
著者Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
to be published
2YZN
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BU of 2yzn by Molmil
Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
分子名称: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8
To be Published
2YYV
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BU of 2yyv by Molmil
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
分子名称: Probable 2-phosphosulfolactate phosphatase
著者Nakagawa, N, Nakamura, Y, Bessho, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-02
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
2DP9
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BU of 2dp9 by Molmil
Crystal Structure of Conserved Hypothetical Protein TTHA0113 from Thermus thermophilus HB8
分子名称: Hypothetical protein TTHA0113
著者Agari, Y, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-05-08
公開日2006-11-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Conserved Hypothetical Protein TTHA0113 from Thermus thermophilus HB8
To be Published
2D66
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BU of 2d66 by Molmil
Aspartate Aminotransferase Mutant MAB
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2D65
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BU of 2d65 by Molmil
Aspartate Aminotransferase Mutant MABC
分子名称: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S.
登録日2005-11-09
公開日2006-11-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
2YWM
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BU of 2ywm by Molmil
Crystal structure of glutaredoxin-like protein from Aquifex aeolicus
分子名称: Glutaredoxin-like protein
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of glutaredoxin-like protein from Aquifex aeolicus
To be Published
2YZY
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BU of 2yzy by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Putative uncharacterized protein TTHA1012
著者Ebihara, A, Watanabe, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2Z10
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BU of 2z10 by Molmil
Crystal structure of putative acetyltransferase
分子名称: Ribosomal-protein-alanine acetyltransferase
著者Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Genetic Encoding of 3-Iodo-l-Tyrosine in Escherichia coli for Single-Wavelength Anomalous Dispersion Phasing in Protein Crystallography
Structure, 17, 2009
2Z07
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BU of 2z07 by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
分子名称: Putative uncharacterized protein TTHA0978
著者Iino, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2YZG
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BU of 2yzg by Molmil
Crystal structure of D-ALA:D-ALA Ligase from Thermus thermophilus HB8
分子名称: D-alanine--D-alanine ligase
著者Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-05
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of D-ALA:D-ALA Ligase from Thermus thermophilus HB8
To be Published
2ZBV
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BU of 2zbv by Molmil
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
分子名称: ADENOSINE, Uncharacterized conserved protein
著者Ebihara, A, Fujimoto, Y, Kagawa, W, Fujikawa, N, Chen, L, Fu, Z.Q, Chrzas, J, Wang, B.C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-10-30
公開日2007-11-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published

221051

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