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PDB: 17 results
1HS4
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BU of 1hs4 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAAU AS PART OF HAIRPIN R(GCGUUAAAUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*UP*AP*AP*AP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Culyba, M, Volkman, H, Krugh, T.R.
Deposit date:2000-12-22
Release date:2003-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Characterization of Six-Nucleotide RNA Hairpin loops: r(UUAAUU), r(UUAAAU), r(UUAACU)
To be Published
1XV0
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BU of 1xv0 by Molmil
Solution NMR structure of RNA internal loop with three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCGAAGCCG
Descriptor: 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P)-3', 5'-R(*GP*GP*UP*GP*GP*AP*GP*GP*CP*U)-3'
Authors:Chen, G, Znosko, B.M, Kennedy, S.D, Krugh, T.R, Turner, D.H.
Deposit date:2004-10-26
Release date:2004-11-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of an RNA Internal Loop with Three Consecutive Sheared GA Pairs
Biochemistry, 44, 2005
1TUT
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BU of 1tut by Molmil
J4/5 Loop from the Candida albicans and Candida dubliniensis Group I Introns
Descriptor: 5'-R(*GP*AP*GP*GP*AP*AP*GP*GP*CP*GP*A)-3', 5'-R(*UP*CP*GP*UP*UP*AP*AP*UP*CP*UP*C)-3'
Authors:Znosko, B.M, Kennedy, S.D, Wille, P.C, Krugh, T.R, Turner, D.H.
Deposit date:2004-06-25
Release date:2004-12-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Features and Thermodynamics of the J4/5 Loop from the Candida albicans and Candida dubliniensis Group I Introns.
Biochemistry, 43, 2004
1HS1
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BU of 1hs1 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAACU AS PART OF HAIRPIN R(GCGUUAACUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*UP*AP*AP*CP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Culyba, M, Volkman, H, Krugh, T.R.
Deposit date:2000-12-22
Release date:2003-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Characterization of Six-Nucleotide RNA Hairpin loops: r(UUAAUU), r(UUAAAU), r(UUAACU)
To be Published
1HS3
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BU of 1hs3 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAUU AS PART OF HAIRPIN R(GCGUUAAUUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*UP*AP*AP*UP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Culyba, M, Volkman, H, Krugh, T.R.
Deposit date:2000-12-22
Release date:2003-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Characterization of Six-Nucleotide RNA Hairpin loops: r(UUAAUU), r(UUAAAU), r(UUAACU)
To be Published
1HS8
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BU of 1hs8 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UCAAUU AS PART OF HAIRPIN R(GCGUCAAUUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*CP*AP*AP*UP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Ricart, B, Huck, M, Krugh, T.R.
Deposit date:2000-12-25
Release date:2003-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Characterization of Six-Nucleotide RNA Hairpin loops r(UCAAUU)
To be Published
1HS2
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BU of 1hs2 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAGU AS PART OF HAIRPIN R(GCGUUAAGUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*UP*AP*AP*GP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Fountain, M.A, Krugh, T.R.
Deposit date:2000-12-22
Release date:2001-08-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural characterization of a six-nucleotide RNA hairpin loop found in Escherichia coli, r(UUAAGU).
Biochemistry, 40, 2001
1MV1
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BU of 1mv1 by Molmil
The Tandem, Sheared PA Pairs in 5'(rGGCPAGCCU)2
Descriptor: 5'-R(*GP*GP*CP*(P5P)P*AP*GP*CP*CP*U)-3'
Authors:Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H.
Deposit date:2002-09-24
Release date:2002-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
1MV2
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BU of 1mv2 by Molmil
The tandem, Face-to-Face AP Pairs in 5'(rGGCAPGCCU)2
Descriptor: 5'-R(*GP*GP*CP*AP*(P5P)P*GP*CP*CP*U)-3'
Authors:Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H.
Deposit date:2002-09-24
Release date:2002-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
1MV6
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BU of 1mv6 by Molmil
The tandem, Sheared PP Pairs in 5'(rGGCPPGCCU)2
Descriptor: 5'-R(*GP*GP*CP*(P5P)P*(P5P)P*GP*CP*CP*U)-3'
Authors:Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H.
Deposit date:2002-09-24
Release date:2002-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
2DD1
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BU of 2dd1 by Molmil
Three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCAAAGCCG
Descriptor: 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*CP*(P5P))-3', 5'-R(*GP*GP*UP*GP*GP*AP*GP*GP*CP*U)-3'
Authors:Chen, G, Kennedy, S.D, Krugh, T.R, Turner, D.H.
Deposit date:2006-01-19
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An Alternating Sheared AA Pair and Elements of Stability for a Single Sheared Purine-Purine Pair Flanked by Sheared GA Pairs in RNA
Biochemistry, 45, 2006
2DD3
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BU of 2dd3 by Molmil
An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: II. The minor conformation with A6/A5/A16 stack
Descriptor: 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P))-3', 5'-R(*GP*GP*UP*GP*AP*AP*GP*GP*CP*U)-3'
Authors:Chen, G, Kennedy, S.D, Krugh, T.R, Turner, D.H.
Deposit date:2006-01-19
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An Alternating Sheared AA Pair and Elements of Stability for a Single Sheared Purine-Purine Pair Flanked by Sheared GA Pairs in RNA
Biochemistry, 45, 2006
2DD2
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BU of 2dd2 by Molmil
An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: I. The major conformation with A6/A15/A16 stack
Descriptor: 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P))-3', 5'-R(*GP*GP*UP*GP*AP*AP*GP*GP*CP*U)-3'
Authors:Chen, G, Kennedy, S.D, Krugh, T.R, Turner, D.H.
Deposit date:2006-01-19
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An Alternating Sheared AA Pair and Elements of Stability for a Single Sheared Purine-Purine Pair Flanked by Sheared GA Pairs in RNA
Biochemistry, 45, 2006
1MUV
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BU of 1muv by Molmil
Sheared A(anti)-A(anti) Base Pairs in a Destabilizing 2x2 Internal Loop: The NMR Structure of 5'(rGGCAAGCCU)2
Descriptor: 5'-R(*GP*GP*CP*AP*AP*GP*CP*CP*U)-3'
Authors:Znosko, B.M, Burkard, M.E, Schroeder, S.J, Krugh, T.R, Turner, D.H.
Deposit date:2002-09-24
Release date:2002-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Sheared Aanti-Aanti Base Pairs in a Destabilizing 2x2 Internal Loop: The NMR Structure of 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
1NTT
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BU of 1ntt by Molmil
5'(dCPCPUPCPCPUPUP)3':(rAGGAGGAAA)5', where P=propynyl
Descriptor: 5'-D(*CP*(5PC)P*(PDU)P*(5PC)P*(5PC)P*(PDU)P*(PDU))-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3'
Authors:Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H.
Deposit date:2003-01-30
Release date:2003-06-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003
1NTQ
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BU of 1ntq by Molmil
5'(dCCUCCUU)3':3'(rAGGAGGAAA)5'
Descriptor: 5'-D(*CP*CP*UP*CP*CP*UP*U)-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3'
Authors:Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H.
Deposit date:2003-01-30
Release date:2003-06-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003
1NTS
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BU of 1nts by Molmil
5'(dCCPUPCPCPUPUP)3':3'(rAGGAGGAAA)5', where P=propynyl
Descriptor: 5'-D(*(5PC)P*(5PC)P*(PDU)P*(5PC)P*(5PC)P*(PDU)P*(PDU))-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3'
Authors:Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H.
Deposit date:2003-01-30
Release date:2003-06-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003

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數據於2024-10-30公開中

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